RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 APOBEC3HQ6NTF7 200 aaKnown RBP6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 CTR9Q6PD62 1173 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 ATG9AQ7Z3C6 839 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 NOX5Q96PH1 765 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 TSPYL1Q9H0U9 437 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 RMND1Q9NWS8 449 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 XRN1Q8IZH2 1706 aaKnown RBP6.21□□□□□ -1.41
CDC42BPA-209ENST00000448940 PHLPP2Q6ZVD8 1323 aa6.21□□□□□ -1.41
CDC42BPA-209ENST00000448940 A0A0D9SFI3 127 aa6.21□□□□□ -1.41
CDC42BPA-209ENST00000448940 CARNS1A5YM72 827 aa6.21□□□□□ -1.41
CDC42BPA-209ENST00000448940 TBKBP1A7MCY6 615 aa6.21□□□□□ -1.41
CDC42BPA-209ENST00000448940 YDJCA8MPS7 323 aa6.21□□□□□ -1.41
CDC42BPA-209ENST00000448940 SLC27A2O14975 620 aa6.21□□□□□ -1.41
CDC42BPA-209ENST00000448940 SGSM2O43147 1006 aa6.21□□□□□ -1.41
CDC42BPA-209ENST00000448940 ZW10O43264 779 aa6.21□□□□□ -1.41
CDC42BPA-209ENST00000448940 USO1O60763 962 aaKnown RBP6.21□□□□□ -1.41
CDC42BPA-209ENST00000448940 EN2P19622 333 aaPredicted RBP6.21□□□□□ -1.41
CDC42BPA-209ENST00000448940 E2F5Q15329 346 aa6.21□□□□□ -1.41
CDC42BPA-209ENST00000448940 VTA1Q9NP79 307 aa6.21□□□□□ -1.41
CDC42BPA-209ENST00000448940 SCUBE2Q9NQ36 999 aa6.21□□□□□ -1.41
CDC42BPA-209ENST00000448940 VPS54Q9P1Q0 977 aa6.21□□□□□ -1.41
CDC42BPA-209ENST00000448940 PRR12Q9ULL5 1215 aa6.21□□□□□ -1.41
CDC42BPA-209ENST00000448940 TMEM191BP0C7N4 346 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 ACRP10323 421 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 CAPN2P17655 700 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 PRKCZQ05513 592 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 TLK2Q86UE8 772 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 C1QTNF1Q9BXJ1 281 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 SUDS3Q9H7L9 328 aaPredicted RBP6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 FRMD4BQ9Y2L6 1034 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 SYNCRIPO60506 623 aaKnown RBP6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 ZC3H11AO75152 810 aaKnown RBP eCLIP6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 XYLBO75191 536 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 EIF3JO75822 258 aaKnown RBP6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 LACTBP83111 547 aaPredicted RBP6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 TSPY1Q01534 308 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 FSCN1Q16658 493 aaKnown RBP6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 NECAB1Q8N987 351 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 OTUD7AQ8TE49 926 aaPredicted RBP6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 SMARCE1Q969G3 411 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 PBXIP1Q96AQ6 731 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 SNX25Q9H3E2 840 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 ERAP1Q9NZ08 941 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 TMX2Q9Y320 296 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 RWDD3Q9Y3V2 267 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 GON4LQ3T8J9 2241 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 KIF3CO14782 793 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 PGK1P00558 417 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 ALADP13716 330 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 TMEM62Q0P6H9 643 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 HERC4Q5GLZ8 1057 aaPredicted RBP6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 UHRF1Q96T88 793 aaPredicted RBP6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 WDR18Q9BV38 432 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 FBXO28Q9NVF7 368 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 KDM3AQ9Y4C1 1321 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 SKIP12755 728 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 RTP1P59025 263 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 ELOAQ14241 798 aaKnown RBP6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 IQSEC1Q6DN90 963 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 CACNA2D4Q7Z3S7 1137 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 TXLNBQ8N3L3 684 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 AFG1LQ8WV93 481 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 CCDC114Q96M63 670 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 ZCCHC17Q9NP64 241 aaKnown RBP6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 SAGE1Q9NXZ1 904 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 ANKFY1Q9P2R3 1169 aa6.21□□□□□ -1.42
CDC42BPA-209ENST00000448940 CYBBP04839 570 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 SFNP31947 248 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 ACVR2BQ13705 512 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 SBK1Q52WX2 424 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 SGO2Q562F6 1265 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 TTC38Q5R3I4 469 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 XRRA1Q6P2D8 792 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 FSIP1Q8NA03 581 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 MOV10L1Q9BXT6 1211 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 K7ELQ4 463 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 USP2O75604 605 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 GAS8O95995 478 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 CCDC172P0C7W6 258 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 MTIF2P46199 727 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 IFNAR2P48551 515 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 SND1Q7KZF4 910 aaKnown RBP eCLIP6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 PRIMPOLQ96LW4 560 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 ZSCAN16Q9H4T2 348 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 PXDNLA1KZ92 1463 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 CLTBP09497 229 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 NFKBIAP25963 317 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 ABCD1P33897 745 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 C16orf86Q6ZW13 317 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 ARMCX2Q7L311 632 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 RNF139Q8WU17 664 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 ZNF512BQ96KM6 892 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 NCAPGQ9BPX3 1015 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 COLEC11Q9BWP8 271 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 GGT7Q9UJ14 662 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 NDRG2Q9UN36 371 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 TTLL3Q9Y4R7 772 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 SALL1Q9NSC2 1324 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 LAMTOR5O43504 91 aa6.2□□□□□ -1.42
CDC42BPA-209ENST00000448940 MYL7Q01449 175 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms