RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 KBTBD13C9JR72 458 aa27.15■■□□□ 1.94
CPSF4-207ENST00000451876 BAG4O95429 457 aaKnown RBP27.15■■□□□ 1.94
CPSF4-207ENST00000451876 ZNF286BP0CG31 522 aa27.15■■□□□ 1.94
CPSF4-207ENST00000451876 ACLYP53396 1101 aa27.15■■□□□ 1.94
CPSF4-207ENST00000451876 NUCB2P80303 420 aa27.15■■□□□ 1.94
CPSF4-207ENST00000451876 ATP2C1P98194 919 aaPredicted RBP27.15■■□□□ 1.94
CPSF4-207ENST00000451876 KRT76Q01546 638 aa27.15■■□□□ 1.94
CPSF4-207ENST00000451876 DGKDQ16760 1214 aa27.15■■□□□ 1.94
CPSF4-207ENST00000451876 BRDTQ58F21 947 aaPredicted RBP27.15■■□□□ 1.94
CPSF4-207ENST00000451876 CXCL17Q6UXB2 119 aa27.15■■□□□ 1.94
CPSF4-207ENST00000451876 PCSK9Q8NBP7 692 aaKnown RBP27.15■■□□□ 1.94
CPSF4-207ENST00000451876 CHAMP1Q96JM3 812 aa27.15■■□□□ 1.94
CPSF4-207ENST00000451876 MYL3P08590 195 aa27.14■■□□□ 1.94
CPSF4-207ENST00000451876 PURAQ00577 322 aaKnown RBP27.14■■□□□ 1.94
CPSF4-207ENST00000451876 ZNF746Q6NUN9 644 aaPredicted RBP27.14■■□□□ 1.94
CPSF4-207ENST00000451876 TRIM50Q86XT4 487 aa27.14■■□□□ 1.94
CPSF4-207ENST00000451876 ANKLE1Q8NAG6 615 aa27.14■■□□□ 1.94
CPSF4-207ENST00000451876 SEPT1Q8WYJ6 367 aa27.14■■□□□ 1.94
CPSF4-207ENST00000451876 PCDHA12Q9UN75 941 aa27.14■■□□□ 1.94
CPSF4-207ENST00000451876 MYH9P35579 1960 aaKnown RBP27.14■■□□□ 1.94
CPSF4-207ENST00000451876 PPFIA4O75335 1185 aa27.13■■□□□ 1.93
CPSF4-207ENST00000451876 PPP2R5CQ13362 524 aa27.13■■□□□ 1.93
CPSF4-207ENST00000451876 FERMT2Q96AC1 680 aa27.13■■□□□ 1.93
CPSF4-207ENST00000451876 TSEN34Q9BSV6 310 aaKnown RBP27.13■■□□□ 1.93
CPSF4-207ENST00000451876 MOXD2PA6NHM9 499 aa27.12■■□□□ 1.93
CPSF4-207ENST00000451876 EML1O00423 815 aa27.12■■□□□ 1.93
CPSF4-207ENST00000451876 ATG7O95352 703 aa27.12■■□□□ 1.93
CPSF4-207ENST00000451876 LGALS2P05162 132 aa27.12■■□□□ 1.93
CPSF4-207ENST00000451876 DNM1Q05193 864 aaKnown RBP27.12■■□□□ 1.93
CPSF4-207ENST00000451876 PTPAQ15257 358 aa27.12■■□□□ 1.93
CPSF4-207ENST00000451876 TFIP11Q9UBB9 837 aaKnown RBP27.12■■□□□ 1.93
CPSF4-207ENST00000451876 TCEAL9Q9UHQ7 104 aa27.12■■□□□ 1.93
CPSF4-207ENST00000451876 PHF24Q9UPV7 400 aa27.12■■□□□ 1.93
CPSF4-207ENST00000451876 A0A1W2PQ45 241 aaPredicted RBP27.12■■□□□ 1.93
CPSF4-207ENST00000451876 A0A1W2PQY0 241 aa27.12■■□□□ 1.93
CPSF4-207ENST00000451876 POTEMA6NI47 508 aa27.12■■□□□ 1.93
CPSF4-207ENST00000451876 LAD1O00515 517 aa27.12■■□□□ 1.93
CPSF4-207ENST00000451876 ZEB2O60315 1214 aa27.12■■□□□ 1.93
CPSF4-207ENST00000451876 IL17AQ16552 155 aa27.12■■□□□ 1.93
CPSF4-207ENST00000451876 ABHD15Q6UXT9 468 aa27.12■■□□□ 1.93
CPSF4-207ENST00000451876 SMAP1Q8IYB5 467 aaPredicted RBP27.12■■□□□ 1.93
CPSF4-207ENST00000451876 PAWRQ96IZ0 340 aaKnown RBP27.12■■□□□ 1.93
CPSF4-207ENST00000451876 PCYT2Q99447 389 aa27.12■■□□□ 1.93
CPSF4-207ENST00000451876 C16orf70Q9BSU1 422 aa27.12■■□□□ 1.93
CPSF4-207ENST00000451876 POLR3EQ9NVU0 708 aa27.12■■□□□ 1.93
CPSF4-207ENST00000451876 CIZ1Q9ULV3 898 aaPredicted RBP27.12■■□□□ 1.93
CPSF4-207ENST00000451876 SAMM50Q9Y512 469 aa27.12■■□□□ 1.93
CPSF4-207ENST00000451876 WDR64B1ANS9 1081 aa27.11■■□□□ 1.93
CPSF4-207ENST00000451876 TECP42680 631 aa27.11■■□□□ 1.93
CPSF4-207ENST00000451876 UTP14CQ5TAP6 766 aaKnown RBP27.11■■□□□ 1.93
CPSF4-207ENST00000451876 CCDC60Q8IWA6 550 aaPredicted RBP27.11■■□□□ 1.93
CPSF4-207ENST00000451876 KAT2BQ92831 832 aa27.11■■□□□ 1.93
CPSF4-207ENST00000451876 DISC1Q9NRI5 854 aa27.11■■□□□ 1.93
CPSF4-207ENST00000451876 SUPT20HL2P0C7V6 817 aa27.1■■□□□ 1.93
CPSF4-207ENST00000451876 COL6A1P12109 1028 aa27.1■■□□□ 1.93
CPSF4-207ENST00000451876 PRPHP41219 470 aa27.1■■□□□ 1.93
CPSF4-207ENST00000451876 NCAPH2Q6IBW4 605 aa27.1■■□□□ 1.93
CPSF4-207ENST00000451876 MIER3Q7Z3K6 550 aa27.1■■□□□ 1.93
CPSF4-207ENST00000451876 UBE2Q1Q7Z7E8 422 aa27.1■■□□□ 1.93
CPSF4-207ENST00000451876 ZNF396Q96N95 335 aaPredicted RBP27.1■■□□□ 1.93
CPSF4-207ENST00000451876 PCDHA10Q9Y5I2 948 aa27.1■■□□□ 1.93
CPSF4-207ENST00000451876 IGKV6D-21A0A0A0MT36 114 aa27.09■■□□□ 1.93
CPSF4-207ENST00000451876 F2P00734 622 aa27.09■■□□□ 1.93
CPSF4-207ENST00000451876 CAPN2P17655 700 aa27.09■■□□□ 1.93
CPSF4-207ENST00000451876 NASPP49321 788 aaPredicted RBP27.09■■□□□ 1.93
CPSF4-207ENST00000451876 PSMC6P62333 389 aa27.09■■□□□ 1.93
CPSF4-207ENST00000451876 PPP1R13LQ8WUF5 828 aa27.09■■□□□ 1.93
CPSF4-207ENST00000451876 CEP131Q9UPN4 1083 aa27.09■■□□□ 1.93
CPSF4-207ENST00000451876 EMSYQ7Z589 1322 aa27.09■■□□□ 1.93
CPSF4-207ENST00000451876 LGR5O75473 907 aa27.08■■□□□ 1.93
CPSF4-207ENST00000451876 BMP15O95972 392 aa27.08■■□□□ 1.93
CPSF4-207ENST00000451876 SFNP31947 248 aa27.08■■□□□ 1.93
CPSF4-207ENST00000451876 JAK3P52333 1124 aa27.08■■□□□ 1.93
CPSF4-207ENST00000451876 MIS18BP1Q6P0N0 1132 aa27.08■■□□□ 1.93
CPSF4-207ENST00000451876 MTG1Q9BT17 334 aaPredicted RBP27.08■■□□□ 1.93
CPSF4-207ENST00000451876 SENP6Q9GZR1 1112 aaPredicted RBP27.08■■□□□ 1.93
CPSF4-207ENST00000451876 KPNA6O60684 536 aa27.08■■□□□ 1.93
CPSF4-207ENST00000451876 FXR2P51116 673 aaKnown RBP eCLIP27.08■■□□□ 1.93
CPSF4-207ENST00000451876 ARL6IP4Q66PJ3 421 aaKnown RBP27.08■■□□□ 1.93
CPSF4-207ENST00000451876 SWSAP1Q6NVH7 229 aa27.08■■□□□ 1.93
CPSF4-207ENST00000451876 GLT1D1Q96MS3 346 aa27.08■■□□□ 1.93
CPSF4-207ENST00000451876 PSAPP07602 524 aa27.07■■□□□ 1.92
CPSF4-207ENST00000451876 MARCKSP29966 332 aaPredicted RBP27.07■■□□□ 1.92
CPSF4-207ENST00000451876 UGCGQ16739 394 aa27.07■■□□□ 1.92
CPSF4-207ENST00000451876 DTHD1Q6ZMT9 781 aa27.07■■□□□ 1.92
CPSF4-207ENST00000451876 LINC00301Q8NCQ3 95 aa27.07■■□□□ 1.92
CPSF4-207ENST00000451876 C11orf49Q9H6J7 331 aa27.07■■□□□ 1.92
CPSF4-207ENST00000451876 STARD7Q9NQZ5 370 aa27.07■■□□□ 1.92
CPSF4-207ENST00000451876 CHMP5Q9NZZ3 219 aa27.07■■□□□ 1.92
CPSF4-207ENST00000451876 ALPK3Q96L96 1907 aa27.07■■□□□ 1.92
CPSF4-207ENST00000451876 VWA3AA6NCI4 1184 aa27.06■■□□□ 1.92
CPSF4-207ENST00000451876 H3BRB1 525 aa27.06■■□□□ 1.92
CPSF4-207ENST00000451876 BACH1O14867 736 aa27.06■■□□□ 1.92
CPSF4-207ENST00000451876 GRIN1Q05586 938 aa27.06■■□□□ 1.92
CPSF4-207ENST00000451876 SLC39A14Q15043 492 aa27.06■■□□□ 1.92
CPSF4-207ENST00000451876 TMEM266Q2M3C6 531 aa27.06■■□□□ 1.92
CPSF4-207ENST00000451876 RDM1Q8NG50 284 aa27.06■■□□□ 1.92
CPSF4-207ENST00000451876 GLG1Q92896 1179 aa27.06■■□□□ 1.92
CPSF4-207ENST00000451876 TUT1Q9H6E5 874 aaKnown RBP27.06■■□□□ 1.92
CPSF4-207ENST00000451876 GABBR1Q9UBS5 961 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms