RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 HDAC6Q9UBN7 1215 aa13.65□□□□□ -0.22
SMPD4-212ENST00000451542 GTF2IRD1Q9UHL9 959 aa13.65□□□□□ -0.22
SMPD4-212ENST00000451542 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.65□□□□□ -0.22
SMPD4-212ENST00000451542 DOCK5Q9H7D0 1870 aa13.65□□□□□ -0.22
SMPD4-212ENST00000451542 IGLV3-22A0A075B6J6 115 aa13.64□□□□□ -0.23
SMPD4-212ENST00000451542 C17orf102A2RUQ5 167 aa13.64□□□□□ -0.23
SMPD4-212ENST00000451542 M0R2N6 131 aa13.64□□□□□ -0.23
SMPD4-212ENST00000451542 DDX39AO00148 427 aaKnown RBP13.64□□□□□ -0.23
SMPD4-212ENST00000451542 GAS7O60861 476 aa13.64□□□□□ -0.23
SMPD4-212ENST00000451542 ACTR2P61160 394 aa13.64□□□□□ -0.23
SMPD4-212ENST00000451542 INF2Q27J81 1249 aa13.64□□□□□ -0.23
SMPD4-212ENST00000451542 LETM2Q2VYF4 491 aa13.64□□□□□ -0.23
SMPD4-212ENST00000451542 Q4G0T1 1027 aa13.64□□□□□ -0.23
SMPD4-212ENST00000451542 KRT40Q6A162 431 aa13.64□□□□□ -0.23
SMPD4-212ENST00000451542 MFSD5Q6N075 450 aa13.64□□□□□ -0.23
SMPD4-212ENST00000451542 ZNF746Q6NUN9 644 aaPredicted RBP13.64□□□□□ -0.23
SMPD4-212ENST00000451542 PIK3AP1Q6ZUJ8 805 aa13.64□□□□□ -0.23
SMPD4-212ENST00000451542 SMAP1Q8IYB5 467 aaPredicted RBP13.64□□□□□ -0.23
SMPD4-212ENST00000451542 DIS3L2Q8IYB7 885 aaKnown RBP13.64□□□□□ -0.23
SMPD4-212ENST00000451542 RPUSD2Q8IZ73 545 aaKnown RBP13.64□□□□□ -0.23
SMPD4-212ENST00000451542 CAGE1Q8TC20 777 aa13.64□□□□□ -0.23
SMPD4-212ENST00000451542 TMX3Q96JJ7 454 aa13.64□□□□□ -0.23
SMPD4-212ENST00000451542 RIT2Q99578 217 aa13.64□□□□□ -0.23
SMPD4-212ENST00000451542 TEKT3Q9BXF9 490 aa13.64□□□□□ -0.23
SMPD4-212ENST00000451542 PPP1R12CQ9BZL4 782 aa13.64□□□□□ -0.23
SMPD4-212ENST00000451542 SAMM50Q9Y512 469 aa13.64□□□□□ -0.23
SMPD4-212ENST00000451542 EMSYQ7Z589 1322 aa13.64□□□□□ -0.23
SMPD4-212ENST00000451542 CYP3A7-CYP3A51PA0A087WV96 503 aa13.63□□□□□ -0.23
SMPD4-212ENST00000451542 GSTTP1A0A1W2PQM5 241 aa13.63□□□□□ -0.23
SMPD4-212ENST00000451542 PITPNM1O00562 1244 aa13.63□□□□□ -0.23
SMPD4-212ENST00000451542 BACH1O14867 736 aa13.63□□□□□ -0.23
SMPD4-212ENST00000451542 PARNO95453 639 aaKnown RBP13.63□□□□□ -0.23
SMPD4-212ENST00000451542 CYP3A7P24462 503 aa13.63□□□□□ -0.23
SMPD4-212ENST00000451542 SFNP31947 248 aa13.63□□□□□ -0.23
SMPD4-212ENST00000451542 STAT5BP51692 787 aa13.63□□□□□ -0.23
SMPD4-212ENST00000451542 NPY5RQ15761 445 aa13.63□□□□□ -0.23
SMPD4-212ENST00000451542 PPP4R3AQ6IN85 833 aa13.63□□□□□ -0.23
SMPD4-212ENST00000451542 TDHQ8IZJ6 230 aa13.63□□□□□ -0.23
SMPD4-212ENST00000451542 MTIF3Q9H2K0 278 aaKnown RBP13.63□□□□□ -0.23
SMPD4-212ENST00000451542 BCAS3Q9H6U6 928 aa13.63□□□□□ -0.23
SMPD4-212ENST00000451542 DDX25Q9UHL0 483 aaKnown RBP13.63□□□□□ -0.23
SMPD4-212ENST00000451542 NRCAMQ92823 1304 aa13.63□□□□□ -0.23
SMPD4-212ENST00000451542 RRN3P2A6NIE6 340 aa13.62□□□□□ -0.23
SMPD4-212ENST00000451542 WDR64B1ANS9 1081 aa13.62□□□□□ -0.23
SMPD4-212ENST00000451542 ADAMTS3O15072 1205 aa13.62□□□□□ -0.23
SMPD4-212ENST00000451542 CCNT1O60563 726 aaKnown RBP13.62□□□□□ -0.23
SMPD4-212ENST00000451542 BAG4O95429 457 aaKnown RBP13.62□□□□□ -0.23
SMPD4-212ENST00000451542 RPLP2P05387 115 aaKnown RBP13.62□□□□□ -0.23
SMPD4-212ENST00000451542 PSAPP07602 524 aa13.62□□□□□ -0.23
SMPD4-212ENST00000451542 CYP2C9P11712 490 aa13.62□□□□□ -0.23
SMPD4-212ENST00000451542 JAK3P52333 1124 aa13.62□□□□□ -0.23
SMPD4-212ENST00000451542 FOSBP53539 338 aa13.62□□□□□ -0.23
SMPD4-212ENST00000451542 ST3GAL1Q11201 340 aa13.62□□□□□ -0.23
SMPD4-212ENST00000451542 PTK7Q13308 1070 aa13.62□□□□□ -0.23
SMPD4-212ENST00000451542 ITGB3BPQ13352 177 aaPredicted RBP13.62□□□□□ -0.23
SMPD4-212ENST00000451542 LRCH2Q5VUJ6 765 aa13.62□□□□□ -0.23
SMPD4-212ENST00000451542 GDF6Q6KF10 455 aaPredicted RBP13.62□□□□□ -0.23
SMPD4-212ENST00000451542 PLPPR4Q7Z2D5 763 aa13.62□□□□□ -0.23
SMPD4-212ENST00000451542 FBXO18Q8NFZ0 1043 aa13.62□□□□□ -0.23
SMPD4-212ENST00000451542 AFAP1L1Q8TED9 768 aa13.62□□□□□ -0.23
SMPD4-212ENST00000451542 ATP6V0A1Q93050 837 aa13.62□□□□□ -0.23
SMPD4-212ENST00000451542 FAM20AQ96MK3 541 aa13.62□□□□□ -0.23
SMPD4-212ENST00000451542 NOC4LQ9BVI4 516 aaKnown RBP13.62□□□□□ -0.23
SMPD4-212ENST00000451542 GJB4Q9NTQ9 266 aa13.62□□□□□ -0.23
SMPD4-212ENST00000451542 SMC3Q9UQE7 1217 aa13.62□□□□□ -0.23
SMPD4-212ENST00000451542 PCDHA10Q9Y5I2 948 aa13.62□□□□□ -0.23
SMPD4-212ENST00000451542 BTBD18B2RXH4 712 aa13.61□□□□□ -0.23
SMPD4-212ENST00000451542 TBX3O15119 743 aa13.61□□□□□ -0.23
SMPD4-212ENST00000451542 MSH4O15457 936 aa13.61□□□□□ -0.23
SMPD4-212ENST00000451542 LGR5O75473 907 aa13.61□□□□□ -0.23
SMPD4-212ENST00000451542 ATG7O95352 703 aa13.61□□□□□ -0.23
SMPD4-212ENST00000451542 TDP2O95551 362 aa13.61□□□□□ -0.23
SMPD4-212ENST00000451542 PFKMP08237 780 aa13.61□□□□□ -0.23
SMPD4-212ENST00000451542 SMIM10L2AP0DMW4 78 aa13.61□□□□□ -0.23
SMPD4-212ENST00000451542 SMIM10L2BP0DMW5 78 aa13.61□□□□□ -0.23
SMPD4-212ENST00000451542 CYP2C18P33260 490 aa13.61□□□□□ -0.23
SMPD4-212ENST00000451542 RFC2P35250 354 aa13.61□□□□□ -0.23
SMPD4-212ENST00000451542 PPFIA1Q13136 1202 aa13.61□□□□□ -0.23
SMPD4-212ENST00000451542 NR5A1Q13285 461 aa13.61□□□□□ -0.23
SMPD4-212ENST00000451542 HABP4Q5JVS0 413 aaKnown RBP13.61□□□□□ -0.23
SMPD4-212ENST00000451542 PSRC1Q6PGN9 363 aaPredicted RBP13.61□□□□□ -0.23
SMPD4-212ENST00000451542 TRIM50Q86XT4 487 aa13.61□□□□□ -0.23
SMPD4-212ENST00000451542 SLFN12Q8IYM2 578 aa13.61□□□□□ -0.23
SMPD4-212ENST00000451542 RDM1Q8NG50 284 aa13.61□□□□□ -0.23
SMPD4-212ENST00000451542 OXER1Q8TDS5 423 aa13.61□□□□□ -0.23
SMPD4-212ENST00000451542 SLC5A5Q92911 643 aa13.61□□□□□ -0.23
SMPD4-212ENST00000451542 FOXP1Q9H334 677 aaPredicted RBP13.61□□□□□ -0.23
SMPD4-212ENST00000451542 PRO3102Q9H379 93 aa13.61□□□□□ -0.23
SMPD4-212ENST00000451542 ZNF302Q9NR11 478 aa13.61□□□□□ -0.23
SMPD4-212ENST00000451542 NOL7Q9UMY1 257 aaKnown RBP13.61□□□□□ -0.23
SMPD4-212ENST00000451542 TRPC6Q9Y210 931 aa13.61□□□□□ -0.23
SMPD4-212ENST00000451542 LTBP2Q14767 1821 aa13.6□□□□□ -0.23
SMPD4-212ENST00000451542 MYH9P35579 1960 aaKnown RBP13.6□□□□□ -0.23
SMPD4-212ENST00000451542 H3BQV1 296 aa13.6□□□□□ -0.23
SMPD4-212ENST00000451542 DHX15O43143 795 aaKnown RBP13.6□□□□□ -0.23
SMPD4-212ENST00000451542 DKC1O60832 514 aaKnown RBP eCLIP13.6□□□□□ -0.23
SMPD4-212ENST00000451542 DTNBO60941 627 aa13.6□□□□□ -0.23
SMPD4-212ENST00000451542 GUCY1B3Q02153 619 aa13.6□□□□□ -0.23
SMPD4-212ENST00000451542 TAF2Q6P1X5 1199 aa13.6□□□□□ -0.23
SMPD4-212ENST00000451542 PDXDC2PQ6P474 469 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms