RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 PRDM5Q9NQX1 630 aaPredicted RBP14.8□□□□□ -0.04
SNRNP27-203ENST00000450162 ERAP1Q9NZ08 941 aa14.8□□□□□ -0.04
SNRNP27-203ENST00000450162 PKD2L1Q9P0L9 805 aa14.8□□□□□ -0.04
SNRNP27-203ENST00000450162 GTF2IRD1Q9UHL9 959 aa14.8□□□□□ -0.04
SNRNP27-203ENST00000450162 TBX21Q9UL17 535 aa14.8□□□□□ -0.04
SNRNP27-203ENST00000450162 ZMYND8Q9ULU4 1186 aaPredicted RBP14.8□□□□□ -0.04
SNRNP27-203ENST00000450162 EMSYQ7Z589 1322 aa14.8□□□□□ -0.04
SNRNP27-203ENST00000450162 TNRC18O15417 2968 aaPredicted RBP14.79□□□□□ -0.04
SNRNP27-203ENST00000450162 GSTTP1A0A1W2PQM5 241 aa14.79□□□□□ -0.04
SNRNP27-203ENST00000450162 MYH7BA7E2Y1 1941 aa14.79□□□□□ -0.04
SNRNP27-203ENST00000450162 TBX3O15119 743 aa14.79□□□□□ -0.04
SNRNP27-203ENST00000450162 B4GALT4O60513 344 aa14.79□□□□□ -0.04
SNRNP27-203ENST00000450162 DTNBO60941 627 aa14.79□□□□□ -0.04
SNRNP27-203ENST00000450162 LGR5O75473 907 aa14.79□□□□□ -0.04
SNRNP27-203ENST00000450162 TIMP1P01033 207 aa14.79□□□□□ -0.04
SNRNP27-203ENST00000450162 ZNF286BP0CG31 522 aa14.79□□□□□ -0.04
SNRNP27-203ENST00000450162 GNAT1P11488 350 aa14.79□□□□□ -0.04
SNRNP27-203ENST00000450162 RAG1P15918 1043 aa14.79□□□□□ -0.04
SNRNP27-203ENST00000450162 SYN1P17600 705 aa14.79□□□□□ -0.04
SNRNP27-203ENST00000450162 BMP8BP34820 402 aa14.79□□□□□ -0.04
SNRNP27-203ENST00000450162 ACTR2P61160 394 aa14.79□□□□□ -0.04
SNRNP27-203ENST00000450162 SP4Q02446 784 aa14.79□□□□□ -0.04
SNRNP27-203ENST00000450162 NR5A1Q13285 461 aa14.79□□□□□ -0.04
SNRNP27-203ENST00000450162 CUL4AQ13619 759 aa14.79□□□□□ -0.04
SNRNP27-203ENST00000450162 LETM2Q2VYF4 491 aa14.79□□□□□ -0.04
SNRNP27-203ENST00000450162 PLPPR4Q7Z2D5 763 aa14.79□□□□□ -0.04
SNRNP27-203ENST00000450162 SLC5A5Q92911 643 aa14.79□□□□□ -0.04
SNRNP27-203ENST00000450162 SNX21Q969T3 373 aa14.79□□□□□ -0.04
SNRNP27-203ENST00000450162 ALPK3Q96L96 1907 aa14.79□□□□□ -0.04
SNRNP27-203ENST00000450162 FAM20AQ96MK3 541 aa14.79□□□□□ -0.04
SNRNP27-203ENST00000450162 DDX25Q9UHL0 483 aaKnown RBP14.79□□□□□ -0.04
SNRNP27-203ENST00000450162 SMC3Q9UQE7 1217 aa14.79□□□□□ -0.04
SNRNP27-203ENST00000450162 CEP290O15078 2479 aa14.78□□□□□ -0.04
SNRNP27-203ENST00000450162 A0A1W2PPC1 479 aa14.78□□□□□ -0.04
SNRNP27-203ENST00000450162 TRIM43BA6NCK2 446 aa14.78□□□□□ -0.04
SNRNP27-203ENST00000450162 MSH4O15457 936 aa14.78□□□□□ -0.04
SNRNP27-203ENST00000450162 CCNT1O60563 726 aaKnown RBP14.78□□□□□ -0.04
SNRNP27-203ENST00000450162 SFNP31947 248 aa14.78□□□□□ -0.04
SNRNP27-203ENST00000450162 ORC2Q13416 577 aaPredicted RBP14.78□□□□□ -0.04
SNRNP27-203ENST00000450162 GNL2Q13823 731 aaKnown RBP14.78□□□□□ -0.04
SNRNP27-203ENST00000450162 UTP14CQ5TAP6 766 aaKnown RBP14.78□□□□□ -0.04
SNRNP27-203ENST00000450162 MIS18BP1Q6P0N0 1132 aa14.78□□□□□ -0.04
SNRNP27-203ENST00000450162 RDM1Q8NG50 284 aa14.78□□□□□ -0.04
SNRNP27-203ENST00000450162 GLG1Q92896 1179 aa14.78□□□□□ -0.04
SNRNP27-203ENST00000450162 TRIM43Q96BQ3 446 aaPredicted RBP14.78□□□□□ -0.04
SNRNP27-203ENST00000450162 INTS4Q96HW7 963 aaKnown RBP14.78□□□□□ -0.04
SNRNP27-203ENST00000450162 GDF15Q99988 308 aa14.78□□□□□ -0.04
SNRNP27-203ENST00000450162 TEKT3Q9BXF9 490 aa14.78□□□□□ -0.04
SNRNP27-203ENST00000450162 TRPV6Q9H1D0 765 aa14.78□□□□□ -0.04
SNRNP27-203ENST00000450162 NOD1Q9Y239 953 aa14.78□□□□□ -0.04
SNRNP27-203ENST00000450162 PCDHA10Q9Y5I2 948 aa14.78□□□□□ -0.04
SNRNP27-203ENST00000450162 NRCAMQ92823 1304 aa14.77□□□□□ -0.04
SNRNP27-203ENST00000450162 IGKV6D-21A0A0A0MT36 114 aa14.77□□□□□ -0.05
SNRNP27-203ENST00000450162 GAS7O60861 476 aa14.77□□□□□ -0.05
SNRNP27-203ENST00000450162 BAG4O95429 457 aaKnown RBP14.77□□□□□ -0.05
SNRNP27-203ENST00000450162 TDP2O95551 362 aa14.77□□□□□ -0.05
SNRNP27-203ENST00000450162 PDCP20941 246 aa14.77□□□□□ -0.05
SNRNP27-203ENST00000450162 U2AF2P26368 475 aaKnown RBP eCLIP14.77□□□□□ -0.051e-7■■□□□ 13
SNRNP27-203ENST00000450162 GJB2P29033 226 aa14.77□□□□□ -0.05
SNRNP27-203ENST00000450162 TRAPPC10P48553 1259 aa14.77□□□□□ -0.05
SNRNP27-203ENST00000450162 STAT5BP51692 787 aa14.77□□□□□ -0.05
SNRNP27-203ENST00000450162 CHMP4BP1P59074 171 aa14.77□□□□□ -0.05
SNRNP27-203ENST00000450162 BFSP2Q13515 415 aa14.77□□□□□ -0.05
SNRNP27-203ENST00000450162 PTGISQ16647 500 aa14.77□□□□□ -0.05
SNRNP27-203ENST00000450162 LRCH2Q5VUJ6 765 aa14.77□□□□□ -0.05
SNRNP27-203ENST00000450162 FAM160B1Q5W0V3 765 aa14.77□□□□□ -0.05
SNRNP27-203ENST00000450162 ABHD15Q6UXT9 468 aa14.77□□□□□ -0.05
SNRNP27-203ENST00000450162 SH3RF1Q7Z6J0 888 aa14.77□□□□□ -0.05
SNRNP27-203ENST00000450162 SLFN12Q8IYM2 578 aa14.77□□□□□ -0.05
SNRNP27-203ENST00000450162 CCDC155Q8N6L0 562 aa14.77□□□□□ -0.05
SNRNP27-203ENST00000450162 AFAP1L1Q8TED9 768 aa14.77□□□□□ -0.05
SNRNP27-203ENST00000450162 KCNMB3Q9NPA1 279 aa14.77□□□□□ -0.05
SNRNP27-203ENST00000450162 TRMT13Q9NUP7 481 aaKnown RBP14.77□□□□□ -0.05
SNRNP27-203ENST00000450162 HDAC6Q9UBN7 1215 aa14.77□□□□□ -0.05
SNRNP27-203ENST00000450162 C17orf102A2RUQ5 167 aa14.76□□□□□ -0.05
SNRNP27-203ENST00000450162 RRN3P2A6NIE6 340 aa14.76□□□□□ -0.05
SNRNP27-203ENST00000450162 WDR64B1ANS9 1081 aa14.76□□□□□ -0.05
SNRNP27-203ENST00000450162 K7ELQ4 463 aaPredicted RBP14.76□□□□□ -0.05
SNRNP27-203ENST00000450162 PITPNM1O00562 1244 aa14.76□□□□□ -0.05
SNRNP27-203ENST00000450162 MARCH6O60337 910 aa14.76□□□□□ -0.05
SNRNP27-203ENST00000450162 PSMD10O75832 226 aa14.76□□□□□ -0.05
SNRNP27-203ENST00000450162 CCNE2O96020 404 aa14.76□□□□□ -0.05
SNRNP27-203ENST00000450162 PSAPP07602 524 aa14.76□□□□□ -0.05
SNRNP27-203ENST00000450162 HOXC8P31273 242 aa14.76□□□□□ -0.05
SNRNP27-203ENST00000450162 MAGEA10P43363 369 aaPredicted RBP14.76□□□□□ -0.05
SNRNP27-203ENST00000450162 JAK3P52333 1124 aa14.76□□□□□ -0.05
SNRNP27-203ENST00000450162 GUCY1B3Q02153 619 aa14.76□□□□□ -0.05
SNRNP27-203ENST00000450162 EARS2Q5JPH6 523 aaKnown RBP14.76□□□□□ -0.05
SNRNP27-203ENST00000450162 MFSD5Q6N075 450 aa14.76□□□□□ -0.05
SNRNP27-203ENST00000450162 NOSTRINQ8IVI9 506 aa14.76□□□□□ -0.05
SNRNP27-203ENST00000450162 TMEM199Q8N511 208 aa14.76□□□□□ -0.05
SNRNP27-203ENST00000450162 ETNPPLQ8TBG4 499 aa14.76□□□□□ -0.05
SNRNP27-203ENST00000450162 CAGE1Q8TC20 777 aa14.76□□□□□ -0.05
SNRNP27-203ENST00000450162 HIPK3Q9H422 1215 aa14.76□□□□□ -0.05
SNRNP27-203ENST00000450162 H3BQV1 296 aa14.75□□□□□ -0.05
SNRNP27-203ENST00000450162 DDX39AO00148 427 aaKnown RBP14.75□□□□□ -0.05
SNRNP27-203ENST00000450162 BACH1O14867 736 aa14.75□□□□□ -0.05
SNRNP27-203ENST00000450162 PARNO95453 639 aaKnown RBP14.75□□□□□ -0.05
SNRNP27-203ENST00000450162 RPLP2P05387 115 aaKnown RBP14.75□□□□□ -0.05
SNRNP27-203ENST00000450162 SMIM10L2AP0DMW4 78 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms