RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 TCEAL5Q5H9L2 206 aa13.76□□□□□ -0.21
LMCD1-206ENST00000456506 POTEBQ6S5H4 581 aa13.76□□□□□ -0.21
LMCD1-206ENST00000456506 RPAINQ86UA6 219 aa13.76□□□□□ -0.21
LMCD1-206ENST00000456506 PABPC5Q96DU9 382 aaKnown RBP13.76□□□□□ -0.21
LMCD1-206ENST00000456506 H3BQ06 376 aaPredicted RBP13.75□□□□□ -0.21
LMCD1-206ENST00000456506 PIK3CDO00329 1044 aa13.75□□□□□ -0.21
LMCD1-206ENST00000456506 FIBPO43427 364 aa13.75□□□□□ -0.21
LMCD1-206ENST00000456506 UPP2O95045 317 aa13.75□□□□□ -0.21
LMCD1-206ENST00000456506 ZP2Q05996 745 aa13.75□□□□□ -0.21
LMCD1-206ENST00000456506 TRAF1Q13077 416 aa13.75□□□□□ -0.21
LMCD1-206ENST00000456506 PTPROQ16827 1216 aa13.75□□□□□ -0.21
LMCD1-206ENST00000456506 PUS10Q3MIT2 529 aaKnown RBP13.75□□□□□ -0.21
LMCD1-206ENST00000456506 GNPTABQ3T906 1256 aa13.75□□□□□ -0.21
LMCD1-206ENST00000456506 PCNX4Q63HM2 1172 aa13.75□□□□□ -0.21
LMCD1-206ENST00000456506 RUFY4Q6ZNE9 571 aa13.75□□□□□ -0.21
LMCD1-206ENST00000456506 CRIPAKQ8N1N5 446 aa13.75□□□□□ -0.21
LMCD1-206ENST00000456506 EXOC6Q8TAG9 804 aa13.75□□□□□ -0.21
LMCD1-206ENST00000456506 IGDCC4Q8TDY8 1250 aa13.75□□□□□ -0.21
LMCD1-206ENST00000456506 APBB2Q92870 758 aa13.75□□□□□ -0.21
LMCD1-206ENST00000456506 ZNF689Q96CS4 500 aaPredicted RBP13.75□□□□□ -0.21
LMCD1-206ENST00000456506 YME1L1Q96TA2 773 aa13.75□□□□□ -0.21
LMCD1-206ENST00000456506 SENP7Q9BQF6 1050 aa13.75□□□□□ -0.21
LMCD1-206ENST00000456506 RTEL1Q9NZ71 1219 aa13.75□□□□□ -0.21
LMCD1-206ENST00000456506 E7EWF7 191 aa13.74□□□□□ -0.21
LMCD1-206ENST00000456506 NOP56O00567 594 aaKnown RBP13.74□□□□□ -0.21
LMCD1-206ENST00000456506 IFIT3O14879 490 aaKnown RBP13.74□□□□□ -0.21
LMCD1-206ENST00000456506 ATP9AO75110 1047 aa13.74□□□□□ -0.21
LMCD1-206ENST00000456506 KCNA2P16389 499 aa13.74□□□□□ -0.21
LMCD1-206ENST00000456506 COL9A3Q14050 684 aaPredicted RBP13.74□□□□□ -0.21
LMCD1-206ENST00000456506 MARCH8Q5T0T0 291 aa13.74□□□□□ -0.21
LMCD1-206ENST00000456506 TTC22Q5TAA0 569 aa13.74□□□□□ -0.21
LMCD1-206ENST00000456506 MB21D2Q8IYB1 491 aaPredicted RBP13.74□□□□□ -0.21
LMCD1-206ENST00000456506 CLP1Q92989 425 aaKnown RBP13.74□□□□□ -0.21
LMCD1-206ENST00000456506 IFIH1Q9BYX4 1025 aaKnown RBP13.74□□□□□ -0.21
LMCD1-206ENST00000456506 NSUN3Q9H649 340 aaKnown RBP13.74□□□□□ -0.21
LMCD1-206ENST00000456506 TECTAO75443 2155 aa13.73□□□□□ -0.21
LMCD1-206ENST00000456506 NRCAMQ92823 1304 aa13.73□□□□□ -0.21
LMCD1-206ENST00000456506 GSTTP1A0A1W2PQM5 241 aa13.73□□□□□ -0.21
LMCD1-206ENST00000456506 MBLAC1A4D2B0 266 aaPredicted RBP13.73□□□□□ -0.21
LMCD1-206ENST00000456506 GRM6O15303 877 aa13.73□□□□□ -0.21
LMCD1-206ENST00000456506 ARHGAP4P98171 946 aa13.73□□□□□ -0.21
LMCD1-206ENST00000456506 DLX2Q07687 328 aaPredicted RBP13.73□□□□□ -0.21
LMCD1-206ENST00000456506 CAMK1Q14012 370 aa13.73□□□□□ -0.21
LMCD1-206ENST00000456506 LPIN1Q14693 890 aa13.73□□□□□ -0.21
LMCD1-206ENST00000456506 WTAPQ15007 396 aa13.73□□□□□ -0.21
LMCD1-206ENST00000456506 USP17L6PQ6QN14 398 aa13.73□□□□□ -0.21
LMCD1-206ENST00000456506 LINC01599Q8WXQ3 324 aa13.73□□□□□ -0.21
LMCD1-206ENST00000456506 MAP3K14Q99558 947 aa13.73□□□□□ -0.21
LMCD1-206ENST00000456506 SPZ1Q9BXG8 430 aa13.73□□□□□ -0.21
LMCD1-206ENST00000456506 ADGRA3Q8IWK6 1321 aa13.72□□□□□ -0.21
LMCD1-206ENST00000456506 GNAT1P11488 350 aa13.72□□□□□ -0.21
LMCD1-206ENST00000456506 ITGB5P18084 799 aa13.72□□□□□ -0.21
LMCD1-206ENST00000456506 CHMLP26374 656 aa13.72□□□□□ -0.21
LMCD1-206ENST00000456506 SMARCA1P28370 1054 aa13.72□□□□□ -0.21
LMCD1-206ENST00000456506 TCF7P36402 384 aaPredicted RBP13.72□□□□□ -0.21
LMCD1-206ENST00000456506 UTP14CQ5TAP6 766 aaKnown RBP13.72□□□□□ -0.21
LMCD1-206ENST00000456506 XRRA1Q6P2D8 792 aa13.72□□□□□ -0.21
LMCD1-206ENST00000456506 IL17RAQ96F46 866 aa13.72□□□□□ -0.21
LMCD1-206ENST00000456506 LY9Q9HBG7 655 aa13.72□□□□□ -0.21
LMCD1-206ENST00000456506 PRKAG3Q9UGI9 489 aa13.72□□□□□ -0.21
LMCD1-206ENST00000456506 ZNF215Q9UL58 517 aaPredicted RBP13.72□□□□□ -0.21
LMCD1-206ENST00000456506 U3KPZ7 1027 aaPredicted RBP13.72□□□□□ -0.21
LMCD1-206ENST00000456506 USP34Q70CQ2 3546 aa13.72□□□□□ -0.21
LMCD1-206ENST00000456506 ENPP3O14638 875 aa13.71□□□□□ -0.21
LMCD1-206ENST00000456506 TBX10O75333 385 aa13.71□□□□□ -0.21
LMCD1-206ENST00000456506 DGKIO75912 1065 aa13.71□□□□□ -0.21
LMCD1-206ENST00000456506 RB1P06400 928 aa13.71□□□□□ -0.21
LMCD1-206ENST00000456506 GHRP10912 638 aa13.71□□□□□ -0.21
LMCD1-206ENST00000456506 ALADP13716 330 aa13.71□□□□□ -0.21
LMCD1-206ENST00000456506 BMPR1AP36894 532 aa13.71□□□□□ -0.21
LMCD1-206ENST00000456506 HYAL1Q12794 435 aa13.71□□□□□ -0.21
LMCD1-206ENST00000456506 TRDNQ13061 729 aa13.71□□□□□ -0.21
LMCD1-206ENST00000456506 SMAD2Q15796 467 aaKnown RBP13.71□□□□□ -0.21
LMCD1-206ENST00000456506 FBXO47Q5MNV8 452 aa13.71□□□□□ -0.21
LMCD1-206ENST00000456506 RTN4RL1Q86UN2 441 aaPredicted RBP13.71□□□□□ -0.21
LMCD1-206ENST00000456506 ZNF654Q8IZM8 581 aa13.71□□□□□ -0.21
LMCD1-206ENST00000456506 FIBCD1Q8N539 461 aa13.71□□□□□ -0.21
LMCD1-206ENST00000456506 NCOA7Q8NI08 942 aa13.71□□□□□ -0.21
LMCD1-206ENST00000456506 PIBF1Q8WXW3 757 aa13.71□□□□□ -0.21
LMCD1-206ENST00000456506 GPRASP2Q96D09 838 aa13.71□□□□□ -0.21
LMCD1-206ENST00000456506 MYL10Q9BUA6 226 aa13.71□□□□□ -0.21
LMCD1-206ENST00000456506 LMAN2LQ9H0V9 348 aa13.71□□□□□ -0.21
LMCD1-206ENST00000456506 AGO3Q9H9G7 860 aaKnown RBP13.71□□□□□ -0.21
LMCD1-206ENST00000456506 PIEZO1Q92508 2521 aa13.7□□□□□ -0.22
LMCD1-206ENST00000456506 SGSM2O43147 1006 aa13.7□□□□□ -0.22
LMCD1-206ENST00000456506 DCXO43602 365 aa13.7□□□□□ -0.22
LMCD1-206ENST00000456506 PLEKHA8P1O95397 391 aa13.7□□□□□ -0.22
LMCD1-206ENST00000456506 DNAJB1P25685 340 aa13.7□□□□□ -0.22
LMCD1-206ENST00000456506 SSTR3P32745 418 aaPredicted RBP13.7□□□□□ -0.22
LMCD1-206ENST00000456506 CTNNB1P35222 781 aa13.7□□□□□ -0.22
LMCD1-206ENST00000456506 GTF2F1P35269 517 aaKnown RBP eCLIP13.7□□□□□ -0.22
LMCD1-206ENST00000456506 IRS1P35568 1242 aa13.7□□□□□ -0.22
LMCD1-206ENST00000456506 SP4Q02446 784 aa13.7□□□□□ -0.22
LMCD1-206ENST00000456506 TAF2Q6P1X5 1199 aa13.7□□□□□ -0.22
LMCD1-206ENST00000456506 ADHFE1Q8IWW8 467 aa13.7□□□□□ -0.22
LMCD1-206ENST00000456506 SRBD1Q8N5C6 995 aaKnown RBP13.7□□□□□ -0.22
LMCD1-206ENST00000456506 MAP4K1Q92918 833 aa13.7□□□□□ -0.22
LMCD1-206ENST00000456506 ZBTB10Q96DT7 871 aa13.7□□□□□ -0.22
LMCD1-206ENST00000456506 PCYT2Q99447 389 aa13.7□□□□□ -0.22
LMCD1-206ENST00000456506 CLDND1Q9NY35 253 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms