RNA–Protein interactions for RNA: ENST00000449504.5

HDLBP-222, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-222ENST00000449504 RC3H2Q9HBD1 1191 aaKnown RBP8.43□□□□□ -1.06
HDLBP-222ENST00000449504 COL20A1Q9P218 1284 aa8.43□□□□□ -1.06
HDLBP-222ENST00000449504 CDH22Q9UJ99 828 aa8.43□□□□□ -1.06
HDLBP-222ENST00000449504 PNMA2Q9UL42 364 aa8.43□□□□□ -1.06
HDLBP-222ENST00000449504 NR2E1Q9Y466 385 aa8.43□□□□□ -1.06
HDLBP-222ENST00000449504 SUPT16HQ9Y5B9 1047 aaKnown RBP8.43□□□□□ -1.06
HDLBP-222ENST00000449504 R4GN57 208 aa8.43□□□□□ -1.06
HDLBP-222ENST00000449504 RALGAPA2Q2PPJ7 1873 aa8.43□□□□□ -1.06
HDLBP-222ENST00000449504 C2CD4DB7Z1M9 353 aa8.42□□□□□ -1.06
HDLBP-222ENST00000449504 RNF113AO15541 343 aaKnown RBP8.42□□□□□ -1.06
HDLBP-222ENST00000449504 CAND2O75155 1236 aa8.42□□□□□ -1.06
HDLBP-222ENST00000449504 EIF3JO75822 258 aaKnown RBP8.42□□□□□ -1.06
HDLBP-222ENST00000449504 SRGAP2BP0DMP2 458 aa8.42□□□□□ -1.06
HDLBP-222ENST00000449504 RLBP1P12271 317 aa8.42□□□□□ -1.06
HDLBP-222ENST00000449504 DUSP6Q16828 381 aa8.42□□□□□ -1.06
HDLBP-222ENST00000449504 RSPO4Q2I0M5 234 aaPredicted RBP8.42□□□□□ -1.06
HDLBP-222ENST00000449504 CELF3Q5SZQ8 465 aaKnown RBP8.42□□□□□ -1.06
HDLBP-222ENST00000449504 SPOUT1Q5T280 376 aaKnown RBP8.42□□□□□ -1.06
HDLBP-222ENST00000449504 ANKRD54Q6NXT1 300 aa8.42□□□□□ -1.06
HDLBP-222ENST00000449504 DCLK2Q8N568 766 aa8.42□□□□□ -1.06
HDLBP-222ENST00000449504 CYP2W1Q8TAV3 490 aa8.42□□□□□ -1.06
HDLBP-222ENST00000449504 ATP8B4Q8TF62 1192 aa8.42□□□□□ -1.06
HDLBP-222ENST00000449504 ZFP91Q96JP5 570 aaPredicted RBP8.42□□□□□ -1.06
HDLBP-222ENST00000449504 IWS1Q96ST2 819 aa8.42□□□□□ -1.06
HDLBP-222ENST00000449504 S1PR5Q9H228 398 aa8.42□□□□□ -1.06
HDLBP-222ENST00000449504 MLXIPQ9HAP2 919 aa8.42□□□□□ -1.06
HDLBP-222ENST00000449504 TOMM22Q9NS69 142 aa8.42□□□□□ -1.06
HDLBP-222ENST00000449504 RALYQ9UKM9 306 aaKnown RBP8.42□□□□□ -1.06
HDLBP-222ENST00000449504 ATG2AQ2TAZ0 1938 aa8.42□□□□□ -1.06
HDLBP-222ENST00000449504 WDR19Q8NEZ3 1342 aa8.41□□□□□ -1.06
HDLBP-222ENST00000449504 STK25O00506 426 aa8.41□□□□□ -1.06
HDLBP-222ENST00000449504 CHRNA1P02708 482 aa8.41□□□□□ -1.06
HDLBP-222ENST00000449504 NR3C2P08235 984 aa8.41□□□□□ -1.06
HDLBP-222ENST00000449504 TOP1P11387 765 aaKnown RBP8.41□□□□□ -1.06
HDLBP-222ENST00000449504 GNAT1P11488 350 aa8.41□□□□□ -1.06
HDLBP-222ENST00000449504 GATMP50440 423 aa8.41□□□□□ -1.06
HDLBP-222ENST00000449504 ERVFC1P60507 584 aa8.41□□□□□ -1.06
HDLBP-222ENST00000449504 ARHGAP4P98171 946 aa8.41□□□□□ -1.06
HDLBP-222ENST00000449504 LPIN1Q14693 890 aa8.41□□□□□ -1.06
HDLBP-222ENST00000449504 RRP12Q5JTH9 1297 aaKnown RBP8.41□□□□□ -1.06
HDLBP-222ENST00000449504 FAM26DQ5JW98 314 aa8.41□□□□□ -1.06
HDLBP-222ENST00000449504 CWF19L1Q69YN2 538 aaKnown RBP8.41□□□□□ -1.06
HDLBP-222ENST00000449504 SYCE2Q6PIF2 218 aa8.41□□□□□ -1.06
HDLBP-222ENST00000449504 CMTR2Q8IYT2 770 aaKnown RBP8.41□□□□□ -1.06
HDLBP-222ENST00000449504 KBTBD3Q8NAB2 608 aa8.41□□□□□ -1.06
HDLBP-222ENST00000449504 DTWD2Q8NBA8 298 aa8.41□□□□□ -1.06
HDLBP-222ENST00000449504 RGS22Q8NE09 1264 aa8.41□□□□□ -1.06
HDLBP-222ENST00000449504 CHAMP1Q96JM3 812 aa8.41□□□□□ -1.06
HDLBP-222ENST00000449504 SEC62Q99442 399 aaKnown RBP8.41□□□□□ -1.06
HDLBP-222ENST00000449504 TMEM47Q9BQJ4 181 aa8.41□□□□□ -1.06
HDLBP-222ENST00000449504 UBA5Q9GZZ9 404 aa8.41□□□□□ -1.06
HDLBP-222ENST00000449504 CPVLQ9H3G5 476 aa8.41□□□□□ -1.06
HDLBP-222ENST00000449504 DLL3Q9NYJ7 618 aa8.41□□□□□ -1.06
HDLBP-222ENST00000449504 LIMD1Q9UGP4 676 aa8.41□□□□□ -1.06
HDLBP-222ENST00000449504 METRNQ9UJH8 293 aa8.41□□□□□ -1.06
HDLBP-222ENST00000449504 CACNA1HO95180 2353 aa8.41□□□□□ -1.06
HDLBP-222ENST00000449504 MYO15AQ9UKN7 3530 aa8.41□□□□□ -1.06
HDLBP-222ENST00000449504 DCHS1Q96JQ0 3298 aa8.4□□□□□ -1.06
HDLBP-222ENST00000449504 NOP56O00567 594 aaKnown RBP8.4□□□□□ -1.06
HDLBP-222ENST00000449504 RAB11FIP3O75154 756 aa8.4□□□□□ -1.06
HDLBP-222ENST00000449504 CFBP00751 764 aa8.4□□□□□ -1.06
HDLBP-222ENST00000449504 LGALS2P05162 132 aa8.4□□□□□ -1.06
HDLBP-222ENST00000449504 GOLGA8HP0CJ92 632 aa8.4□□□□□ -1.06
HDLBP-222ENST00000449504 PDHBP11177 359 aa8.4□□□□□ -1.06
HDLBP-222ENST00000449504 HOXD8P13378 290 aaPredicted RBP8.4□□□□□ -1.06
HDLBP-222ENST00000449504 AOC1P19801 751 aa8.4□□□□□ -1.06
HDLBP-222ENST00000449504 SP2Q02086 613 aa8.4□□□□□ -1.06
HDLBP-222ENST00000449504 ZNF543Q08ER8 600 aa8.4□□□□□ -1.06
HDLBP-222ENST00000449504 APOBRQ0VD83 1088 aa8.4□□□□□ -1.06
HDLBP-222ENST00000449504 COL9A2Q14055 689 aaPredicted RBP8.4□□□□□ -1.06
HDLBP-222ENST00000449504 UTP14CQ5TAP6 766 aaKnown RBP8.4□□□□□ -1.06
HDLBP-222ENST00000449504 PLPP4Q5VZY2 271 aa8.4□□□□□ -1.06
HDLBP-222ENST00000449504 MCF2L2Q86YR7 1114 aa8.4□□□□□ -1.06
HDLBP-222ENST00000449504 CCDC105Q8IYK2 499 aa8.4□□□□□ -1.06
HDLBP-222ENST00000449504 RIN2Q8WYP3 895 aaPredicted RBP8.4□□□□□ -1.06
HDLBP-222ENST00000449504 CDCA3Q99618 268 aaPredicted RBP8.4□□□□□ -1.06
HDLBP-222ENST00000449504 SEMA4AQ9H3S1 761 aa8.4□□□□□ -1.06
HDLBP-222ENST00000449504 POMKQ9H5K3 350 aa8.4□□□□□ -1.06
HDLBP-222ENST00000449504 BCAS3Q9H6U6 928 aa8.4□□□□□ -1.06
HDLBP-222ENST00000449504 PXMP2Q9NR77 195 aa8.4□□□□□ -1.06
HDLBP-222ENST00000449504 TMEM260Q9NX78 707 aa8.4□□□□□ -1.06
HDLBP-222ENST00000449504 LRFN2Q9ULH4 789 aa8.4□□□□□ -1.06
HDLBP-222ENST00000449504 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.4□□□□□ -1.06
HDLBP-222ENST00000449504 PCDHB12Q9Y5F1 795 aa8.4□□□□□ -1.06
HDLBP-222ENST00000449504 CACNA1BQ00975 2339 aa8.4□□□□□ -1.07
HDLBP-222ENST00000449504 ABCB11O95342 1321 aa8.39□□□□□ -1.07
HDLBP-222ENST00000449504 FAM186AA6NE01 2351 aa8.39□□□□□ -1.07
HDLBP-222ENST00000449504 SMARCA5O60264 1052 aaPredicted RBP8.39□□□□□ -1.07
HDLBP-222ENST00000449504 HMMRO75330 724 aa8.39□□□□□ -1.07
HDLBP-222ENST00000449504 FGF18O76093 207 aa8.39□□□□□ -1.07
HDLBP-222ENST00000449504 ZFYP08048 801 aaPredicted RBP8.39□□□□□ -1.07
HDLBP-222ENST00000449504 WEE2P0C1S8 567 aa8.39□□□□□ -1.07
HDLBP-222ENST00000449504 STAG3L1P0CL83 205 aa8.39□□□□□ -1.07
HDLBP-222ENST00000449504 HSPD1P10809 573 aaKnown RBP8.39□□□□□ -1.07
HDLBP-222ENST00000449504 UBA1P22314 1058 aaKnown RBP8.39□□□□□ -1.07
HDLBP-222ENST00000449504 HOXC8P31273 242 aa8.39□□□□□ -1.07
HDLBP-222ENST00000449504 CD52P31358 61 aa8.39□□□□□ -1.07
HDLBP-222ENST00000449504 CES5AQ6NT32 575 aa8.39□□□□□ -1.07
HDLBP-222ENST00000449504 KCNV1Q6PIU1 500 aa8.39□□□□□ -1.07
HDLBP-222ENST00000449504 RUFY4Q6ZNE9 571 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms