RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 PKP1Q13835 747 aa12.04□□□□□ -0.48
SMPD4-211ENST00000449159 BECN1Q14457 450 aa12.04□□□□□ -0.48
SMPD4-211ENST00000449159 TTC38Q5R3I4 469 aa12.04□□□□□ -0.48
SMPD4-211ENST00000449159 TRIM50Q86XT4 487 aa12.04□□□□□ -0.48
SMPD4-211ENST00000449159 DEFB123Q8N688 67 aa12.04□□□□□ -0.48
SMPD4-211ENST00000449159 GIMAP8Q8ND71 665 aaPredicted RBP12.04□□□□□ -0.48
SMPD4-211ENST00000449159 SLC5A5Q92911 643 aa12.04□□□□□ -0.48
SMPD4-211ENST00000449159 SDF4Q9BRK5 362 aa12.04□□□□□ -0.48
SMPD4-211ENST00000449159 KCNMB3Q9NPA1 279 aa12.04□□□□□ -0.48
SMPD4-211ENST00000449159 SLC9A2Q9UBY0 812 aa12.04□□□□□ -0.48
SMPD4-211ENST00000449159 KAT6AQ92794 2004 aa12.03□□□□□ -0.48
SMPD4-211ENST00000449159 GSTTP1A0A1W2PQM5 241 aa12.03□□□□□ -0.48
SMPD4-211ENST00000449159 NEMFO60524 1076 aa12.03□□□□□ -0.48
SMPD4-211ENST00000449159 LGALS2P05162 132 aa12.03□□□□□ -0.48
SMPD4-211ENST00000449159 MCM7P33993 719 aa12.03□□□□□ -0.48
SMPD4-211ENST00000449159 TCF7P36402 384 aaPredicted RBP12.03□□□□□ -0.48
SMPD4-211ENST00000449159 CHMP4BP1P59074 171 aa12.03□□□□□ -0.48
SMPD4-211ENST00000449159 ACTR2P61160 394 aa12.03□□□□□ -0.48
SMPD4-211ENST00000449159 RESTQ13127 1097 aa12.03□□□□□ -0.48
SMPD4-211ENST00000449159 ZNF174Q15697 407 aa12.03□□□□□ -0.48
SMPD4-211ENST00000449159 DGKDQ16760 1214 aa12.03□□□□□ -0.48
SMPD4-211ENST00000449159 LRRC26Q2I0M4 334 aa12.03□□□□□ -0.48
SMPD4-211ENST00000449159 LRIT3Q3SXY7 679 aa12.03□□□□□ -0.48
SMPD4-211ENST00000449159 BRDTQ58F21 947 aaPredicted RBP12.03□□□□□ -0.48
SMPD4-211ENST00000449159 LRCH2Q5VUJ6 765 aa12.03□□□□□ -0.48
SMPD4-211ENST00000449159 KAT2BQ92831 832 aa12.03□□□□□ -0.48
SMPD4-211ENST00000449159 HAS1Q92839 578 aa12.03□□□□□ -0.48
SMPD4-211ENST00000449159 GLT1D1Q96MS3 346 aa12.03□□□□□ -0.48
SMPD4-211ENST00000449159 TMEM60Q9H2L4 133 aa12.03□□□□□ -0.48
SMPD4-211ENST00000449159 STARD7Q9NQZ5 370 aa12.03□□□□□ -0.48
SMPD4-211ENST00000449159 POLR3EQ9NVU0 708 aa12.03□□□□□ -0.48
SMPD4-211ENST00000449159 PCDHB6Q9Y5E3 794 aa12.03□□□□□ -0.48
SMPD4-211ENST00000449159 GRIN2DO15399 1336 aa12.03□□□□□ -0.48
SMPD4-211ENST00000449159 CDH23Q9H251 3354 aa12.02□□□□□ -0.48
SMPD4-211ENST00000449159 CHMP2AO43633 222 aa12.02□□□□□ -0.49
SMPD4-211ENST00000449159 ZEB2O60315 1214 aa12.02□□□□□ -0.49
SMPD4-211ENST00000449159 GAS7O60861 476 aa12.02□□□□□ -0.49
SMPD4-211ENST00000449159 PPFIA4O75335 1185 aa12.02□□□□□ -0.49
SMPD4-211ENST00000449159 PSMD10O75832 226 aa12.02□□□□□ -0.49
SMPD4-211ENST00000449159 UTP14CQ5TAP6 766 aaKnown RBP12.02□□□□□ -0.49
SMPD4-211ENST00000449159 FOXD4L5Q5VV16 416 aaPredicted RBP12.02□□□□□ -0.49
SMPD4-211ENST00000449159 FAM173BQ6P4H8 233 aa12.02□□□□□ -0.49
SMPD4-211ENST00000449159 SLC39A5Q6ZMH5 540 aa12.02□□□□□ -0.49
SMPD4-211ENST00000449159 FOXD4L4Q8WXT5 416 aaPredicted RBP12.02□□□□□ -0.49
SMPD4-211ENST00000449159 NAP1L4Q99733 375 aaKnown RBP12.02□□□□□ -0.49
SMPD4-211ENST00000449159 C16orf70Q9BSU1 422 aa12.02□□□□□ -0.49
SMPD4-211ENST00000449159 MTG1Q9BT17 334 aaPredicted RBP12.02□□□□□ -0.49
SMPD4-211ENST00000449159 UBE2OQ9C0C9 1292 aaKnown RBP12.02□□□□□ -0.49
SMPD4-211ENST00000449159 UNC45AQ9H3U1 944 aa12.02□□□□□ -0.49
SMPD4-211ENST00000449159 TBC1D22BQ9NU19 505 aa12.02□□□□□ -0.49
SMPD4-211ENST00000449159 VAV3Q9UKW4 847 aa12.02□□□□□ -0.49
SMPD4-211ENST00000449159 NOL7Q9UMY1 257 aaKnown RBP12.02□□□□□ -0.49
SMPD4-211ENST00000449159 ELP1O95163 1332 aa12.02□□□□□ -0.49
SMPD4-211ENST00000449159 KPNA6O60684 536 aa12.01□□□□□ -0.49
SMPD4-211ENST00000449159 F2P00734 622 aa12.01□□□□□ -0.49
SMPD4-211ENST00000449159 TRAPPC10P48553 1259 aa12.01□□□□□ -0.49
SMPD4-211ENST00000449159 SNX17Q15036 470 aa12.01□□□□□ -0.49
SMPD4-211ENST00000449159 CALCRLQ16602 461 aa12.01□□□□□ -0.49
SMPD4-211ENST00000449159 ZNF746Q6NUN9 644 aaPredicted RBP12.01□□□□□ -0.49
SMPD4-211ENST00000449159 B3GNT9Q6UX72 402 aa12.01□□□□□ -0.49
SMPD4-211ENST00000449159 BRAPQ7Z569 592 aa12.01□□□□□ -0.49
SMPD4-211ENST00000449159 CCDC60Q8IWA6 550 aaPredicted RBP12.01□□□□□ -0.49
SMPD4-211ENST00000449159 SEPT1Q8WYJ6 367 aa12.01□□□□□ -0.49
SMPD4-211ENST00000449159 VTI1AQ96AJ9 217 aa12.01□□□□□ -0.49
SMPD4-211ENST00000449159 MTMR9Q96QG7 549 aa12.01□□□□□ -0.49
SMPD4-211ENST00000449159 PCYT2Q99447 389 aa12.01□□□□□ -0.49
SMPD4-211ENST00000449159 RIT2Q99578 217 aa12.01□□□□□ -0.49
SMPD4-211ENST00000449159 TEKT3Q9BXF9 490 aa12.01□□□□□ -0.49
SMPD4-211ENST00000449159 STXBP5LQ9Y2K9 1186 aa12.01□□□□□ -0.49
SMPD4-211ENST00000449159 VCANP13611 3396 aa12.01□□□□□ -0.49
SMPD4-211ENST00000449159 A0A0U1RQG5 324 aaPredicted RBP12□□□□□ -0.49
SMPD4-211ENST00000449159 HAS3O00219 553 aa12□□□□□ -0.49
SMPD4-211ENST00000449159 EML1O00423 815 aa12□□□□□ -0.49
SMPD4-211ENST00000449159 TBX3O15119 743 aa12□□□□□ -0.49
SMPD4-211ENST00000449159 CABYRO75952 493 aa12□□□□□ -0.49
SMPD4-211ENST00000449159 ATG7O95352 703 aa12□□□□□ -0.49
SMPD4-211ENST00000449159 SUPT20HL2P0C7V6 817 aa12□□□□□ -0.49
SMPD4-211ENST00000449159 PSEN2P49810 448 aa12□□□□□ -0.49
SMPD4-211ENST00000449159 RTP1P59025 263 aa12□□□□□ -0.49
SMPD4-211ENST00000449159 KRT76Q01546 638 aa12□□□□□ -0.49
SMPD4-211ENST00000449159 SPIRE1Q08AE8 756 aa12□□□□□ -0.49
SMPD4-211ENST00000449159 ITGA7Q13683 1181 aa12□□□□□ -0.49
SMPD4-211ENST00000449159 MFSD10Q14728 455 aa12□□□□□ -0.49
SMPD4-211ENST00000449159 KIAA0753Q2KHM9 967 aa12□□□□□ -0.49
SMPD4-211ENST00000449159 NBPF20Q3BBV1 942 aa12□□□□□ -0.49
SMPD4-211ENST00000449159 TRIM60Q495X7 471 aa12□□□□□ -0.49
SMPD4-211ENST00000449159 RILPL1Q5EBL4 403 aa12□□□□□ -0.49
SMPD4-211ENST00000449159 ABHD15Q6UXT9 468 aa12□□□□□ -0.49
SMPD4-211ENST00000449159 Q7L0L9 218 aa12□□□□□ -0.49
SMPD4-211ENST00000449159 C4orf32Q8N8J7 132 aa12□□□□□ -0.49
SMPD4-211ENST00000449159 FAM20AQ96MK3 541 aa12□□□□□ -0.49
SMPD4-211ENST00000449159 FTOQ9C0B1 505 aaKnown RBP eCLIP12□□□□□ -0.49
SMPD4-211ENST00000449159 EIF4ENIF1Q9NRA8 985 aaKnown RBP12□□□□□ -0.49
SMPD4-211ENST00000449159 TSHZ2Q9NRE2 1034 aa12□□□□□ -0.49
SMPD4-211ENST00000449159 ATP11BQ9Y2G3 1177 aa12□□□□□ -0.49
SMPD4-211ENST00000449159 EMSYQ7Z589 1322 aa12□□□□□ -0.49
SMPD4-211ENST00000449159 TCHHQ07283 1943 aa11.99□□□□□ -0.49
SMPD4-211ENST00000449159 IGKV6D-21A0A0A0MT36 114 aa11.99□□□□□ -0.49
SMPD4-211ENST00000449159 WDR64B1ANS9 1081 aa11.99□□□□□ -0.49
SMPD4-211ENST00000449159 H3BRB1 525 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms