RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 CTDNEP1O95476 244 aa20.53■□□□□ 0.88
PDLIM2-215ENST00000456545 RBM25P49756 843 aaKnown RBP20.53■□□□□ 0.88
PDLIM2-215ENST00000456545 TRIM29Q14134 588 aa20.53■□□□□ 0.88
PDLIM2-215ENST00000456545 ZNF365Q70YC5 407 aa20.53■□□□□ 0.88
PDLIM2-215ENST00000456545 TRIM50Q86XT4 487 aa20.53■□□□□ 0.88
PDLIM2-215ENST00000456545 TBCKQ8TEA7 893 aa20.53■□□□□ 0.88
PDLIM2-215ENST00000456545 TNPO1Q92973 898 aaKnown RBP20.53■□□□□ 0.88
PDLIM2-215ENST00000456545 LRCH3Q96II8 777 aa20.53■□□□□ 0.88
PDLIM2-215ENST00000456545 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.53■□□□□ 0.881e-6■■■■□ 22.3
PDLIM2-215ENST00000456545 WNT8AQ9H1J5 351 aa20.53■□□□□ 0.88
PDLIM2-215ENST00000456545 MTIF3Q9H2K0 278 aaKnown RBP20.53■□□□□ 0.88
PDLIM2-215ENST00000456545 BRMS1Q9HCU9 246 aa20.53■□□□□ 0.88
PDLIM2-215ENST00000456545 ERAP1Q9NZ08 941 aa20.53■□□□□ 0.88
PDLIM2-215ENST00000456545 IPO5O00410 1097 aaKnown RBP20.52■□□□□ 0.88
PDLIM2-215ENST00000456545 PITPNM1O00562 1244 aa20.52■□□□□ 0.88
PDLIM2-215ENST00000456545 SOX1O00570 391 aaPredicted RBP20.52■□□□□ 0.88
PDLIM2-215ENST00000456545 MARK3P27448 753 aa20.52■□□□□ 0.88
PDLIM2-215ENST00000456545 ACTR2P61160 394 aa20.52■□□□□ 0.88
PDLIM2-215ENST00000456545 ZNF200P98182 395 aaPredicted RBP20.52■□□□□ 0.88
PDLIM2-215ENST00000456545 PTK7Q13308 1070 aa20.52■□□□□ 0.88
PDLIM2-215ENST00000456545 NONOQ15233 471 aaKnown RBP eCLIP20.52■□□□□ 0.88
PDLIM2-215ENST00000456545 KRT25Q7Z3Z0 450 aa20.52■□□□□ 0.88
PDLIM2-215ENST00000456545 DEFB128Q7Z7B8 93 aa20.52■□□□□ 0.88
PDLIM2-215ENST00000456545 DAGLBQ8NCG7 672 aa20.52■□□□□ 0.88
PDLIM2-215ENST00000456545 CRYGNQ8WXF5 182 aa20.52■□□□□ 0.88
PDLIM2-215ENST00000456545 PHF20Q9BVI0 1012 aa20.52■□□□□ 0.88
PDLIM2-215ENST00000456545 FTOQ9C0B1 505 aaKnown RBP eCLIP20.52■□□□□ 0.88
PDLIM2-215ENST00000456545 RNPEPQ9H4A4 650 aa20.52■□□□□ 0.88
PDLIM2-215ENST00000456545 TBC1D22BQ9NU19 505 aa20.52■□□□□ 0.88
PDLIM2-215ENST00000456545 ST18O60284 1047 aa20.51■□□□□ 0.87
PDLIM2-215ENST00000456545 IQCF3P0C7M6 154 aa20.51■□□□□ 0.87
PDLIM2-215ENST00000456545 CIITAP33076 1130 aa20.51■□□□□ 0.87
PDLIM2-215ENST00000456545 RFC2P35250 354 aa20.51■□□□□ 0.87
PDLIM2-215ENST00000456545 ITGB3BPQ13352 177 aaPredicted RBP20.51■□□□□ 0.87
PDLIM2-215ENST00000456545 RABEP1Q15276 862 aa20.51■□□□□ 0.87
PDLIM2-215ENST00000456545 TMEM240Q5SV17 173 aa20.51■□□□□ 0.87
PDLIM2-215ENST00000456545 CCDC83Q8IWF9 413 aa20.51■□□□□ 0.87
PDLIM2-215ENST00000456545 AFAP1L1Q8TED9 768 aa20.51■□□□□ 0.87
PDLIM2-215ENST00000456545 SETD4Q9NVD3 440 aa20.51■□□□□ 0.87
PDLIM2-215ENST00000456545 IGLV3-22A0A075B6J6 115 aa20.5■□□□□ 0.87
PDLIM2-215ENST00000456545 BACH1O14867 736 aa20.5■□□□□ 0.87
PDLIM2-215ENST00000456545 C16orf59Q7L2K0 433 aa20.5■□□□□ 0.87
PDLIM2-215ENST00000456545 NSUN7Q8NE18 718 aaKnown RBP20.5■□□□□ 0.87
PDLIM2-215ENST00000456545 KIF2CQ99661 725 aa20.5■□□□□ 0.87
PDLIM2-215ENST00000456545 SH2B1Q9NRF2 756 aaPredicted RBP20.5■□□□□ 0.87
PDLIM2-215ENST00000456545 SAMM50Q9Y512 469 aa20.5■□□□□ 0.87
PDLIM2-215ENST00000456545 GTF3C3Q9Y5Q9 886 aa20.5■□□□□ 0.87
PDLIM2-215ENST00000456545 KAT6AQ92794 2004 aa20.49■□□□□ 0.87
PDLIM2-215ENST00000456545 PFKMP08237 780 aa20.49■□□□□ 0.87
PDLIM2-215ENST00000456545 ACTN1P12814 892 aa20.49■□□□□ 0.87
PDLIM2-215ENST00000456545 FDPSP14324 419 aaKnown RBP20.49■□□□□ 0.87
PDLIM2-215ENST00000456545 SELPP16109 830 aa20.49■□□□□ 0.87
PDLIM2-215ENST00000456545 STAT5BP51692 787 aa20.49■□□□□ 0.87
PDLIM2-215ENST00000456545 FOSBP53539 338 aa20.49■□□□□ 0.87
PDLIM2-215ENST00000456545 FAM160B1Q5W0V3 765 aa20.49■□□□□ 0.87
PDLIM2-215ENST00000456545 MIS18BP1Q6P0N0 1132 aa20.49■□□□□ 0.87
PDLIM2-215ENST00000456545 LRRC8DQ7L1W4 858 aa20.49■□□□□ 0.87
PDLIM2-215ENST00000456545 OTOP2Q7RTS6 562 aa20.49■□□□□ 0.87
PDLIM2-215ENST00000456545 GJB4Q9NTQ9 266 aa20.49■□□□□ 0.87
PDLIM2-215ENST00000456545 NRCAMQ92823 1304 aa20.49■□□□□ 0.87
PDLIM2-215ENST00000456545 TRIP12Q14669 1992 aaPredicted RBP20.48■□□□□ 0.87
PDLIM2-215ENST00000456545 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.48■□□□□ 0.87
PDLIM2-215ENST00000456545 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.48■□□□□ 0.87
PDLIM2-215ENST00000456545 ZBBXA8MT70 800 aa20.48■□□□□ 0.87
PDLIM2-215ENST00000456545 TREHO43280 583 aa20.48■□□□□ 0.87
PDLIM2-215ENST00000456545 JAK2O60674 1132 aa20.48■□□□□ 0.87
PDLIM2-215ENST00000456545 PARNO95453 639 aaKnown RBP20.48■□□□□ 0.87
PDLIM2-215ENST00000456545 CKBP12277 381 aa20.48■□□□□ 0.87
PDLIM2-215ENST00000456545 KRT2P35908 639 aa20.48■□□□□ 0.87
PDLIM2-215ENST00000456545 THPOP40225 353 aa20.48■□□□□ 0.87
PDLIM2-215ENST00000456545 PPFIA1Q13136 1202 aa20.48■□□□□ 0.87
PDLIM2-215ENST00000456545 INF2Q27J81 1249 aa20.48■□□□□ 0.87
PDLIM2-215ENST00000456545 TRPC6Q9Y210 931 aa20.48■□□□□ 0.87
PDLIM2-215ENST00000456545 EMSYQ7Z589 1322 aa20.48■□□□□ 0.87
PDLIM2-215ENST00000456545 M0R2N6 131 aa20.47■□□□□ 0.87
PDLIM2-215ENST00000456545 MARCH6O60337 910 aa20.47■□□□□ 0.87
PDLIM2-215ENST00000456545 LGR5O75473 907 aa20.47■□□□□ 0.87
PDLIM2-215ENST00000456545 IGBP1P78318 339 aa20.47■□□□□ 0.87
PDLIM2-215ENST00000456545 KRT76Q01546 638 aa20.47■□□□□ 0.87
PDLIM2-215ENST00000456545 HIC1Q14526 733 aa20.47■□□□□ 0.87
PDLIM2-215ENST00000456545 LETM2Q2VYF4 491 aa20.47■□□□□ 0.87
PDLIM2-215ENST00000456545 PIK3AP1Q6ZUJ8 805 aa20.47■□□□□ 0.87
PDLIM2-215ENST00000456545 PLPPR4Q7Z2D5 763 aa20.47■□□□□ 0.87
PDLIM2-215ENST00000456545 SERINC5Q86VE9 423 aa20.47■□□□□ 0.87
PDLIM2-215ENST00000456545 CKAP2LQ8IYA6 745 aa20.47■□□□□ 0.87
PDLIM2-215ENST00000456545 FAM184AQ8NB25 1140 aa20.47■□□□□ 0.87
PDLIM2-215ENST00000456545 IL27Q8NEV9 243 aa20.47■□□□□ 0.87
PDLIM2-215ENST00000456545 HERVK_113Q902F9 699 aa20.47■□□□□ 0.87
PDLIM2-215ENST00000456545 DHX38Q92620 1227 aaKnown RBP20.47■□□□□ 0.87
PDLIM2-215ENST00000456545 CTAGE1Q96RT6 745 aa20.47■□□□□ 0.87
PDLIM2-215ENST00000456545 LLPHQ9BRT6 129 aaKnown RBP20.47■□□□□ 0.87
PDLIM2-215ENST00000456545 DHX15O43143 795 aaKnown RBP20.46■□□□□ 0.87
PDLIM2-215ENST00000456545 GAS7O60861 476 aa20.46■□□□□ 0.87
PDLIM2-215ENST00000456545 ATG7O95352 703 aa20.46■□□□□ 0.87
PDLIM2-215ENST00000456545 CCNE2O96020 404 aa20.46■□□□□ 0.87
PDLIM2-215ENST00000456545 PSAPP07602 524 aa20.46■□□□□ 0.87
PDLIM2-215ENST00000456545 SAFBQ15424 915 aaKnown RBP eCLIP20.46■□□□□ 0.87
PDLIM2-215ENST00000456545 NPY5RQ15761 445 aa20.46■□□□□ 0.87
PDLIM2-215ENST00000456545 GRIK4Q16099 956 aa20.46■□□□□ 0.87
PDLIM2-215ENST00000456545 ZNF618Q5T7W0 954 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms