RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 SRGAP2O75044 1071 aa20.31■□□□□ 0.84
SEMA3B-209ENST00000456560 ERLIN1O75477 346 aa20.31■□□□□ 0.84
SEMA3B-209ENST00000456560 FAM86B2P0C5J1 330 aa20.31■□□□□ 0.84
SEMA3B-209ENST00000456560 VSNL1P62760 191 aa20.31■□□□□ 0.84
SEMA3B-209ENST00000456560 USH1GQ495M9 461 aa20.31■□□□□ 0.84
SEMA3B-209ENST00000456560 CCDC40Q4G0X9 1142 aa20.31■□□□□ 0.84
SEMA3B-209ENST00000456560 TRIM59Q8IWR1 403 aa20.31■□□□□ 0.84
SEMA3B-209ENST00000456560 FAM20AQ96MK3 541 aa20.31■□□□□ 0.84
SEMA3B-209ENST00000456560 SYNPO2Q9UMS6 1093 aa20.31■□□□□ 0.84
SEMA3B-209ENST00000456560 L1RE1Q9UN81 338 aa20.31■□□□□ 0.84
SEMA3B-209ENST00000456560 A0A1W2PRG0 241 aa20.31■□□□□ 0.84
SEMA3B-209ENST00000456560 NOL4O94818 638 aa20.31■□□□□ 0.84
SEMA3B-209ENST00000456560 ERCC3P19447 782 aa20.31■□□□□ 0.84
SEMA3B-209ENST00000456560 RPA1P27694 616 aa20.31■□□□□ 0.84
SEMA3B-209ENST00000456560 WDR93Q6P2C0 686 aa20.31■□□□□ 0.84
SEMA3B-209ENST00000456560 ILDR2Q71H61 639 aa20.31■□□□□ 0.84
SEMA3B-209ENST00000456560 NELFCDQ8IXH7 590 aa20.31■□□□□ 0.84
SEMA3B-209ENST00000456560 ERMNQ8TAM6 284 aa20.31■□□□□ 0.84
SEMA3B-209ENST00000456560 SMCR8Q8TEV9 937 aaPredicted RBP20.31■□□□□ 0.84
SEMA3B-209ENST00000456560 IFIH1Q9BYX4 1025 aaKnown RBP20.31■□□□□ 0.84
SEMA3B-209ENST00000456560 TANGO6Q9C0B7 1094 aa20.31■□□□□ 0.84
SEMA3B-209ENST00000456560 MACROD2A1Z1Q3 448 aa20.3■□□□□ 0.84
SEMA3B-209ENST00000456560 SPDYE3A6NKU9 549 aa20.3■□□□□ 0.84
SEMA3B-209ENST00000456560 USO1O60763 962 aaKnown RBP20.3■□□□□ 0.84
SEMA3B-209ENST00000456560 USP14P54578 494 aa20.3■□□□□ 0.84
SEMA3B-209ENST00000456560 PSMC6P62333 389 aa20.3■□□□□ 0.84
SEMA3B-209ENST00000456560 GPS2Q13227 327 aa20.3■□□□□ 0.84
SEMA3B-209ENST00000456560 MAPK8IP2Q13387 824 aaPredicted RBP20.3■□□□□ 0.84
SEMA3B-209ENST00000456560 MSL3Q8N5Y2 521 aaKnown RBP20.3■□□□□ 0.84
SEMA3B-209ENST00000456560 SYT2Q8N9I0 419 aaPredicted RBP20.3■□□□□ 0.84
SEMA3B-209ENST00000456560 SH2D4AQ9H788 454 aa20.3■□□□□ 0.84
SEMA3B-209ENST00000456560 STK24Q9Y6E0 443 aa20.3■□□□□ 0.84
SEMA3B-209ENST00000456560 PJA2O43164 708 aa20.3■□□□□ 0.84
SEMA3B-209ENST00000456560 CYP3A4P08684 503 aa20.3■□□□□ 0.84
SEMA3B-209ENST00000456560 GIT2Q14161 759 aa20.3■□□□□ 0.84
SEMA3B-209ENST00000456560 EDRF1Q3B7T1 1238 aa20.3■□□□□ 0.84
SEMA3B-209ENST00000456560 HGSNATQ68CP4 663 aa20.3■□□□□ 0.84
SEMA3B-209ENST00000456560 RPGRIP1Q96KN7 1286 aa20.3■□□□□ 0.84
SEMA3B-209ENST00000456560 CEP72Q9P209 647 aa20.3■□□□□ 0.84
SEMA3B-209ENST00000456560 SSU72P8A0A1W2PR75 194 aa20.29■□□□□ 0.84
SEMA3B-209ENST00000456560 MSH4O15457 936 aa20.29■□□□□ 0.84
SEMA3B-209ENST00000456560 TAL1P17542 331 aaPredicted RBP20.29■□□□□ 0.84
SEMA3B-209ENST00000456560 CKAP4Q07065 602 aaKnown RBP20.29■□□□□ 0.84
SEMA3B-209ENST00000456560 RAD51AP2Q09MP3 1159 aa20.29■□□□□ 0.84
SEMA3B-209ENST00000456560 IKQ13123 557 aaPredicted RBP20.29■□□□□ 0.84
SEMA3B-209ENST00000456560 CC2D2BQ6DHV5 1058 aa20.29■□□□□ 0.84
SEMA3B-209ENST00000456560 PPP4R3CPQ6ZMV5 832 aa20.29■□□□□ 0.84
SEMA3B-209ENST00000456560 HDXQ7Z353 690 aa20.29■□□□□ 0.84
SEMA3B-209ENST00000456560 SYN2Q92777 582 aaPredicted RBP20.29■□□□□ 0.84
SEMA3B-209ENST00000456560 VAV3Q9UKW4 847 aa20.29■□□□□ 0.84
SEMA3B-209ENST00000456560 PRR12Q9ULL5 1215 aa20.29■□□□□ 0.84
SEMA3B-209ENST00000456560 YDJCA8MPS7 323 aa20.29■□□□□ 0.84
SEMA3B-209ENST00000456560 TULP2O00295 520 aa20.29■□□□□ 0.84
SEMA3B-209ENST00000456560 PIK3CDO00329 1044 aa20.29■□□□□ 0.84
SEMA3B-209ENST00000456560 AKR1B10O60218 316 aa20.29■□□□□ 0.84
SEMA3B-209ENST00000456560 KRT18P05783 430 aaKnown RBP20.29■□□□□ 0.84
SEMA3B-209ENST00000456560 CACNA2D4Q7Z3S7 1137 aa20.29■□□□□ 0.84
SEMA3B-209ENST00000456560 TRIM58Q8NG06 486 aa20.29■□□□□ 0.84
SEMA3B-209ENST00000456560 TRERF1Q96PN7 1200 aa20.29■□□□□ 0.84
SEMA3B-209ENST00000456560 GBP3Q9H0R5 595 aa20.29■□□□□ 0.84
SEMA3B-209ENST00000456560 DNM3Q9UQ16 869 aa20.29■□□□□ 0.84
SEMA3B-209ENST00000456560 ATAD5Q96QE3 1844 aa20.28■□□□□ 0.84
SEMA3B-209ENST00000456560 CSRNP1Q96S65 589 aa20.28■□□□□ 0.84
SEMA3B-209ENST00000456560 NUCKS1Q9H1E3 243 aaKnown RBP20.28■□□□□ 0.84
SEMA3B-209ENST00000456560 DEF6Q9H4E7 631 aa20.28■□□□□ 0.84
SEMA3B-209ENST00000456560 FAM184BQ9ULE4 1060 aa20.28■□□□□ 0.84
SEMA3B-209ENST00000456560 JRKLQ9Y4A0 524 aa20.28■□□□□ 0.84
SEMA3B-209ENST00000456560 TACC1O75410 805 aa20.27■□□□□ 0.84
SEMA3B-209ENST00000456560 ADAM9Q13443 819 aa20.27■□□□□ 0.84
SEMA3B-209ENST00000456560 FAM83BQ5T0W9 1011 aa20.27■□□□□ 0.84
SEMA3B-209ENST00000456560 EPM2AIP1Q7L775 607 aaPredicted RBP20.27■□□□□ 0.84
SEMA3B-209ENST00000456560 SLC16A10Q8TF71 515 aa20.27■□□□□ 0.84
SEMA3B-209ENST00000456560 BBXQ8WY36 941 aaPredicted RBP20.27■□□□□ 0.84
SEMA3B-209ENST00000456560 MLXIPQ9HAP2 919 aa20.27■□□□□ 0.84
SEMA3B-209ENST00000456560 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.27■□□□□ 0.848e-7■■□□□ 11.8
SEMA3B-209ENST00000456560 CAPN6Q9Y6Q1 641 aa20.27■□□□□ 0.84
SEMA3B-209ENST00000456560 RBAK-RBAKDNI3L0D1 243 aa20.27■□□□□ 0.84
SEMA3B-209ENST00000456560 PDE2AO00408 941 aaPredicted RBP20.27■□□□□ 0.84
SEMA3B-209ENST00000456560 MEIS1O00470 390 aa20.27■□□□□ 0.84
SEMA3B-209ENST00000456560 TLR2O60603 784 aa20.27■□□□□ 0.84
SEMA3B-209ENST00000456560 HOXA13P31271 388 aaPredicted RBP20.27■□□□□ 0.84
SEMA3B-209ENST00000456560 MAGEA1P43355 309 aa20.27■□□□□ 0.84
SEMA3B-209ENST00000456560 CASP5P51878 434 aa20.27■□□□□ 0.84
SEMA3B-209ENST00000456560 PABPC4Q13310 644 aaKnown RBP eCLIP20.27■□□□□ 0.84
SEMA3B-209ENST00000456560 CAPZA3Q96KX2 299 aa20.27■□□□□ 0.84
SEMA3B-209ENST00000456560 POLR3CQ9BUI4 534 aaPredicted RBP20.27■□□□□ 0.84
SEMA3B-209ENST00000456560 LSM14BQ9BX40 385 aaKnown RBP20.27■□□□□ 0.84
SEMA3B-209ENST00000456560 HERC5Q9UII4 1024 aaKnown RBP20.27■□□□□ 0.84
SEMA3B-209ENST00000456560 TRAF3IP3Q9Y228 551 aa20.27■□□□□ 0.84
SEMA3B-209ENST00000456560 PRLRP16471 622 aa20.26■□□□□ 0.83
SEMA3B-209ENST00000456560 TEX2Q8IWB9 1127 aa20.26■□□□□ 0.83
SEMA3B-209ENST00000456560 SUPT20HQ8NEM7 779 aa20.26■□□□□ 0.83
SEMA3B-209ENST00000456560 REEP2Q9BRK0 252 aa20.26■□□□□ 0.83
SEMA3B-209ENST00000456560 ZNF185O15231 689 aa20.26■□□□□ 0.83
SEMA3B-209ENST00000456560 MOCS3O95396 460 aa20.26■□□□□ 0.83
SEMA3B-209ENST00000456560 HOXD13P35453 343 aa20.26■□□□□ 0.83
SEMA3B-209ENST00000456560 KIAA1755Q5JYT7 1200 aa20.26■□□□□ 0.83
SEMA3B-209ENST00000456560 SFMBT2Q5VUG0 894 aa20.26■□□□□ 0.83
SEMA3B-209ENST00000456560 CYP2W1Q8TAV3 490 aa20.26■□□□□ 0.83
SEMA3B-209ENST00000456560 ZHX3Q9H4I2 956 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms