RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 POTEFA5A3E0 1075 aa12.65□□□□□ -0.38
TRAF4-206ENST00000454852 EML1O00423 815 aa12.65□□□□□ -0.38
TRAF4-206ENST00000454852 ADCY6O43306 1168 aa12.65□□□□□ -0.38
TRAF4-206ENST00000454852 MSCO60682 206 aa12.65□□□□□ -0.38
TRAF4-206ENST00000454852 LYPLA2O95372 231 aa12.65□□□□□ -0.38
TRAF4-206ENST00000454852 INHAP05111 366 aa12.65□□□□□ -0.38
TRAF4-206ENST00000454852 RPA1P27694 616 aa12.65□□□□□ -0.38
TRAF4-206ENST00000454852 ACTR2P61160 394 aa12.65□□□□□ -0.38
TRAF4-206ENST00000454852 TRIM32Q13049 653 aa12.65□□□□□ -0.38
TRAF4-206ENST00000454852 KRT79Q5XKE5 535 aa12.65□□□□□ -0.38
TRAF4-206ENST00000454852 FBXO46Q6PJ61 603 aaPredicted RBP12.65□□□□□ -0.38
TRAF4-206ENST00000454852 CYFIP1Q7L576 1253 aa12.65□□□□□ -0.38
TRAF4-206ENST00000454852 DHX37Q8IY37 1157 aaKnown RBP12.65□□□□□ -0.38
TRAF4-206ENST00000454852 PPTC7Q8NI37 304 aa12.65□□□□□ -0.38
TRAF4-206ENST00000454852 ERMNQ8TAM6 284 aa12.65□□□□□ -0.38
TRAF4-206ENST00000454852 MRPS27Q92552 414 aaKnown RBP12.65□□□□□ -0.38
TRAF4-206ENST00000454852 SYMPKQ92797 1274 aaKnown RBP12.65□□□□□ -0.38
TRAF4-206ENST00000454852 PYM1Q9BRP8 204 aaKnown RBP12.65□□□□□ -0.38
TRAF4-206ENST00000454852 UPF3AQ9H1J1 476 aaKnown RBP12.65□□□□□ -0.38
TRAF4-206ENST00000454852 BCAS3Q9H6U6 928 aa12.65□□□□□ -0.38
TRAF4-206ENST00000454852 MLXIPQ9HAP2 919 aa12.65□□□□□ -0.38
TRAF4-206ENST00000454852 TUFT1Q9NNX1 390 aa12.65□□□□□ -0.38
TRAF4-206ENST00000454852 DISC1Q9NRI5 854 aa12.65□□□□□ -0.38
TRAF4-206ENST00000454852 TCEAL9Q9UHQ7 104 aa12.65□□□□□ -0.38
TRAF4-206ENST00000454852 DOCK5Q9H7D0 1870 aa12.64□□□□□ -0.39
TRAF4-206ENST00000454852 GSTTP1A0A1W2PQM5 241 aa12.64□□□□□ -0.39
TRAF4-206ENST00000454852 GOLGA6L4A6NEF3 574 aa12.64□□□□□ -0.39
TRAF4-206ENST00000454852 A6NJR5 290 aa12.64□□□□□ -0.39
TRAF4-206ENST00000454852 GADD45BO75293 160 aaPredicted RBP12.64□□□□□ -0.39
TRAF4-206ENST00000454852 LGR5O75473 907 aa12.64□□□□□ -0.39
TRAF4-206ENST00000454852 SLITRK3O94933 977 aa12.64□□□□□ -0.39
TRAF4-206ENST00000454852 P4HBP07237 508 aaKnown RBP12.64□□□□□ -0.39
TRAF4-206ENST00000454852 SPATA31C1P0DKV0 1188 aa12.64□□□□□ -0.39
TRAF4-206ENST00000454852 TXLNAP40222 546 aa12.64□□□□□ -0.39
TRAF4-206ENST00000454852 UBA7P41226 1012 aa12.64□□□□□ -0.39
TRAF4-206ENST00000454852 GJA9P57773 515 aa12.64□□□□□ -0.39
TRAF4-206ENST00000454852 TMEM63BQ5T3F8 832 aa12.64□□□□□ -0.39
TRAF4-206ENST00000454852 MIS18BP1Q6P0N0 1132 aa12.64□□□□□ -0.39
TRAF4-206ENST00000454852 USP49Q70CQ1 688 aa12.64□□□□□ -0.39
TRAF4-206ENST00000454852 MIER3Q7Z3K6 550 aa12.64□□□□□ -0.39
TRAF4-206ENST00000454852 ENGASEQ8NFI3 743 aa12.64□□□□□ -0.39
TRAF4-206ENST00000454852 AFAP1L1Q8TED9 768 aa12.64□□□□□ -0.39
TRAF4-206ENST00000454852 SEPT1Q8WYJ6 367 aa12.64□□□□□ -0.39
TRAF4-206ENST00000454852 EPSTI1Q96J88 318 aa12.64□□□□□ -0.39
TRAF4-206ENST00000454852 GPR20Q99678 358 aa12.64□□□□□ -0.39
TRAF4-206ENST00000454852 NT5C3AQ9H0P0 336 aa12.64□□□□□ -0.39
TRAF4-206ENST00000454852 FAM13BQ9NYF5 915 aa12.64□□□□□ -0.39
TRAF4-206ENST00000454852 PKD2L1Q9P0L9 805 aa12.64□□□□□ -0.39
TRAF4-206ENST00000454852 EMSYQ7Z589 1322 aa12.63□□□□□ -0.39
TRAF4-206ENST00000454852 IGSF9BQ9UPX0 1349 aa12.63□□□□□ -0.39
TRAF4-206ENST00000454852 KDM3AQ9Y4C1 1321 aa12.63□□□□□ -0.39
TRAF4-206ENST00000454852 PP2D1A8MPX8 630 aa12.63□□□□□ -0.39
TRAF4-206ENST00000454852 DKC1O60832 514 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRAF4-206ENST00000454852 PPFIA4O75335 1185 aa12.63□□□□□ -0.39
TRAF4-206ENST00000454852 MBD3O95983 291 aa12.63□□□□□ -0.39
TRAF4-206ENST00000454852 PSAPP07602 524 aa12.63□□□□□ -0.39
TRAF4-206ENST00000454852 SUPT20HL2P0C7V6 817 aa12.63□□□□□ -0.39
TRAF4-206ENST00000454852 XRCC6P12956 609 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRAF4-206ENST00000454852 PFKFB1P16118 471 aa12.63□□□□□ -0.39
TRAF4-206ENST00000454852 CST5P28325 142 aaPredicted RBP12.63□□□□□ -0.39
TRAF4-206ENST00000454852 FAM160A1Q05DH4 1040 aa12.63□□□□□ -0.39
TRAF4-206ENST00000454852 HSDL1Q3SXM5 330 aa12.63□□□□□ -0.39
TRAF4-206ENST00000454852 TMEM119Q4V9L6 283 aa12.63□□□□□ -0.39
TRAF4-206ENST00000454852 NCAPH2Q6IBW4 605 aa12.63□□□□□ -0.39
TRAF4-206ENST00000454852 TLK2Q86UE8 772 aa12.63□□□□□ -0.39
TRAF4-206ENST00000454852 CABP7Q86V35 215 aa12.63□□□□□ -0.39
TRAF4-206ENST00000454852 CATSPER3Q86XQ3 398 aa12.63□□□□□ -0.39
TRAF4-206ENST00000454852 ELOA2Q8IYF1 753 aaPredicted RBP12.63□□□□□ -0.39
TRAF4-206ENST00000454852 FSIP1Q8NA03 581 aa12.63□□□□□ -0.39
TRAF4-206ENST00000454852 COPS5Q92905 334 aa12.63□□□□□ -0.39
TRAF4-206ENST00000454852 ARMC5Q96C12 935 aa12.63□□□□□ -0.39
TRAF4-206ENST00000454852 TIGD1Q96MW7 591 aa12.63□□□□□ -0.39
TRAF4-206ENST00000454852 SPATA33Q96N06 139 aa12.63□□□□□ -0.39
TRAF4-206ENST00000454852 EIF2AK1Q9BQI3 630 aaKnown RBP12.63□□□□□ -0.39
TRAF4-206ENST00000454852 CCDC39Q9UFE4 941 aa12.63□□□□□ -0.39
TRAF4-206ENST00000454852 DDX20Q9UHI6 824 aaKnown RBP12.63□□□□□ -0.39
TRAF4-206ENST00000454852 USP25Q9UHP3 1055 aa12.63□□□□□ -0.39
TRAF4-206ENST00000454852 KCNH3Q9ULD8 1083 aa12.63□□□□□ -0.39
TRAF4-206ENST00000454852 MAFBQ9Y5Q3 323 aaPredicted RBP12.63□□□□□ -0.39
TRAF4-206ENST00000454852 WDR81Q562E7 1941 aa12.62□□□□□ -0.39
TRAF4-206ENST00000454852 DDX39AO00148 427 aaKnown RBP12.62□□□□□ -0.39
TRAF4-206ENST00000454852 CTAGE5O15320 804 aa12.62□□□□□ -0.39
TRAF4-206ENST00000454852 ADAMTS4O75173 837 aa12.62□□□□□ -0.39
TRAF4-206ENST00000454852 MED24O75448 989 aa12.62□□□□□ -0.39
TRAF4-206ENST00000454852 RARBP10826 455 aa12.62□□□□□ -0.39
TRAF4-206ENST00000454852 CCND3P30281 292 aaPredicted RBP12.62□□□□□ -0.39
TRAF4-206ENST00000454852 CDC25AP30304 524 aa12.62□□□□□ -0.39
TRAF4-206ENST00000454852 QARSP47897 775 aaKnown RBP12.62□□□□□ -0.39
TRAF4-206ENST00000454852 SLC26A2P50443 739 aa12.62□□□□□ -0.39
TRAF4-206ENST00000454852 PSMC5P62195 406 aa12.62□□□□□ -0.39
TRAF4-206ENST00000454852 GRB10Q13322 594 aa12.62□□□□□ -0.39
TRAF4-206ENST00000454852 SNW1Q13573 536 aaKnown RBP12.62□□□□□ -0.39
TRAF4-206ENST00000454852 NFKBIBQ15653 356 aa12.62□□□□□ -0.39
TRAF4-206ENST00000454852 E2F4Q16254 413 aa12.62□□□□□ -0.39
TRAF4-206ENST00000454852 SPECC1Q5M775 1068 aa12.62□□□□□ -0.39
TRAF4-206ENST00000454852 CCDC73Q6ZRK6 1079 aa12.62□□□□□ -0.39
TRAF4-206ENST00000454852 PLPPR4Q7Z2D5 763 aa12.62□□□□□ -0.39
TRAF4-206ENST00000454852 C4orf19Q8IY42 314 aa12.62□□□□□ -0.39
TRAF4-206ENST00000454852 FMR1NBQ8N0W7 255 aaPredicted RBP12.62□□□□□ -0.39
TRAF4-206ENST00000454852 OR6J1Q8NGC5 347 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms