RNA–Protein interactions for RNA: ENST00000455629.5

CCDC144B-204, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best)

Gene CCDC144B, Length 946 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-204ENST00000455629 MCM5P33992 734 aa20.25■□□□□ 0.83
CCDC144B-204ENST00000455629 PTPROQ16827 1216 aa20.25■□□□□ 0.83
CCDC144B-204ENST00000455629 UTP14CQ5TAP6 766 aaKnown RBP20.25■□□□□ 0.83
CCDC144B-204ENST00000455629 GPRASP2Q96D09 838 aa20.25■□□□□ 0.83
CCDC144B-204ENST00000455629 YME1L1Q96TA2 773 aa20.25■□□□□ 0.83
CCDC144B-204ENST00000455629 MYL10Q9BUA6 226 aa20.25■□□□□ 0.83
CCDC144B-204ENST00000455629 PRC1O43663 620 aa20.24■□□□□ 0.83
CCDC144B-204ENST00000455629 CALM1P0DP23 149 aa20.24■□□□□ 0.83
CCDC144B-204ENST00000455629 CALM2P0DP24 149 aa20.24■□□□□ 0.83
CCDC144B-204ENST00000455629 CALM3P0DP25 149 aa20.24■□□□□ 0.83
CCDC144B-204ENST00000455629 ARHGAP4P98171 946 aa20.24■□□□□ 0.83
CCDC144B-204ENST00000455629 EPC2Q52LR7 807 aa20.24■□□□□ 0.83
CCDC144B-204ENST00000455629 NFXL1Q6ZNB6 911 aa20.24■□□□□ 0.83
CCDC144B-204ENST00000455629 MRPL38Q96DV4 380 aaKnown RBP20.24■□□□□ 0.83
CCDC144B-204ENST00000455629 TMEM87BQ96K49 555 aa20.24■□□□□ 0.83
CCDC144B-204ENST00000455629 PSTPIP2Q9H939 334 aa20.24■□□□□ 0.83
CCDC144B-204ENST00000455629 RAPGEFL1Q9UHV5 662 aa20.24■□□□□ 0.83
CCDC144B-204ENST00000455629 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.23■□□□□ 0.83
CCDC144B-204ENST00000455629 CCDC69A6NI79 296 aa20.23■□□□□ 0.83
CCDC144B-204ENST00000455629 TCF7P36402 384 aaPredicted RBP20.23■□□□□ 0.83
CCDC144B-204ENST00000455629 SP4Q02446 784 aa20.23■□□□□ 0.83
CCDC144B-204ENST00000455629 LEXMQ3ZCV2 418 aa20.23■□□□□ 0.83
CCDC144B-204ENST00000455629 TAF2Q6P1X5 1199 aa20.23■□□□□ 0.83
CCDC144B-204ENST00000455629 RPAINQ86UA6 219 aa20.23■□□□□ 0.83
CCDC144B-204ENST00000455629 IFIH1Q9BYX4 1025 aaKnown RBP20.23■□□□□ 0.83
CCDC144B-204ENST00000455629 TELO2Q9Y4R8 837 aa20.23■□□□□ 0.83
CCDC144B-204ENST00000455629 H3BNC9 293 aa20.22■□□□□ 0.83
CCDC144B-204ENST00000455629 RBAK-RBAKDNI3L0D1 243 aa20.22■□□□□ 0.83
CCDC144B-204ENST00000455629 SH2B2O14492 632 aaPredicted RBP20.22■□□□□ 0.83
CCDC144B-204ENST00000455629 UPP2O95045 317 aa20.22■□□□□ 0.83
CCDC144B-204ENST00000455629 PLEKHA8P1O95397 391 aa20.22■□□□□ 0.83
CCDC144B-204ENST00000455629 LIFRP42702 1097 aa20.22■□□□□ 0.83
CCDC144B-204ENST00000455629 TIGD5Q53EQ6 642 aa20.22■□□□□ 0.83
CCDC144B-204ENST00000455629 SRBD1Q8N5C6 995 aaKnown RBP20.22■□□□□ 0.83
CCDC144B-204ENST00000455629 OSBPL7Q9BZF2 842 aa20.22■□□□□ 0.83
CCDC144B-204ENST00000455629 EPHX3Q9H6B9 360 aa20.22■□□□□ 0.83
CCDC144B-204ENST00000455629 RALGAPA2Q2PPJ7 1873 aa20.22■□□□□ 0.83
CCDC144B-204ENST00000455629 NLRC5Q86WI3 1866 aa20.22■□□□□ 0.83
CCDC144B-204ENST00000455629 KCNA2P16389 499 aa20.21■□□□□ 0.83
CCDC144B-204ENST00000455629 KCNA5P22460 613 aa20.21■□□□□ 0.83
CCDC144B-204ENST00000455629 RSPH3Q86UC2 560 aa20.21■□□□□ 0.83
CCDC144B-204ENST00000455629 TMEM192Q8IY95 271 aa20.21■□□□□ 0.83
CCDC144B-204ENST00000455629 SEPT1Q8WYJ6 367 aa20.21■□□□□ 0.83
CCDC144B-204ENST00000455629 ERAP1Q9NZ08 941 aa20.21■□□□□ 0.83
CCDC144B-204ENST00000455629 SPDYE3A6NKU9 549 aa20.2■□□□□ 0.82
CCDC144B-204ENST00000455629 MAFGO15525 162 aa20.2■□□□□ 0.82
CCDC144B-204ENST00000455629 ATP9AO75110 1047 aa20.2■□□□□ 0.82
CCDC144B-204ENST00000455629 CHRNA1P02708 482 aa20.2■□□□□ 0.82
CCDC144B-204ENST00000455629 ITGB5P18084 799 aa20.2■□□□□ 0.82
CCDC144B-204ENST00000455629 PPFIA1Q13136 1202 aa20.2■□□□□ 0.82
CCDC144B-204ENST00000455629 GPM6BQ13491 265 aa20.2■□□□□ 0.82
CCDC144B-204ENST00000455629 MTMR1Q13613 665 aa20.2■□□□□ 0.82
CCDC144B-204ENST00000455629 PUS10Q3MIT2 529 aaKnown RBP20.2■□□□□ 0.82
CCDC144B-204ENST00000455629 EHMT1Q9H9B1 1298 aa20.2■□□□□ 0.82
CCDC144B-204ENST00000455629 UBIAD1Q9Y5Z9 338 aa20.2■□□□□ 0.82
CCDC144B-204ENST00000455629 SLC12A7Q9Y666 1083 aa20.2■□□□□ 0.82
CCDC144B-204ENST00000455629 RPLP2P05387 115 aaKnown RBP20.19■□□□□ 0.82
CCDC144B-204ENST00000455629 PLA2G5P39877 138 aa20.19■□□□□ 0.82
CCDC144B-204ENST00000455629 TMEM31Q5JXX7 168 aa20.19■□□□□ 0.82
CCDC144B-204ENST00000455629 CMTR1Q8N1G2 835 aaKnown RBP20.19■□□□□ 0.82
CCDC144B-204ENST00000455629 BANK1Q8NDB2 785 aa20.19■□□□□ 0.82
CCDC144B-204ENST00000455629 GLG1Q92896 1179 aa20.19■□□□□ 0.82
CCDC144B-204ENST00000455629 IL17RAQ96F46 866 aa20.19■□□□□ 0.82
CCDC144B-204ENST00000455629 LRFN3Q9BTN0 628 aa20.19■□□□□ 0.82
CCDC144B-204ENST00000455629 LSG1Q9H089 658 aaKnown RBP20.19■□□□□ 0.82
CCDC144B-204ENST00000455629 SMARCAD1Q9H4L7 1026 aa20.19■□□□□ 0.82
CCDC144B-204ENST00000455629 TUBE1Q9UJT0 475 aa20.19■□□□□ 0.82
CCDC144B-204ENST00000455629 GSTTP1A0A1W2PQM5 241 aa20.18■□□□□ 0.82
CCDC144B-204ENST00000455629 MBLAC1A4D2B0 266 aaPredicted RBP20.18■□□□□ 0.82
CCDC144B-204ENST00000455629 SLC27A2O14975 620 aa20.18■□□□□ 0.82
CCDC144B-204ENST00000455629 RXRAP19793 462 aa20.18■□□□□ 0.82
CCDC144B-204ENST00000455629 GRIK4Q16099 956 aa20.18■□□□□ 0.82
CCDC144B-204ENST00000455629 RUFY4Q6ZNE9 571 aa20.18■□□□□ 0.82
CCDC144B-204ENST00000455629 TEX2Q8IWB9 1127 aa20.18■□□□□ 0.82
CCDC144B-204ENST00000455629 FAM178BQ8IXR5 827 aa20.18■□□□□ 0.82
CCDC144B-204ENST00000455629 FIBCD1Q8N539 461 aa20.18■□□□□ 0.82
CCDC144B-204ENST00000455629 FANCBQ8NB91 859 aa20.18■□□□□ 0.82
CCDC144B-204ENST00000455629 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.18■□□□□ 0.82
CCDC144B-204ENST00000455629 FAM122AQ96E09 287 aa20.18■□□□□ 0.82
CCDC144B-204ENST00000455629 ESYT1Q9BSJ8 1104 aa20.18■□□□□ 0.82
CCDC144B-204ENST00000455629 JADE2Q9NQC1 790 aa20.18■□□□□ 0.82
CCDC144B-204ENST00000455629 ARIH1Q9Y4X5 557 aaPredicted RBP20.18■□□□□ 0.82
CCDC144B-204ENST00000455629 GPR37L1O60883 481 aa20.17■□□□□ 0.82
CCDC144B-204ENST00000455629 GHRP10912 638 aa20.17■□□□□ 0.82
CCDC144B-204ENST00000455629 MGAT3Q09327 533 aa20.17■□□□□ 0.82
CCDC144B-204ENST00000455629 LPIN1Q14693 890 aa20.17■□□□□ 0.82
CCDC144B-204ENST00000455629 PTCRAQ6ISU1 281 aaPredicted RBP20.17■□□□□ 0.82
CCDC144B-204ENST00000455629 TMTC3Q6ZXV5 915 aa20.17■□□□□ 0.82
CCDC144B-204ENST00000455629 NEK9Q8TD19 979 aa20.17■□□□□ 0.82
CCDC144B-204ENST00000455629 CD320Q9NPF0 282 aa20.17■□□□□ 0.82
CCDC144B-204ENST00000455629 PCDHA6Q9UN73 950 aa20.17■□□□□ 0.82
CCDC144B-204ENST00000455629 RWDD3Q9Y3V2 267 aa20.17■□□□□ 0.82
CCDC144B-204ENST00000455629 PCDHA8Q9Y5H6 950 aa20.17■□□□□ 0.82
CCDC144B-204ENST00000455629 GRXCR2A6NFK2 248 aa20.16■□□□□ 0.82
CCDC144B-204ENST00000455629 C5orf67F2Z3F1 127 aa20.16■□□□□ 0.82
CCDC144B-204ENST00000455629 PI4K2BG5E9Z4 385 aa20.16■□□□□ 0.82
CCDC144B-204ENST00000455629 RB1P06400 928 aa20.16■□□□□ 0.82
CCDC144B-204ENST00000455629 MARK3P27448 753 aa20.16■□□□□ 0.82
CCDC144B-204ENST00000455629 COL19A1Q14993 1142 aa20.16■□□□□ 0.82
CCDC144B-204ENST00000455629 NECTIN1Q15223 517 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms