RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 ZNF362Q5T0B9 420 aaPredicted RBP4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 CFAP58Q5T655 872 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 GALNT17Q6IS24 598 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 ZNF662Q6ZS27 426 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 ECHDC2Q86YB7 292 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 ZSCAN29Q8IWY8 852 aaPredicted RBP4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 LRRC57Q8N9N7 239 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 CCDC63Q8NA47 563 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 RETREG2Q8NC44 543 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 SEC14L1Q92503 715 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 DENND2DQ9H6A0 471 aaPredicted RBP4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 ARHGEF3Q9NR81 526 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 LRRC42Q9Y546 428 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 C5P01031 1676 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 TBX10O75333 385 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 OAS1P00973 400 aaKnown RBP4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 PCSK6P29122 969 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 NF2P35240 595 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 SLC29A2Q14542 456 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 RRAGBQ5VZM2 374 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 OLFM4Q6UX06 510 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 VSTM1Q6UX27 236 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 METTL13Q8N6R0 699 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 ABTB2Q8N961 1025 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 DNAJC1Q96KC8 554 aaKnown RBP4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 SPAG5Q96R06 1193 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 IFIH1Q9BYX4 1025 aaKnown RBP4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 KBTBD4Q9NVX7 518 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 BCS1LQ9Y276 419 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 GLI3P10071 1580 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 RPTORQ8N122 1335 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 F8VZ95 297 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 ZNF213O14771 459 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 MAGEB3O15480 346 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 PRKCIP41743 596 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 WDR4P57081 412 aaKnown RBP4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 SARNPP82979 210 aaKnown RBP4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 RFWD3Q6PCD5 774 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 B4GALNT2Q8NHY0 566 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 APPBP2Q92624 585 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 XPO6Q96QU8 1125 aaKnown RBP4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 ACP6Q9NPH0 428 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 DBR1Q9UK59 544 aaKnown RBP4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 GRID1Q9ULK0 1009 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 CORO1CQ9ULV4 474 aaPredicted RBP4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 ATXN2Q99700 1313 aaKnown RBP4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 ANO9A1A5B4 782 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 EYA2O00167 538 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 ITGBL1O95965 494 aaPredicted RBP4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 HMGB1P09429 215 aaKnown RBP4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 ACTN1P12814 892 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 PDE6AP16499 860 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 ATP4AP20648 1035 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 KCNJ1P48048 391 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 BNIP1Q12981 228 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 HSF5Q4G112 596 aaPredicted RBP4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 DZIP3Q86Y13 1208 aaKnown RBP4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 ENAHQ8N8S7 591 aaPredicted RBP4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 FANCBQ8NB91 859 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 EHBP1Q8NDI1 1231 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 FAM13CQ8NE31 585 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 TBC1D16Q8TBP0 767 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 RBM46Q8TBY0 533 aaKnown RBP4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 ANKS1AQ92625 1134 aa4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 RBM41Q96IZ5 413 aaKnown RBP4.99□□□□□ -1.61
DEPDC1-202ENST00000456315 ZNF532Q9HCE3 1301 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 SPDYE16A6NNV3 312 aaPredicted RBP4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 UBAP1LF5GYI3 381 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 M0R2N6 131 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 HIP1O00291 1037 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 MMP13P45452 471 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 TRDNQ13061 729 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 RIPK1Q13546 671 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 TTLL12Q14166 644 aaPredicted RBP4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 LRRC41Q15345 812 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 SGSM1Q2NKQ1 1148 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 C8orf74Q6P047 294 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 TTC27Q6P3X3 843 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 TRIML1Q8N9V2 468 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 ZNF579Q8NAF0 562 aaKnown RBP4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 GIMAP8Q8ND71 665 aaPredicted RBP4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 WDR60Q8WVS4 1066 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 NAF1Q96HR8 494 aaKnown RBP4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 PHACTR1Q9C0D0 580 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 DPH5Q9H2P9 285 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 ACBD3Q9H3P7 528 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 PLCB1Q9NQ66 1216 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 HELLSQ9NRZ9 838 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 GGA2Q9UJY4 613 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 PCDHA13Q9Y5I0 950 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 NEO1Q92859 1461 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 CCP110O43303 1012 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 LCA5LO95447 670 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 IRX1P78414 480 aaPredicted RBP4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 ATP2C1P98194 919 aaPredicted RBP4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 ARID5AQ03989 594 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 ECM1Q16610 540 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 CCDC181Q5TID7 509 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 MAATS1Q7Z4T9 603 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 CCDC170Q8IYT3 715 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms