RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 CLDND1Q9NY35 253 aa16.52■□□□□ 0.24
LYSMD3-202ENST00000453259 ERICH2A1L162 156 aa16.51■□□□□ 0.23
LYSMD3-202ENST00000453259 PKN1Q16512 942 aa16.51■□□□□ 0.23
LYSMD3-202ENST00000453259 NAALADL2Q58DX5 795 aa16.51■□□□□ 0.23
LYSMD3-202ENST00000453259 HERC4Q5GLZ8 1057 aaPredicted RBP16.51■□□□□ 0.23
LYSMD3-202ENST00000453259 ALYREFQ86V81 257 aaKnown RBP16.51■□□□□ 0.23
LYSMD3-202ENST00000453259 FCHSD1Q86WN1 690 aa16.51■□□□□ 0.23
LYSMD3-202ENST00000453259 LMBR1Q8WVP7 490 aa16.51■□□□□ 0.23
LYSMD3-202ENST00000453259 P2RX5Q93086 422 aa16.51■□□□□ 0.23
LYSMD3-202ENST00000453259 CDHR1Q96JP9 859 aa16.51■□□□□ 0.23
LYSMD3-202ENST00000453259 RWDD1Q9H446 243 aaPredicted RBP16.51■□□□□ 0.23
LYSMD3-202ENST00000453259 EHMT1Q9H9B1 1298 aa16.51■□□□□ 0.23
LYSMD3-202ENST00000453259 RC3H2Q9HBD1 1191 aaKnown RBP16.51■□□□□ 0.23
LYSMD3-202ENST00000453259 SETD4Q9NVD3 440 aa16.51■□□□□ 0.23
LYSMD3-202ENST00000453259 MMP1P03956 469 aa16.5■□□□□ 0.23
LYSMD3-202ENST00000453259 LTBRP36941 435 aa16.5■□□□□ 0.23
LYSMD3-202ENST00000453259 MRE11P49959 708 aa16.5■□□□□ 0.23
LYSMD3-202ENST00000453259 MRPS9P82933 396 aaKnown RBP16.5■□□□□ 0.23
LYSMD3-202ENST00000453259 NHLH1Q02575 133 aa16.5■□□□□ 0.23
LYSMD3-202ENST00000453259 SMAD4Q13485 552 aaKnown RBP16.5■□□□□ 0.23
LYSMD3-202ENST00000453259 SART3Q15020 963 aaKnown RBP16.5■□□□□ 0.23
LYSMD3-202ENST00000453259 PCNX4Q63HM2 1172 aa16.5■□□□□ 0.23
LYSMD3-202ENST00000453259 CYFIP1Q7L576 1253 aa16.5■□□□□ 0.23
LYSMD3-202ENST00000453259 CHD1LQ86WJ1 897 aa16.5■□□□□ 0.23
LYSMD3-202ENST00000453259 HOMER1Q86YM7 354 aa16.5■□□□□ 0.23
LYSMD3-202ENST00000453259 PLEKHM2Q8IWE5 1019 aa16.5■□□□□ 0.23
LYSMD3-202ENST00000453259 PIGSQ96S52 555 aa16.5■□□□□ 0.23
LYSMD3-202ENST00000453259 PRRX2Q99811 253 aa16.5■□□□□ 0.23
LYSMD3-202ENST00000453259 SQORQ9Y6N5 450 aa16.5■□□□□ 0.23
LYSMD3-202ENST00000453259 FSD2A1L4K1 749 aa16.49■□□□□ 0.23
LYSMD3-202ENST00000453259 PIK3CDO00329 1044 aa16.49■□□□□ 0.23
LYSMD3-202ENST00000453259 LINC00271P0C7V0 271 aa16.49■□□□□ 0.23
LYSMD3-202ENST00000453259 ARHGAP4P98171 946 aa16.49■□□□□ 0.23
LYSMD3-202ENST00000453259 EP400NLQ6ZTU2 488 aa16.49■□□□□ 0.23
LYSMD3-202ENST00000453259 NLRX1Q86UT6 975 aa16.49■□□□□ 0.23
LYSMD3-202ENST00000453259 GPKOWQ92917 476 aaPredicted RBP eCLIP16.49■□□□□ 0.23
LYSMD3-202ENST00000453259 MAP3K14Q99558 947 aa16.49■□□□□ 0.23
LYSMD3-202ENST00000453259 SORBS3O60504 671 aa16.48■□□□□ 0.23
LYSMD3-202ENST00000453259 SMARCA1P28370 1054 aa16.48■□□□□ 0.23
LYSMD3-202ENST00000453259 IRS1P35568 1242 aa16.48■□□□□ 0.23
LYSMD3-202ENST00000453259 NUCB1Q02818 461 aa16.48■□□□□ 0.23
LYSMD3-202ENST00000453259 HYAL1Q12794 435 aa16.48■□□□□ 0.23
LYSMD3-202ENST00000453259 TROAPQ12815 778 aa16.48■□□□□ 0.23
LYSMD3-202ENST00000453259 BMP8AQ7Z5Y6 402 aa16.48■□□□□ 0.23
LYSMD3-202ENST00000453259 TNPO1Q92973 898 aaKnown RBP16.48■□□□□ 0.23
LYSMD3-202ENST00000453259 CUL5Q93034 780 aa16.48■□□□□ 0.23
LYSMD3-202ENST00000453259 ZNF689Q96CS4 500 aaPredicted RBP16.48■□□□□ 0.23
LYSMD3-202ENST00000453259 GPRASP2Q96D09 838 aa16.48■□□□□ 0.23
LYSMD3-202ENST00000453259 FTHL17Q9BXU8 183 aa16.48■□□□□ 0.23
LYSMD3-202ENST00000453259 ERAP1Q9NZ08 941 aa16.48■□□□□ 0.23
LYSMD3-202ENST00000453259 U3KPZ7 1027 aaPredicted RBP16.48■□□□□ 0.23
LYSMD3-202ENST00000453259 MBLAC1A4D2B0 266 aaPredicted RBP16.47■□□□□ 0.23
LYSMD3-202ENST00000453259 MBTPS2O43462 519 aa16.47■□□□□ 0.23
LYSMD3-202ENST00000453259 CHRNA1P02708 482 aa16.47■□□□□ 0.23
LYSMD3-202ENST00000453259 SEMA3FQ13275 785 aa16.47■□□□□ 0.23
LYSMD3-202ENST00000453259 BTG3Q14201 252 aaPredicted RBP16.47■□□□□ 0.23
LYSMD3-202ENST00000453259 TSHZ1Q6ZSZ6 1077 aa16.47■□□□□ 0.23
LYSMD3-202ENST00000453259 CMTR2Q8IYT2 770 aaKnown RBP16.47■□□□□ 0.23
LYSMD3-202ENST00000453259 FBXL18Q96ME1 805 aa16.47■□□□□ 0.23
LYSMD3-202ENST00000453259 CD207Q9UJ71 328 aa16.47■□□□□ 0.23
LYSMD3-202ENST00000453259 TUBE1Q9UJT0 475 aa16.47■□□□□ 0.23
LYSMD3-202ENST00000453259 ZNF318Q5VUA4 2279 aa16.46■□□□□ 0.23
LYSMD3-202ENST00000453259 IFIT3O14879 490 aaKnown RBP16.46■□□□□ 0.23
LYSMD3-202ENST00000453259 GRM6O15303 877 aa16.46■□□□□ 0.23
LYSMD3-202ENST00000453259 MAFGO15525 162 aa16.46■□□□□ 0.23
LYSMD3-202ENST00000453259 CYTH3O43739 400 aa16.46■□□□□ 0.23
LYSMD3-202ENST00000453259 DGKIO75912 1065 aa16.46■□□□□ 0.23
LYSMD3-202ENST00000453259 EYA4O95677 639 aa16.46■□□□□ 0.23
LYSMD3-202ENST00000453259 GHRP10912 638 aa16.46■□□□□ 0.23
LYSMD3-202ENST00000453259 MGAT3Q09327 533 aa16.46■□□□□ 0.23
LYSMD3-202ENST00000453259 PPFIA1Q13136 1202 aa16.46■□□□□ 0.23
LYSMD3-202ENST00000453259 LPIN1Q14693 890 aa16.46■□□□□ 0.23
LYSMD3-202ENST00000453259 CATIPQ7Z7H3 387 aa16.46■□□□□ 0.23
LYSMD3-202ENST00000453259 RALYLQ86SE5 291 aaKnown RBP16.46■□□□□ 0.23
LYSMD3-202ENST00000453259 TRIM50Q86XT4 487 aa16.46■□□□□ 0.23
LYSMD3-202ENST00000453259 TEX2Q8IWB9 1127 aa16.46■□□□□ 0.23
LYSMD3-202ENST00000453259 SMARCC2Q8TAQ2 1214 aa16.46■□□□□ 0.23
LYSMD3-202ENST00000453259 SPZ1Q9BXG8 430 aa16.46■□□□□ 0.23
LYSMD3-202ENST00000453259 RRN3P2A6NIE6 340 aa16.45■□□□□ 0.22
LYSMD3-202ENST00000453259 ENPP3O14638 875 aa16.45■□□□□ 0.22
LYSMD3-202ENST00000453259 KIF5BP33176 963 aa16.45■□□□□ 0.22
LYSMD3-202ENST00000453259 TCF7P36402 384 aaPredicted RBP16.45■□□□□ 0.22
LYSMD3-202ENST00000453259 ADAM15Q13444 863 aa16.45■□□□□ 0.22
LYSMD3-202ENST00000453259 WTAPQ15007 396 aa16.45■□□□□ 0.22
LYSMD3-202ENST00000453259 SLC35G1Q2M3R5 365 aa16.45■□□□□ 0.22
LYSMD3-202ENST00000453259 FBXO47Q5MNV8 452 aa16.45■□□□□ 0.22
LYSMD3-202ENST00000453259 HFE2Q6ZVN8 426 aa16.45■□□□□ 0.22
LYSMD3-202ENST00000453259 CYB5R4Q7L1T6 521 aa16.45■□□□□ 0.22
LYSMD3-202ENST00000453259 SEPT1Q8WYJ6 367 aa16.45■□□□□ 0.22
LYSMD3-202ENST00000453259 EDAQ92838 391 aa16.45■□□□□ 0.22
LYSMD3-202ENST00000453259 LZTS2Q9BRK4 669 aa16.45■□□□□ 0.22
LYSMD3-202ENST00000453259 MTA3Q9BTC8 594 aa16.45■□□□□ 0.22
LYSMD3-202ENST00000453259 OSBPL7Q9BZF2 842 aa16.45■□□□□ 0.22
LYSMD3-202ENST00000453259 SMARCAD1Q9H4L7 1026 aa16.45■□□□□ 0.22
LYSMD3-202ENST00000453259 BCAS3Q9H6U6 928 aa16.45■□□□□ 0.22
LYSMD3-202ENST00000453259 TTC3P53804 2025 aa16.45■□□□□ 0.22
LYSMD3-202ENST00000453259 STXBP3O00186 592 aa16.44■□□□□ 0.22
LYSMD3-202ENST00000453259 TBX10O75333 385 aa16.44■□□□□ 0.22
LYSMD3-202ENST00000453259 STAG3L1P0CL83 205 aa16.44■□□□□ 0.22
LYSMD3-202ENST00000453259 GRIK4Q16099 956 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms