RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 PLA2G4BP0C869 781 aa12.27□□□□□ -0.45
DDR1-239ENST00000452441 TM4SF1P30408 202 aa12.27□□□□□ -0.45
DDR1-239ENST00000452441 ZBED6P86452 979 aa12.27□□□□□ -0.45
DDR1-239ENST00000452441 TUBB2AQ13885 445 aa12.27□□□□□ -0.45
DDR1-239ENST00000452441 GPATCH4Q5T3I0 446 aaKnown RBP12.27□□□□□ -0.45
DDR1-239ENST00000452441 ARL6IP4Q66PJ3 421 aaKnown RBP12.27□□□□□ -0.45
DDR1-239ENST00000452441 GJB7Q6PEY0 223 aa12.27□□□□□ -0.45
DDR1-239ENST00000452441 TMED8Q6PL24 325 aaPredicted RBP12.27□□□□□ -0.45
DDR1-239ENST00000452441 C16orf86Q6ZW13 317 aa12.27□□□□□ -0.45
DDR1-239ENST00000452441 HNRNPLLQ8WVV9 542 aaKnown RBP12.27□□□□□ -0.45
DDR1-239ENST00000452441 MTA3Q9BTC8 594 aa12.27□□□□□ -0.45
DDR1-239ENST00000452441 TUBB2BQ9BVA1 445 aa12.27□□□□□ -0.45
DDR1-239ENST00000452441 LRRC27Q9C0I9 530 aa12.27□□□□□ -0.45
DDR1-239ENST00000452441 RASSF4Q9H2L5 321 aa12.27□□□□□ -0.45
DDR1-239ENST00000452441 EMILIN3Q9NT22 766 aa12.27□□□□□ -0.45
DDR1-239ENST00000452441 RAB21Q9UL25 225 aa12.27□□□□□ -0.45
DDR1-239ENST00000452441 BMP3P12645 472 aa12.26□□□□□ -0.45
DDR1-239ENST00000452441 FUT2Q10981 343 aa12.26□□□□□ -0.45
DDR1-239ENST00000452441 FOXR1Q6PIV2 292 aa12.26□□□□□ -0.45
DDR1-239ENST00000452441 DPH6Q7L8W6 267 aa12.26□□□□□ -0.45
DDR1-239ENST00000452441 VPS36Q86VN1 386 aa12.26□□□□□ -0.45
DDR1-239ENST00000452441 TAB3Q8N5C8 712 aaPredicted RBP12.26□□□□□ -0.45
DDR1-239ENST00000452441 TCHPQ9BT92 498 aa12.26□□□□□ -0.45
DDR1-239ENST00000452441 CLEC11AQ9Y240 323 aa12.26□□□□□ -0.45
DDR1-239ENST00000452441 ITIH6Q6UXX5 1313 aa12.26□□□□□ -0.45
DDR1-239ENST00000452441 TULP2O00295 520 aa12.26□□□□□ -0.45
DDR1-239ENST00000452441 FLOT1O75955 427 aa12.26□□□□□ -0.45
DDR1-239ENST00000452441 RCAN1P53805 252 aa12.26□□□□□ -0.45
DDR1-239ENST00000452441 MKRN3Q13064 507 aaKnown RBP12.26□□□□□ -0.45
DDR1-239ENST00000452441 MUM1L1Q5H9M0 696 aa12.26□□□□□ -0.45
DDR1-239ENST00000452441 FAM83BQ5T0W9 1011 aa12.26□□□□□ -0.45
DDR1-239ENST00000452441 CC2D2BQ6DHV5 1058 aa12.26□□□□□ -0.45
DDR1-239ENST00000452441 GALNT17Q6IS24 598 aa12.26□□□□□ -0.45
DDR1-239ENST00000452441 DAAM2Q86T65 1068 aa12.26□□□□□ -0.45
DDR1-239ENST00000452441 BCAS4Q8TDM0 211 aa12.26□□□□□ -0.45
DDR1-239ENST00000452441 SCLT1Q96NL6 688 aa12.26□□□□□ -0.45
DDR1-239ENST00000452441 ANO3Q9BYT9 981 aa12.26□□□□□ -0.45
DDR1-239ENST00000452441 NDUFAB1O14561 156 aa12.26□□□□□ -0.45
DDR1-239ENST00000452441 GAS7O60861 476 aa12.26□□□□□ -0.45
DDR1-239ENST00000452441 PALMO75781 387 aa12.26□□□□□ -0.45
DDR1-239ENST00000452441 GNGT1P63211 74 aa12.26□□□□□ -0.45
DDR1-239ENST00000452441 E2F4Q16254 413 aa12.26□□□□□ -0.45
DDR1-239ENST00000452441 CYP2W1Q8TAV3 490 aa12.26□□□□□ -0.45
DDR1-239ENST00000452441 DHTKD1Q96HY7 919 aaPredicted RBP12.26□□□□□ -0.45
DDR1-239ENST00000452441 ARMCX3Q9UH62 379 aaPredicted RBP12.26□□□□□ -0.45
DDR1-239ENST00000452441 RRP15Q9Y3B9 282 aaKnown RBP12.26□□□□□ -0.45
DDR1-239ENST00000452441 MYH14Q7Z406 1995 aaKnown RBP12.25□□□□□ -0.45
DDR1-239ENST00000452441 DDTLA6NHG4 134 aaPredicted RBP12.25□□□□□ -0.45
DDR1-239ENST00000452441 ZBTB5O15062 677 aa12.25□□□□□ -0.45
DDR1-239ENST00000452441 EXOC3O60645 756 aa12.25□□□□□ -0.45
DDR1-239ENST00000452441 COPB2P35606 906 aa12.25□□□□□ -0.45
DDR1-239ENST00000452441 NAALADL2Q58DX5 795 aa12.25□□□□□ -0.45
DDR1-239ENST00000452441 NUP58Q9BVL2 599 aa12.25□□□□□ -0.45
DDR1-239ENST00000452441 EHD4Q9H223 541 aa12.25□□□□□ -0.45
DDR1-239ENST00000452441 DNAJC17Q9NVM6 304 aaKnown RBP12.25□□□□□ -0.45
DDR1-239ENST00000452441 CICQ96RK0 1608 aaPredicted RBP12.25□□□□□ -0.45
DDR1-239ENST00000452441 HEXIM1O94992 359 aaKnown RBP12.25□□□□□ -0.45
DDR1-239ENST00000452441 SSTR3P32745 418 aaPredicted RBP12.25□□□□□ -0.45
DDR1-239ENST00000452441 NPY5RQ15761 445 aa12.25□□□□□ -0.45
DDR1-239ENST00000452441 HAUS3Q68CZ6 603 aa12.25□□□□□ -0.45
DDR1-239ENST00000452441 DOCK2Q92608 1830 aa12.25□□□□□ -0.45
DDR1-239ENST00000452441 PAGR1Q9BTK6 254 aa12.25□□□□□ -0.45
DDR1-239ENST00000452441 DMGDHQ9UI17 866 aaKnown RBP12.25□□□□□ -0.45
DDR1-239ENST00000452441 BAZ2AQ9UIF9 1905 aaKnown RBP12.25□□□□□ -0.45
DDR1-239ENST00000452441 STRCQ7RTU9 1775 aa12.25□□□□□ -0.45
DDR1-239ENST00000452441 GOLGA8IPA6NC78 632 aa12.25□□□□□ -0.45
DDR1-239ENST00000452441 GOLGA8JA6NMD2 632 aa12.25□□□□□ -0.45
DDR1-239ENST00000452441 ZBTB39O15060 712 aa12.25□□□□□ -0.45
DDR1-239ENST00000452441 XRCC5P13010 732 aaKnown RBP12.25□□□□□ -0.45
DDR1-239ENST00000452441 FKBP3Q00688 224 aaKnown RBP12.25□□□□□ -0.45
DDR1-239ENST00000452441 CEP85LQ5SZL2 805 aa12.25□□□□□ -0.45
DDR1-239ENST00000452441 DDX42Q86XP3 938 aaKnown RBP eCLIP12.25□□□□□ -0.45
DDR1-239ENST00000452441 CERS5Q8N5B7 392 aa12.25□□□□□ -0.45
DDR1-239ENST00000452441 CCDC17Q96LX7 622 aa12.25□□□□□ -0.45
DDR1-239ENST00000452441 SELENOOQ9BVL4 669 aa12.25□□□□□ -0.45
DDR1-239ENST00000452441 PDGFDQ9GZP0 370 aaPredicted RBP12.25□□□□□ -0.45
DDR1-239ENST00000452441 SEMA6BQ9H3T3 888 aa12.25□□□□□ -0.45
DDR1-239ENST00000452441 JMJD4Q9H9V9 463 aa12.25□□□□□ -0.45
DDR1-239ENST00000452441 FBXO28Q9NVF7 368 aa12.25□□□□□ -0.45
DDR1-239ENST00000452441 REXO2Q9Y3B8 237 aaKnown RBP12.25□□□□□ -0.45
DDR1-239ENST00000452441 NID2Q14112 1375 aa12.24□□□□□ -0.45
DDR1-239ENST00000452441 RSPH10B2B2RC85 870 aa12.24□□□□□ -0.45
DDR1-239ENST00000452441 RSPH10BP0C881 870 aa12.24□□□□□ -0.45
DDR1-239ENST00000452441 POLD1P28340 1107 aa12.24□□□□□ -0.45
DDR1-239ENST00000452441 COASYQ13057 564 aa12.24□□□□□ -0.45
DDR1-239ENST00000452441 ZNF746Q6NUN9 644 aaPredicted RBP12.24□□□□□ -0.45
DDR1-239ENST00000452441 TRIM58Q8NG06 486 aa12.24□□□□□ -0.45
DDR1-239ENST00000452441 FAM71BQ8TC56 605 aa12.24□□□□□ -0.45
DDR1-239ENST00000452441 ZNF668Q96K58 619 aaPredicted RBP12.24□□□□□ -0.45
DDR1-239ENST00000452441 SELENOSQ9BQE4 189 aa12.24□□□□□ -0.45
DDR1-239ENST00000452441 PACSIN1Q9BY11 444 aa12.24□□□□□ -0.45
DDR1-239ENST00000452441 BCAS3Q9H6U6 928 aa12.24□□□□□ -0.45
DDR1-239ENST00000452441 SWAP70Q9UH65 585 aa12.24□□□□□ -0.45
DDR1-239ENST00000452441 PALM3A6NDB9 673 aaPredicted RBP12.24□□□□□ -0.45
DDR1-239ENST00000452441 POLRMTO00411 1230 aaKnown RBP12.24□□□□□ -0.45
DDR1-239ENST00000452441 KRT14P02533 472 aa12.24□□□□□ -0.45
DDR1-239ENST00000452441 EIF2AK2P19525 551 aaKnown RBP12.24□□□□□ -0.45
DDR1-239ENST00000452441 SLC9A1P19634 815 aa12.24□□□□□ -0.45
DDR1-239ENST00000452441 CDR1P51861 262 aa12.24□□□□□ -0.45
DDR1-239ENST00000452441 HERVK_113P62684 666 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms