RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 IGLV3-22A0A075B6J6 115 aa28.3■■■□□ 2.12
MSH2-203ENST00000454849 EDIL3O43854 480 aa28.3■■■□□ 2.12
MSH2-203ENST00000454849 NPY5RQ15761 445 aa28.3■■■□□ 2.12
MSH2-203ENST00000454849 PRR16Q569H4 304 aa28.3■■■□□ 2.12
MSH2-203ENST00000454849 FAM109BQ6ICB4 259 aaPredicted RBP28.3■■■□□ 2.12
MSH2-203ENST00000454849 BLIDQ8IZY5 108 aa28.3■■■□□ 2.12
MSH2-203ENST00000454849 GLG1Q92896 1179 aa28.3■■■□□ 2.12
MSH2-203ENST00000454849 GTF3C6Q969F1 213 aa28.3■■■□□ 2.12
MSH2-203ENST00000454849 C17orf102A2RUQ5 167 aa28.29■■■□□ 2.12
MSH2-203ENST00000454849 JAK2O60674 1132 aa28.29■■■□□ 2.12
MSH2-203ENST00000454849 FGBP02675 491 aa28.29■■■□□ 2.12
MSH2-203ENST00000454849 IQCF3P0C7M6 154 aa28.29■■■□□ 2.12
MSH2-203ENST00000454849 BFSP2Q13515 415 aa28.29■■■□□ 2.12
MSH2-203ENST00000454849 MCTP2Q6DN12 878 aa28.29■■■□□ 2.12
MSH2-203ENST00000454849 ATP6V0A1Q93050 837 aa28.29■■■□□ 2.12
MSH2-203ENST00000454849 CXXC1Q9P0U4 656 aaPredicted RBP28.29■■■□□ 2.12
MSH2-203ENST00000454849 ZNF215Q9UL58 517 aaPredicted RBP28.29■■■□□ 2.12
MSH2-203ENST00000454849 TRIP12Q14669 1992 aaPredicted RBP28.28■■■□□ 2.12
MSH2-203ENST00000454849 GRXCR1A8MXD5 290 aa28.28■■■□□ 2.12
MSH2-203ENST00000454849 TREHO43280 583 aa28.28■■■□□ 2.12
MSH2-203ENST00000454849 FDPSP14324 419 aaKnown RBP28.28■■■□□ 2.12
MSH2-203ENST00000454849 ACTR2P61160 394 aa28.28■■■□□ 2.12
MSH2-203ENST00000454849 TBCKQ8TEA7 893 aa28.28■■■□□ 2.12
MSH2-203ENST00000454849 PCYT2Q99447 389 aa28.28■■■□□ 2.12
MSH2-203ENST00000454849 SCN5AQ14524 2016 aa28.27■■■□□ 2.12
MSH2-203ENST00000454849 CCNE2O96020 404 aa28.27■■■□□ 2.12
MSH2-203ENST00000454849 ST3GAL1Q11201 340 aa28.27■■■□□ 2.12
MSH2-203ENST00000454849 PSRC1Q6PGN9 363 aaPredicted RBP28.27■■■□□ 2.12
MSH2-203ENST00000454849 NIPA1Q7RTP0 329 aa28.27■■■□□ 2.12
MSH2-203ENST00000454849 ZNF577Q9BSK1 485 aa28.27■■■□□ 2.12
MSH2-203ENST00000454849 NFASCO94856 1347 aa28.26■■■□□ 2.11
MSH2-203ENST00000454849 STK36Q9NRP7 1315 aa28.26■■■□□ 2.11
MSH2-203ENST00000454849 IPO5O00410 1097 aaKnown RBP28.26■■■□□ 2.11
MSH2-203ENST00000454849 PITPNM1O00562 1244 aa28.26■■■□□ 2.11
MSH2-203ENST00000454849 CKBP12277 381 aa28.26■■■□□ 2.11
MSH2-203ENST00000454849 PTK7Q13308 1070 aa28.26■■■□□ 2.11
MSH2-203ENST00000454849 RPUSD2Q8IZ73 545 aaKnown RBP28.26■■■□□ 2.11
MSH2-203ENST00000454849 NSUN7Q8NE18 718 aaKnown RBP28.26■■■□□ 2.11
MSH2-203ENST00000454849 OXER1Q8TDS5 423 aa28.26■■■□□ 2.11
MSH2-203ENST00000454849 GJA10Q969M2 543 aa28.26■■■□□ 2.11
MSH2-203ENST00000454849 FAM161BQ96MY7 647 aa28.26■■■□□ 2.11
MSH2-203ENST00000454849 FTOQ9C0B1 505 aaKnown RBP eCLIP28.26■■■□□ 2.11
MSH2-203ENST00000454849 M0R2N6 131 aa28.25■■■□□ 2.11
MSH2-203ENST00000454849 DHX15O43143 795 aaKnown RBP28.25■■■□□ 2.11
MSH2-203ENST00000454849 TRIM71Q2Q1W2 868 aaKnown RBP28.25■■■□□ 2.11
MSH2-203ENST00000454849 DEFB123Q8N688 67 aa28.25■■■□□ 2.11
MSH2-203ENST00000454849 CCDC155Q8N6L0 562 aa28.25■■■□□ 2.11
MSH2-203ENST00000454849 ZBTB10Q96DT7 871 aa28.25■■■□□ 2.11
MSH2-203ENST00000454849 PHF20Q9BVI0 1012 aa28.25■■■□□ 2.11
MSH2-203ENST00000454849 LIMCH1Q9UPQ0 1083 aa28.25■■■□□ 2.11
MSH2-203ENST00000454849 ZBBXA8MT70 800 aa28.24■■■□□ 2.11
MSH2-203ENST00000454849 SELPP16109 830 aa28.24■■■□□ 2.11
MSH2-203ENST00000454849 CIITAP33076 1130 aa28.24■■■□□ 2.11
MSH2-203ENST00000454849 THPOP40225 353 aa28.24■■■□□ 2.11
MSH2-203ENST00000454849 GPNMBQ14956 572 aa28.24■■■□□ 2.11
MSH2-203ENST00000454849 ZNF618Q5T7W0 954 aa28.24■■■□□ 2.11
MSH2-203ENST00000454849 LRRC8DQ7L1W4 858 aa28.24■■■□□ 2.11
MSH2-203ENST00000454849 SERINC5Q86VE9 423 aa28.24■■■□□ 2.11
MSH2-203ENST00000454849 CCDC83Q8IWF9 413 aa28.24■■■□□ 2.11
MSH2-203ENST00000454849 DAGLBQ8NCG7 672 aa28.24■■■□□ 2.11
MSH2-203ENST00000454849 CAGE1Q8TC20 777 aa28.24■■■□□ 2.11
MSH2-203ENST00000454849 LMBR1Q8WVP7 490 aa28.24■■■□□ 2.11
MSH2-203ENST00000454849 HERVK_113Q902F9 699 aa28.24■■■□□ 2.11
MSH2-203ENST00000454849 LENG9Q96B70 501 aa28.24■■■□□ 2.11
MSH2-203ENST00000454849 SMARCAD1Q9H4L7 1026 aa28.24■■■□□ 2.11
MSH2-203ENST00000454849 IGBP1P78318 339 aa28.23■■■□□ 2.11
MSH2-203ENST00000454849 INF2Q27J81 1249 aa28.23■■■□□ 2.11
MSH2-203ENST00000454849 AFAP1L1Q8TED9 768 aa28.23■■■□□ 2.11
MSH2-203ENST00000454849 AZI2Q9H6S1 392 aa28.23■■■□□ 2.11
MSH2-203ENST00000454849 ERAP1Q9NZ08 941 aa28.23■■■□□ 2.11
MSH2-203ENST00000454849 LGR5O75473 907 aa28.22■■■□□ 2.11
MSH2-203ENST00000454849 TDP2O95551 362 aa28.22■■■□□ 2.11
MSH2-203ENST00000454849 HOXC8P31273 242 aa28.22■■■□□ 2.11
MSH2-203ENST00000454849 PPFIA1Q13136 1202 aa28.22■■■□□ 2.11
MSH2-203ENST00000454849 RASIP1Q5U651 963 aa28.22■■■□□ 2.11
MSH2-203ENST00000454849 BACH1O14867 736 aa28.21■■■□□ 2.11
MSH2-203ENST00000454849 MSH4O15457 936 aa28.21■■■□□ 2.11
MSH2-203ENST00000454849 CTSHP09668 335 aa28.21■■■□□ 2.11
MSH2-203ENST00000454849 XBP1P17861 261 aa28.21■■■□□ 2.11
MSH2-203ENST00000454849 RBM25P49756 843 aaKnown RBP28.21■■■□□ 2.11
MSH2-203ENST00000454849 USP11P51784 963 aa28.21■■■□□ 2.11
MSH2-203ENST00000454849 GALNT17Q6IS24 598 aa28.21■■■□□ 2.11
MSH2-203ENST00000454849 TRAF7Q6Q0C0 670 aa28.21■■■□□ 2.11
MSH2-203ENST00000454849 RUFY4Q6ZNE9 571 aa28.21■■■□□ 2.11
MSH2-203ENST00000454849 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.2■■■□□ 2.1
MSH2-203ENST00000454849 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.2■■■□□ 2.1
MSH2-203ENST00000454849 NBNO60934 754 aa28.2■■■□□ 2.1
MSH2-203ENST00000454849 GNAT1P11488 350 aa28.2■■■□□ 2.1
MSH2-203ENST00000454849 PBX2P40425 430 aa28.2■■■□□ 2.1
MSH2-203ENST00000454849 STAT5BP51692 787 aa28.2■■■□□ 2.1
MSH2-203ENST00000454849 SMAD3P84022 425 aaKnown RBP28.2■■■□□ 2.1
MSH2-203ENST00000454849 SETQ01105 290 aaPredicted RBP28.2■■■□□ 2.1
MSH2-203ENST00000454849 NONOQ15233 471 aaKnown RBP eCLIP28.2■■■□□ 2.1
MSH2-203ENST00000454849 GRIK4Q16099 956 aa28.2■■■□□ 2.1
MSH2-203ENST00000454849 ABHD15Q6UXT9 468 aa28.2■■■□□ 2.1
MSH2-203ENST00000454849 TRMT1LQ7Z2T5 733 aaKnown RBP28.2■■■□□ 2.1
MSH2-203ENST00000454849 TRAPPC12Q8WVT3 735 aa28.2■■■□□ 2.1
MSH2-203ENST00000454849 WASF1Q92558 559 aa28.2■■■□□ 2.1
MSH2-203ENST00000454849 TRPC6Q9Y210 931 aa28.2■■■□□ 2.1
MSH2-203ENST00000454849 EMSYQ7Z589 1322 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms