RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 KCNJ6P48051 423 aa20.39■□□□□ 0.85
MSH6-207ENST00000456246 ZNF200P98182 395 aaPredicted RBP20.39■□□□□ 0.85
MSH6-207ENST00000456246 GRIN2CQ14957 1233 aa20.39■□□□□ 0.85
MSH6-207ENST00000456246 TRIM50Q86XT4 487 aa20.39■□□□□ 0.85
MSH6-207ENST00000456246 BICD2Q8TD16 824 aa20.39■□□□□ 0.85
MSH6-207ENST00000456246 TNPO1Q92973 898 aaKnown RBP20.39■□□□□ 0.85
MSH6-207ENST00000456246 RNPEPQ9H4A4 650 aa20.39■□□□□ 0.85
MSH6-207ENST00000456246 SMARCAD1Q9H4L7 1026 aa20.39■□□□□ 0.85
MSH6-207ENST00000456246 ERAP1Q9NZ08 941 aa20.39■□□□□ 0.85
MSH6-207ENST00000456246 THPOP40225 353 aa20.38■□□□□ 0.85
MSH6-207ENST00000456246 ARHGAP4P98171 946 aa20.38■□□□□ 0.85
MSH6-207ENST00000456246 HIC1Q14526 733 aa20.38■□□□□ 0.85
MSH6-207ENST00000456246 NTRK3Q16288 839 aa20.38■□□□□ 0.85
MSH6-207ENST00000456246 PKN1Q16512 942 aa20.38■□□□□ 0.85
MSH6-207ENST00000456246 ZNF618Q5T7W0 954 aa20.38■□□□□ 0.85
MSH6-207ENST00000456246 TRIM22Q8IYM9 498 aa20.38■□□□□ 0.85
MSH6-207ENST00000456246 REXO1Q8N1G1 1221 aaKnown RBP20.38■□□□□ 0.85
MSH6-207ENST00000456246 MAFAQ8NHW3 353 aaPredicted RBP20.38■□□□□ 0.85
MSH6-207ENST00000456246 ZNF274Q96GC6 653 aaPredicted RBP20.38■□□□□ 0.85
MSH6-207ENST00000456246 GAS2L1Q99501 681 aaPredicted RBP20.38■□□□□ 0.85
MSH6-207ENST00000456246 SLC9A2Q9UBY0 812 aa20.38■□□□□ 0.85
MSH6-207ENST00000456246 GBF1Q92538 1859 aa20.38■□□□□ 0.85
MSH6-207ENST00000456246 ABHD14A-ACY1A0A1B0GW23 586 aa20.37■□□□□ 0.85
MSH6-207ENST00000456246 RSPH10B2B2RC85 870 aa20.37■□□□□ 0.85
MSH6-207ENST00000456246 KIF28PB7ZC32 967 aa20.37■□□□□ 0.85
MSH6-207ENST00000456246 MEIS1O00470 390 aa20.37■□□□□ 0.85
MSH6-207ENST00000456246 TREHO43280 583 aa20.37■□□□□ 0.85
MSH6-207ENST00000456246 NBNO60934 754 aa20.37■□□□□ 0.85
MSH6-207ENST00000456246 RSPH10BP0C881 870 aa20.37■□□□□ 0.85
MSH6-207ENST00000456246 ZNF76P36508 570 aa20.37■□□□□ 0.85
MSH6-207ENST00000456246 TOB2Q14106 344 aaPredicted RBP20.37■□□□□ 0.85
MSH6-207ENST00000456246 CPLX2Q6PUV4 134 aaKnown RBP20.37■□□□□ 0.85
MSH6-207ENST00000456246 TRAF7Q6Q0C0 670 aa20.37■□□□□ 0.85
MSH6-207ENST00000456246 GLG1Q92896 1179 aa20.37■□□□□ 0.85
MSH6-207ENST00000456246 WNT8BQ93098 351 aa20.37■□□□□ 0.85
MSH6-207ENST00000456246 PHKBQ93100 1093 aa20.37■□□□□ 0.85
MSH6-207ENST00000456246 PGBD1Q96JS3 809 aa20.37■□□□□ 0.85
MSH6-207ENST00000456246 SLC26A6Q9BXS9 759 aa20.37■□□□□ 0.85
MSH6-207ENST00000456246 NKX2-4Q9H2Z4 354 aa20.37■□□□□ 0.85
MSH6-207ENST00000456246 SH3GLB2Q9NR46 395 aa20.37■□□□□ 0.85
MSH6-207ENST00000456246 PKD2L1Q9P0L9 805 aa20.37■□□□□ 0.85
MSH6-207ENST00000456246 YBX2Q9Y2T7 364 aaKnown RBP20.37■□□□□ 0.85
MSH6-207ENST00000456246 KAT6AQ92794 2004 aa20.37■□□□□ 0.85
MSH6-207ENST00000456246 GSTTP1A0A1W2PQM5 241 aa20.36■□□□□ 0.85
MSH6-207ENST00000456246 RPLP2P05387 115 aaKnown RBP20.36■□□□□ 0.85
MSH6-207ENST00000456246 CYP3A4P08684 503 aa20.36■□□□□ 0.85
MSH6-207ENST00000456246 SETQ01105 290 aaPredicted RBP20.36■□□□□ 0.85
MSH6-207ENST00000456246 GPNMBQ14956 572 aa20.36■□□□□ 0.85
MSH6-207ENST00000456246 PPP2R2DQ66LE6 453 aa20.36■□□□□ 0.85
MSH6-207ENST00000456246 TAF2Q6P1X5 1199 aa20.36■□□□□ 0.85
MSH6-207ENST00000456246 FAM177A1Q8N128 213 aaPredicted RBP20.36■□□□□ 0.85
MSH6-207ENST00000456246 LMBR1Q8WVP7 490 aa20.36■□□□□ 0.85
MSH6-207ENST00000456246 AZI2Q9H6S1 392 aa20.36■□□□□ 0.85
MSH6-207ENST00000456246 SETD4Q9NVD3 440 aa20.36■□□□□ 0.85
MSH6-207ENST00000456246 TMEM260Q9NX78 707 aa20.36■□□□□ 0.85
MSH6-207ENST00000456246 MYO9BQ13459 2157 aa20.36■□□□□ 0.85
MSH6-207ENST00000456246 CPLX1O14810 134 aa20.35■□□□□ 0.85
MSH6-207ENST00000456246 LGR5O75473 907 aa20.35■□□□□ 0.85
MSH6-207ENST00000456246 RABGGTBP53611 331 aa20.35■□□□□ 0.85
MSH6-207ENST00000456246 ANAPC15P60006 121 aa20.35■□□□□ 0.85
MSH6-207ENST00000456246 WDR5P61964 334 aaKnown RBP20.35■□□□□ 0.85
MSH6-207ENST00000456246 ADAM17P78536 824 aa20.35■□□□□ 0.85
MSH6-207ENST00000456246 IKBKEQ14164 716 aa20.35■□□□□ 0.85
MSH6-207ENST00000456246 JAKMIP3Q5VZ66 844 aa20.35■□□□□ 0.85
MSH6-207ENST00000456246 HERC6Q8IVU3 1022 aa20.35■□□□□ 0.85
MSH6-207ENST00000456246 CYP2W1Q8TAV3 490 aa20.35■□□□□ 0.85
MSH6-207ENST00000456246 UPF3BQ9BZI7 483 aaKnown RBP20.35■□□□□ 0.85
MSH6-207ENST00000456246 AGO4Q9HCK5 861 aaKnown RBP20.35■□□□□ 0.85
MSH6-207ENST00000456246 SLC26A2P50443 739 aa20.34■□□□□ 0.85
MSH6-207ENST00000456246 CCT2P78371 535 aaKnown RBP20.34■□□□□ 0.85
MSH6-207ENST00000456246 PPFIA1Q13136 1202 aa20.34■□□□□ 0.85
MSH6-207ENST00000456246 RPAINQ86UA6 219 aa20.34■□□□□ 0.85
MSH6-207ENST00000456246 RSPH3Q86UC2 560 aa20.34■□□□□ 0.85
MSH6-207ENST00000456246 CRYGNQ8WXF5 182 aa20.34■□□□□ 0.85
MSH6-207ENST00000456246 NCOA5Q9HCD5 579 aaKnown RBP20.34■□□□□ 0.85
MSH6-207ENST00000456246 PDRG1Q9NUG6 133 aa20.34■□□□□ 0.85
MSH6-207ENST00000456246 TELO2Q9Y4R8 837 aa20.34■□□□□ 0.85
MSH6-207ENST00000456246 RRN3P2A6NIE6 340 aa20.33■□□□□ 0.85
MSH6-207ENST00000456246 ARP10275 920 aa20.33■□□□□ 0.85
MSH6-207ENST00000456246 ACTR2P61160 394 aa20.33■□□□□ 0.85
MSH6-207ENST00000456246 SSRP1Q08945 709 aaKnown RBP20.33■□□□□ 0.85
MSH6-207ENST00000456246 MBTPS1Q14703 1052 aa20.33■□□□□ 0.85
MSH6-207ENST00000456246 PLPPR4Q7Z2D5 763 aa20.33■□□□□ 0.85
MSH6-207ENST00000456246 PLA2G4DQ86XP0 818 aa20.33■□□□□ 0.85
MSH6-207ENST00000456246 C22orf23Q9BZE7 217 aa20.33■□□□□ 0.85
MSH6-207ENST00000456246 PRDM12Q9H4Q4 367 aa20.33■□□□□ 0.85
MSH6-207ENST00000456246 CHD9Q3L8U1 2897 aa20.32■□□□□ 0.84
MSH6-207ENST00000456246 DEXIO95424 95 aa20.32■□□□□ 0.84
MSH6-207ENST00000456246 MARK3P27448 753 aa20.32■□□□□ 0.84
MSH6-207ENST00000456246 ITGB3BPQ13352 177 aaPredicted RBP20.32■□□□□ 0.84
MSH6-207ENST00000456246 GRIK4Q16099 956 aa20.32■□□□□ 0.84
MSH6-207ENST00000456246 FAM26DQ5JW98 314 aa20.32■□□□□ 0.84
MSH6-207ENST00000456246 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.32■□□□□ 0.84
MSH6-207ENST00000456246 TCEAL9Q9UHQ7 104 aa20.32■□□□□ 0.84
MSH6-207ENST00000456246 TUBE1Q9UJT0 475 aa20.32■□□□□ 0.84
MSH6-207ENST00000456246 IGLV3-22A0A075B6J6 115 aa20.31■□□□□ 0.84
MSH6-207ENST00000456246 MBLAC1A4D2B0 266 aaPredicted RBP20.31■□□□□ 0.84
MSH6-207ENST00000456246 FAM86B1E9PN63 330 aa20.31■□□□□ 0.84
MSH6-207ENST00000456246 TLL1O43897 1013 aa20.31■□□□□ 0.84
MSH6-207ENST00000456246 CDKL5O76039 1030 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms