RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 ADAM9Q13443 819 aa15.12■□□□□ 0.01
CLK3-203ENST00000454830 MUM1L1Q5H9M0 696 aa15.12■□□□□ 0.01
CLK3-203ENST00000454830 ZNF569Q5MCW4 686 aa15.12■□□□□ 0.01
CLK3-203ENST00000454830 MCF2L2Q86YR7 1114 aa15.12■□□□□ 0.01
CLK3-203ENST00000454830 ATRIPQ8WXE1 791 aa15.12■□□□□ 0.01
CLK3-203ENST00000454830 MBOAT7Q96N66 472 aa15.12■□□□□ 0.01
CLK3-203ENST00000454830 SH2D3AQ9BRG2 576 aa15.12■□□□□ 0.01
CLK3-203ENST00000454830 KIAA1683Q9H0B3 1180 aa15.12■□□□□ 0.01
CLK3-203ENST00000454830 ADGRG1Q9Y653 693 aa15.12■□□□□ 0.01
CLK3-203ENST00000454830 SORBS3O60504 671 aa15.12■□□□□ 0.01
CLK3-203ENST00000454830 PRELPP51888 382 aa15.12■□□□□ 0.01
CLK3-203ENST00000454830 SPIRE1Q08AE8 756 aa15.12■□□□□ 0.01
CLK3-203ENST00000454830 VWA3BQ502W6 1294 aa15.12■□□□□ 0.01
CLK3-203ENST00000454830 DLK2Q6UY11 383 aa15.12■□□□□ 0.01
CLK3-203ENST00000454830 MIER3Q7Z3K6 550 aa15.12■□□□□ 0.01
CLK3-203ENST00000454830 CCDC155Q8N6L0 562 aa15.12■□□□□ 0.01
CLK3-203ENST00000454830 RUSC1Q9BVN2 902 aa15.12■□□□□ 0.01
CLK3-203ENST00000454830 ZSWIM4Q9H7M6 989 aa15.12■□□□□ 0.01
CLK3-203ENST00000454830 AS3MTQ9HBK9 375 aa15.12■□□□□ 0.01
CLK3-203ENST00000454830 USP14P54578 494 aa15.11■□□□□ 0.01
CLK3-203ENST00000454830 ERVK-24P63145 666 aa15.11■□□□□ 0.01
CLK3-203ENST00000454830 MAN2A1Q16706 1144 aa15.11■□□□□ 0.01
CLK3-203ENST00000454830 CRYGNQ8WXF5 182 aa15.11■□□□□ 0.01
CLK3-203ENST00000454830 TRERF1Q96PN7 1200 aa15.11■□□□□ 0.01
CLK3-203ENST00000454830 PURBQ96QR8 312 aaKnown RBP15.11■□□□□ 0.01
CLK3-203ENST00000454830 WDR24Q96S15 920 aa15.11■□□□□ 0.01
CLK3-203ENST00000454830 GUCA1BQ9UMX6 200 aa15.11■□□□□ 0.01
CLK3-203ENST00000454830 CYP3A4P08684 503 aa15.11■□□□□ 0.01
CLK3-203ENST00000454830 SLC12A3P55017 1021 aa15.11■□□□□ 0.01
CLK3-203ENST00000454830 ARSHQ5FYA8 562 aa15.11■□□□□ 0.01
CLK3-203ENST00000454830 IL31RAQ8NI17 732 aa15.11■□□□□ 0.01
CLK3-203ENST00000454830 WDR11Q9BZH6 1224 aa15.11■□□□□ 0.01
CLK3-203ENST00000454830 NLRC4Q9NPP4 1024 aa15.11■□□□□ 0.01
CLK3-203ENST00000454830 VAV3Q9UKW4 847 aa15.11■□□□□ 0.01
CLK3-203ENST00000454830 IGLV3-22A0A075B6J6 115 aa15.11■□□□□ 0.01
CLK3-203ENST00000454830 ARHGEF35A5YM69 484 aa15.11■□□□□ 0.01
CLK3-203ENST00000454830 CETN3O15182 167 aa15.11■□□□□ 0.01
CLK3-203ENST00000454830 NR2F2P24468 414 aa15.11■□□□□ 0.01
CLK3-203ENST00000454830 PTGER2P43116 358 aa15.11■□□□□ 0.01
CLK3-203ENST00000454830 RPS6P62753 249 aaKnown RBP15.11■□□□□ 0.01
CLK3-203ENST00000454830 ARHGEF16Q5VV41 709 aa15.11■□□□□ 0.01
CLK3-203ENST00000454830 OTOP1Q7RTM1 612 aa15.11■□□□□ 0.01
CLK3-203ENST00000454830 BCAS3Q9H6U6 928 aa15.11■□□□□ 0.01
CLK3-203ENST00000454830 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.11■□□□□ 0.01
CLK3-203ENST00000454830 COL4A3BPQ9Y5P4 624 aa15.11■□□□□ 0.01
CLK3-203ENST00000454830 CLIC2O15247 247 aa15.1■□□□□ 0.01
CLK3-203ENST00000454830 DCAF17Q5H9S7 520 aaPredicted RBP15.1■□□□□ 0.01
CLK3-203ENST00000454830 HYIQ5T013 277 aa15.1■□□□□ 0.01
CLK3-203ENST00000454830 RNF207Q6ZRF8 634 aa15.1■□□□□ 0.01
CLK3-203ENST00000454830 SYT2Q8N9I0 419 aaPredicted RBP15.1■□□□□ 0.01
CLK3-203ENST00000454830 ZNF280CQ8ND82 737 aa15.1■□□□□ 0.01
CLK3-203ENST00000454830 TAAR1Q96RJ0 339 aa15.1■□□□□ 0.01
CLK3-203ENST00000454830 RMDN3Q96TC7 470 aa15.1■□□□□ 0.01
CLK3-203ENST00000454830 TMOD4Q9NZQ9 345 aa15.1■□□□□ 0.01
CLK3-203ENST00000454830 COL20A1Q9P218 1284 aa15.1■□□□□ 0.01
CLK3-203ENST00000454830 EPN1Q9Y6I3 576 aaPredicted RBP15.1■□□□□ 0.01
CLK3-203ENST00000454830 FZD9O00144 591 aa15.1■□□□□ 0.01
CLK3-203ENST00000454830 CASP5P51878 434 aa15.1■□□□□ 0.01
CLK3-203ENST00000454830 ARID5AQ03989 594 aa15.1■□□□□ 0.01
CLK3-203ENST00000454830 GIT2Q14161 759 aa15.1■□□□□ 0.01
CLK3-203ENST00000454830 TTLL12Q14166 644 aaPredicted RBP15.1■□□□□ 0.01
CLK3-203ENST00000454830 SCYL3Q8IZE3 742 aa15.1■□□□□ 0.01
CLK3-203ENST00000454830 UNC45AQ9H3U1 944 aa15.1■□□□□ 0.01
CLK3-203ENST00000454830 STK24Q9Y6E0 443 aa15.1■□□□□ 0.01
CLK3-203ENST00000454830 A0A1W2PQC6 194 aa15.1■□□□□ 0.01
CLK3-203ENST00000454830 MYBP10242 640 aa15.1■□□□□ 0.01
CLK3-203ENST00000454830 TDRD12Q587J7 1177 aaKnown RBP15.1■□□□□ 0.01
CLK3-203ENST00000454830 RRAGAQ7L523 313 aa15.1■□□□□ 0.01
CLK3-203ENST00000454830 APOBEC3FQ8IUX4 373 aaKnown RBP15.1■□□□□ 0.01
CLK3-203ENST00000454830 PDCL2Q8N4E4 241 aa15.1■□□□□ 0.01
CLK3-203ENST00000454830 NEK11Q8NG66 645 aa15.1■□□□□ 0.01
CLK3-203ENST00000454830 ZNF507Q8TCN5 953 aa15.1■□□□□ 0.01
CLK3-203ENST00000454830 SCFD1Q8WVM8 642 aa15.1■□□□□ 0.01
CLK3-203ENST00000454830 NUP58Q9BVL2 599 aa15.1■□□□□ 0.01
CLK3-203ENST00000454830 KCNH7Q9NS40 1196 aa15.1■□□□□ 0.01
CLK3-203ENST00000454830 RNF146Q9NTX7 359 aa15.1■□□□□ 0.01
CLK3-203ENST00000454830 PGAP2Q9UHJ9 254 aa15.1■□□□□ 0.01
CLK3-203ENST00000454830 PPP1R9AQ9ULJ8 1098 aa15.1■□□□□ 0.01
CLK3-203ENST00000454830 EYA4O95677 639 aa15.09■□□□□ 0.01
CLK3-203ENST00000454830 SNRNP48Q6IEG0 339 aaKnown RBP15.09■□□□□ 0.01
CLK3-203ENST00000454830 MXRA8Q9BRK3 442 aa15.09■□□□□ 0.01
CLK3-203ENST00000454830 LXNQ9BS40 222 aa15.09■□□□□ 0.01
CLK3-203ENST00000454830 CARD6Q9BX69 1037 aa15.09■□□□□ 0.01
CLK3-203ENST00000454830 DDNO94850 711 aaPredicted RBP15.09■□□□□ 0.01
CLK3-203ENST00000454830 BACE1P56817 501 aa15.09■□□□□ 0.01
CLK3-203ENST00000454830 ELF2Q15723 593 aa15.09■□□□□ 0.01
CLK3-203ENST00000454830 KRT26Q7Z3Y9 468 aa15.09■□□□□ 0.01
CLK3-203ENST00000454830 PCDHB13Q9Y5F0 798 aa15.09■□□□□ 0.01
CLK3-203ENST00000454830 SLITRK3O94933 977 aa15.09■□□□□ 0.01
CLK3-203ENST00000454830 TRIM65Q6PJ69 517 aa15.09■□□□□ 0.01
CLK3-203ENST00000454830 WNK4Q96J92 1243 aa15.09■□□□□ 0.01
CLK3-203ENST00000454830 KCND1Q9NSA2 647 aa15.09■□□□□ 0.01
CLK3-203ENST00000454830 TUBB4AP04350 444 aa15.08■□□□□ 0.01
CLK3-203ENST00000454830 ITGB5P18084 799 aa15.08■□□□□ 0.01
CLK3-203ENST00000454830 GTF2F1P35269 517 aaKnown RBP eCLIP15.08■□□□□ 0.01
CLK3-203ENST00000454830 SETQ01105 290 aaPredicted RBP15.08■□□□□ 0.01
CLK3-203ENST00000454830 MTMR1Q13613 665 aa15.08■□□□□ 0.01
CLK3-203ENST00000454830 BAATQ14032 418 aaPredicted RBP15.08■□□□□ 0.01
CLK3-203ENST00000454830 MIIPQ5JXC2 388 aa15.08■□□□□ 0.01
CLK3-203ENST00000454830 KSR1Q8IVT5 923 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms