RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 BEX3Q00994 111 aa17.77■□□□□ 0.44
VCX3B-204ENST00000453306 ITGB3BPQ13352 177 aaPredicted RBP17.77■□□□□ 0.44
VCX3B-204ENST00000453306 ZNF174Q15697 407 aa17.77■□□□□ 0.44
VCX3B-204ENST00000453306 PRR16Q569H4 304 aa17.77■□□□□ 0.44
VCX3B-204ENST00000453306 TMEM240Q5SV17 173 aa17.77■□□□□ 0.44
VCX3B-204ENST00000453306 C4orf32Q8N8J7 132 aa17.77■□□□□ 0.44
VCX3B-204ENST00000453306 PPP1R12CQ9BZL4 782 aa17.77■□□□□ 0.44
VCX3B-204ENST00000453306 FTOQ9C0B1 505 aaKnown RBP eCLIP17.77■□□□□ 0.44
VCX3B-204ENST00000453306 TMEM60Q9H2L4 133 aa17.77■□□□□ 0.44
VCX3B-204ENST00000453306 ZNF576Q9H609 170 aa17.77■□□□□ 0.44
VCX3B-204ENST00000453306 EHMT1Q9H9B1 1298 aa17.77■□□□□ 0.44
VCX3B-204ENST00000453306 KCNH7Q9NS40 1196 aa17.77■□□□□ 0.44
VCX3B-204ENST00000453306 MRVI1Q9Y6F6 885 aa17.77■□□□□ 0.44
VCX3B-204ENST00000453306 CTAGE5O15320 804 aa17.76■□□□□ 0.43
VCX3B-204ENST00000453306 DHX15O43143 795 aaKnown RBP17.76■□□□□ 0.43
VCX3B-204ENST00000453306 DYNC1LI2O43237 492 aaPredicted RBP17.76■□□□□ 0.43
VCX3B-204ENST00000453306 SORBS3O60504 671 aa17.76■□□□□ 0.43
VCX3B-204ENST00000453306 CD4P01730 458 aa17.76■□□□□ 0.43
VCX3B-204ENST00000453306 KCNA2P16389 499 aa17.76■□□□□ 0.43
VCX3B-204ENST00000453306 ITGA7Q13683 1181 aa17.76■□□□□ 0.43
VCX3B-204ENST00000453306 MYSM1Q5VVJ2 828 aa17.76■□□□□ 0.43
VCX3B-204ENST00000453306 PPP4R3AQ6IN85 833 aa17.76■□□□□ 0.43
VCX3B-204ENST00000453306 CXCL17Q6UXB2 119 aa17.76■□□□□ 0.43
VCX3B-204ENST00000453306 NIPA1Q7RTP0 329 aa17.76■□□□□ 0.43
VCX3B-204ENST00000453306 PLA2G4DQ86XP0 818 aa17.76■□□□□ 0.43
VCX3B-204ENST00000453306 SLC43A3Q8NBI5 491 aa17.76■□□□□ 0.43
VCX3B-204ENST00000453306 SYMPKQ92797 1274 aaKnown RBP17.76■□□□□ 0.43
VCX3B-204ENST00000453306 HAS1Q92839 578 aa17.76■□□□□ 0.43
VCX3B-204ENST00000453306 AGO4Q9HCK5 861 aaKnown RBP17.76■□□□□ 0.43
VCX3B-204ENST00000453306 LRRC37A2A6NM11 1700 aa17.75■□□□□ 0.43
VCX3B-204ENST00000453306 B4DLN1 442 aa17.75■□□□□ 0.43
VCX3B-204ENST00000453306 MSH4O15457 936 aa17.75■□□□□ 0.43
VCX3B-204ENST00000453306 CCNT1O60563 726 aaKnown RBP17.75■□□□□ 0.43
VCX3B-204ENST00000453306 STAM2O75886 525 aa17.75■□□□□ 0.43
VCX3B-204ENST00000453306 F13A1P00488 732 aa17.75■□□□□ 0.43
VCX3B-204ENST00000453306 ZNF76P36508 570 aa17.75■□□□□ 0.43
VCX3B-204ENST00000453306 GRIN2CQ14957 1233 aa17.75■□□□□ 0.43
VCX3B-204ENST00000453306 Q4G0T1 1027 aa17.75■□□□□ 0.43
VCX3B-204ENST00000453306 MOXD1Q6UVY6 613 aa17.75■□□□□ 0.43
VCX3B-204ENST00000453306 ZNF365Q70YC5 407 aa17.75■□□□□ 0.43
VCX3B-204ENST00000453306 ETNPPLQ8TBG4 499 aa17.75■□□□□ 0.43
VCX3B-204ENST00000453306 GPRASP2Q96D09 838 aa17.75■□□□□ 0.43
VCX3B-204ENST00000453306 MPHOSPH6Q99547 160 aaKnown RBP17.75■□□□□ 0.43
VCX3B-204ENST00000453306 HIPK3Q9H422 1215 aa17.75■□□□□ 0.43
VCX3B-204ENST00000453306 IL23AQ9NPF7 189 aa17.75■□□□□ 0.43
VCX3B-204ENST00000453306 PKD2L1Q9P0L9 805 aa17.75■□□□□ 0.43
VCX3B-204ENST00000453306 FIBPO43427 364 aa17.74■□□□□ 0.43
VCX3B-204ENST00000453306 TXNP10599 105 aaKnown RBP17.74■□□□□ 0.43
VCX3B-204ENST00000453306 UBA1P22314 1058 aaKnown RBP17.74■□□□□ 0.43
VCX3B-204ENST00000453306 MCM7P33993 719 aa17.74■□□□□ 0.43
VCX3B-204ENST00000453306 ARHGAP1Q07960 439 aa17.74■□□□□ 0.43
VCX3B-204ENST00000453306 MTMR1Q13613 665 aa17.74■□□□□ 0.43
VCX3B-204ENST00000453306 GNL2Q13823 731 aaKnown RBP17.74■□□□□ 0.43
VCX3B-204ENST00000453306 RAB30Q15771 203 aa17.74■□□□□ 0.43
VCX3B-204ENST00000453306 DUSP28Q4G0W2 176 aa17.74■□□□□ 0.43
VCX3B-204ENST00000453306 TTC38Q5R3I4 469 aa17.74■□□□□ 0.43
VCX3B-204ENST00000453306 RASIP1Q5U651 963 aa17.74■□□□□ 0.43
VCX3B-204ENST00000453306 C16orf59Q7L2K0 433 aa17.74■□□□□ 0.43
VCX3B-204ENST00000453306 BRAPQ7Z569 592 aa17.74■□□□□ 0.43
VCX3B-204ENST00000453306 POTEDQ86YR6 584 aa17.74■□□□□ 0.43
VCX3B-204ENST00000453306 SCFD2Q8WU76 684 aa17.74■□□□□ 0.43
VCX3B-204ENST00000453306 MTMR9Q96QG7 549 aa17.74■□□□□ 0.43
VCX3B-204ENST00000453306 GAS2L1Q99501 681 aaPredicted RBP17.74■□□□□ 0.43
VCX3B-204ENST00000453306 KCNMB3Q9NPA1 279 aa17.74■□□□□ 0.43
VCX3B-204ENST00000453306 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.74■□□□□ 0.43
VCX3B-204ENST00000453306 DDX25Q9UHL0 483 aaKnown RBP17.74■□□□□ 0.43
VCX3B-204ENST00000453306 MSRAQ9UJ68 235 aa17.74■□□□□ 0.43
VCX3B-204ENST00000453306 MCM3APO60318 1980 aa17.73■□□□□ 0.43
VCX3B-204ENST00000453306 FGBP02675 491 aa17.73■□□□□ 0.43
VCX3B-204ENST00000453306 ACRP10323 421 aa17.73■□□□□ 0.43
VCX3B-204ENST00000453306 CYP2C18P33260 490 aa17.73■□□□□ 0.43
VCX3B-204ENST00000453306 TRAPPC10P48553 1259 aa17.73■□□□□ 0.43
VCX3B-204ENST00000453306 IL17AQ16552 155 aa17.73■□□□□ 0.43
VCX3B-204ENST00000453306 FOXD4L6Q3SYB3 417 aaPredicted RBP17.73■□□□□ 0.43
VCX3B-204ENST00000453306 FOXD4L3Q6VB84 417 aaPredicted RBP17.73■□□□□ 0.43
VCX3B-204ENST00000453306 NLRX1Q86UT6 975 aa17.73■□□□□ 0.43
VCX3B-204ENST00000453306 RPUSD2Q8IZ73 545 aaKnown RBP17.73■□□□□ 0.43
VCX3B-204ENST00000453306 HERVK_113Q902F9 699 aa17.73■□□□□ 0.43
VCX3B-204ENST00000453306 SLC5A5Q92911 643 aa17.73■□□□□ 0.43
VCX3B-204ENST00000453306 PBX4Q9BYU1 374 aa17.73■□□□□ 0.43
VCX3B-204ENST00000453306 POLR3EQ9NVU0 708 aa17.73■□□□□ 0.43
VCX3B-204ENST00000453306 CLIC4Q9Y696 253 aa17.73■□□□□ 0.43
VCX3B-204ENST00000453306 CCNE2O96020 404 aa17.72■□□□□ 0.43
VCX3B-204ENST00000453306 TGFB3P10600 412 aa17.72■□□□□ 0.43
VCX3B-204ENST00000453306 CPT1AP50416 773 aa17.72■□□□□ 0.43
VCX3B-204ENST00000453306 BRDTQ58F21 947 aaPredicted RBP17.72■□□□□ 0.43
VCX3B-204ENST00000453306 CELF3Q5SZQ8 465 aaKnown RBP17.72■□□□□ 0.43
VCX3B-204ENST00000453306 USP28Q96RU2 1077 aa17.72■□□□□ 0.43
VCX3B-204ENST00000453306 ZSCAN16Q9H4T2 348 aaPredicted RBP17.72■□□□□ 0.43
VCX3B-204ENST00000453306 TFIP11Q9UBB9 837 aaKnown RBP17.72■□□□□ 0.43
VCX3B-204ENST00000453306 DAXXQ9UER7 740 aaPredicted RBP17.72■□□□□ 0.43
VCX3B-204ENST00000453306 EYSQ5T1H1 3165 aa17.72■□□□□ 0.43
VCX3B-204ENST00000453306 MAFGO15525 162 aa17.71■□□□□ 0.43
VCX3B-204ENST00000453306 PSMD10O75832 226 aa17.71■□□□□ 0.43
VCX3B-204ENST00000453306 GGPS1O95749 300 aa17.71■□□□□ 0.43
VCX3B-204ENST00000453306 SUPT20HL2P0C7V6 817 aa17.71■□□□□ 0.43
VCX3B-204ENST00000453306 GCFC2P16383 781 aaKnown RBP17.71■□□□□ 0.43
VCX3B-204ENST00000453306 TTLL4Q14679 1199 aa17.71■□□□□ 0.43
VCX3B-204ENST00000453306 PTPAQ15257 358 aa17.71■□□□□ 0.43
VCX3B-204ENST00000453306 GNPTABQ3T906 1256 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms