RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 PIP4K2CQ8TBX8 421 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 TMEM87BQ96K49 555 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 ERGIC2Q96RQ1 377 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 NUDCD1Q96RS6 583 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 UBAC1Q9BSL1 405 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 SPATA16Q9BXB7 569 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 TTYH3Q9C0H2 523 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 LRMDAQ9H2I8 198 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 COPRSQ9NQ92 184 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 AIPL1Q9NZN9 384 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 PA2G4Q9UQ80 394 aaKnown RBP9.12□□□□□ -0.95
SMCO1-202ENST00000452776 TMED5Q9Y3A6 229 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 CPDO75976 1380 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 BCL9LQ86UU0 1499 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 NEO1Q92859 1461 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 A0A1B0GVG6 124 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 KDM4FA0A1W2PPD8 638 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 BICDL2A1A5D9 508 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 GRM8O00222 908 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 WDR46O15213 610 aaKnown RBP9.12□□□□□ -0.95
SMCO1-202ENST00000452776 RGS16O15492 202 aaPredicted RBP9.12□□□□□ -0.95
SMCO1-202ENST00000452776 RNF113AO15541 343 aaKnown RBP9.12□□□□□ -0.95
SMCO1-202ENST00000452776 ZNF189O75820 626 aaPredicted RBP9.12□□□□□ -0.95
SMCO1-202ENST00000452776 PPARAQ07869 468 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 CBX3Q13185 183 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 TNNI3KQ59H18 835 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 C10orf76Q5T2E6 689 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 KLHDC7AQ5VTJ3 777 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 MB21D2Q8IYB1 491 aaPredicted RBP9.12□□□□□ -0.95
SMCO1-202ENST00000452776 TRIM22Q8IYM9 498 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.12□□□□□ -0.95
SMCO1-202ENST00000452776 TBC1D16Q8TBP0 767 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 ACTRT1Q8TDG2 376 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 WDR60Q8WVS4 1066 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 ZNF333Q96JL9 665 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 ROPN1BQ9BZX4 212 aaPredicted RBP9.12□□□□□ -0.95
SMCO1-202ENST00000452776 ROPN1Q9HAT0 212 aaPredicted RBP9.12□□□□□ -0.95
SMCO1-202ENST00000452776 FBXL5Q9UKA1 691 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 ANGEL1Q9UNK9 670 aaKnown RBP9.12□□□□□ -0.95
SMCO1-202ENST00000452776 UTP11Q9Y3A2 253 aaKnown RBP9.12□□□□□ -0.95
SMCO1-202ENST00000452776 CCDC61Q9Y6R9 512 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 FPGT-TNNI3KV9GXZ4 949 aa9.12□□□□□ -0.95
SMCO1-202ENST00000452776 TMEM94Q12767 1356 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 BCL9O00512 1426 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 SMIM31A0A1B0GVY4 71 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 F8VZ95 297 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 PSMA7O14818 248 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 RAD51CO43502 376 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 STRNO43815 780 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 RAD21O60216 631 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 MBD4O95243 580 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 MMP1P03956 469 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 HARSP12081 509 aaKnown RBP9.11□□□□□ -0.95
SMCO1-202ENST00000452776 XBP1P17861 261 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 EIF4BP23588 611 aaKnown RBP9.11□□□□□ -0.95
SMCO1-202ENST00000452776 SMARCA1P28370 1054 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 PTDSS1P48651 473 aaKnown RBP9.11□□□□□ -0.95
SMCO1-202ENST00000452776 CLCN2P51788 898 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 INHBCP55103 352 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 MCL1Q07820 350 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 ADRM1Q16186 407 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 CCDC6Q16204 474 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 UAP1Q16222 522 aaPredicted RBP9.11□□□□□ -0.95
SMCO1-202ENST00000452776 SCFD2Q8WU76 684 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.11□□□□□ -0.95
SMCO1-202ENST00000452776 SEC14L1Q92503 715 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 PRCCQ92733 491 aaPredicted RBP9.11□□□□□ -0.95
SMCO1-202ENST00000452776 GATA6Q92908 595 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 TEKT1Q969V4 418 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 LENG1Q96BZ8 264 aaPredicted RBP9.11□□□□□ -0.95
SMCO1-202ENST00000452776 HAUS1Q96CS2 278 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 DHTKD1Q96HY7 919 aaPredicted RBP9.11□□□□□ -0.95
SMCO1-202ENST00000452776 PCMTD1Q96MG8 357 aaPredicted RBP9.11□□□□□ -0.95
SMCO1-202ENST00000452776 HINFPQ9BQA5 517 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 PHACTR1Q9C0D0 580 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 BRD8Q9H0E9 1235 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 CSRNP2Q9H175 543 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 NRDE2Q9H7Z3 1164 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 GPR108Q9NPR9 543 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 ABCF3Q9NUQ8 709 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 TUBGCP4Q9UGJ1 667 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 USP20Q9Y2K6 914 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 CAPN6Q9Y6Q1 641 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 DUSP10Q9Y6W6 482 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 PNPLA7Q6ZV29 1317 aa9.11□□□□□ -0.95
SMCO1-202ENST00000452776 TRIM75PA6NK02 468 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 BTNL10A8MVZ5 291 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 TJP3O95049 919 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 FGFR1OPO95684 399 aaKnown RBP9.1□□□□□ -0.95
SMCO1-202ENST00000452776 KCNA3P22001 575 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 AFMP43652 599 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 ACADVLP49748 655 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 KIF11P52732 1056 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 IDI1Q13907 227 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 SPIDRQ14159 915 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 CNPY1Q3B7I2 92 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 MEI1Q5TIA1 1274 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 DDX46Q7L014 1031 aaKnown RBP9.1□□□□□ -0.95
SMCO1-202ENST00000452776 TMC3Q7Z5M5 1100 aa9.1□□□□□ -0.95
SMCO1-202ENST00000452776 LONP2Q86WA8 852 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms