RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 PHOX2BQ99453 314 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 RIT2Q99578 217 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 MXRA8Q9BRK3 442 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 ZNF577Q9BSK1 485 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 TEKT3Q9BXF9 490 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 HOXC10Q9NYD6 342 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 ADD3Q9UEY8 706 aaKnown RBP11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 ADAMTS5Q9UNA0 930 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 MAPK8IP1Q9UQF2 711 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 AFG3L2Q9Y4W6 797 aa11.77□□□□□ -0.53
VIPAS39-203ENST00000448935 FRMPD4Q14CM0 1322 aa11.76□□□□□ -0.53
VIPAS39-203ENST00000448935 ITIH6Q6UXX5 1313 aa11.76□□□□□ -0.53
VIPAS39-203ENST00000448935 NFIBO00712 420 aa11.76□□□□□ -0.53
VIPAS39-203ENST00000448935 ATP2A1O14983 1001 aa11.76□□□□□ -0.53
VIPAS39-203ENST00000448935 MED24O75448 989 aa11.76□□□□□ -0.53
VIPAS39-203ENST00000448935 PSMD10O75832 226 aa11.76□□□□□ -0.53
VIPAS39-203ENST00000448935 SSBP05455 408 aaKnown RBP eCLIP11.76□□□□□ -0.53
VIPAS39-203ENST00000448935 STAT3P40763 770 aa11.76□□□□□ -0.53
VIPAS39-203ENST00000448935 STK4Q13043 487 aa11.76□□□□□ -0.53
VIPAS39-203ENST00000448935 ECM1Q16610 540 aa11.76□□□□□ -0.53
VIPAS39-203ENST00000448935 DNTTIP2Q5QJE6 756 aaKnown RBP11.76□□□□□ -0.53
VIPAS39-203ENST00000448935 ASTLQ6HA08 431 aaPredicted RBP11.76□□□□□ -0.53
VIPAS39-203ENST00000448935 CATSPERGQ6ZRH7 1159 aa11.76□□□□□ -0.53
VIPAS39-203ENST00000448935 OTOP1Q7RTM1 612 aa11.76□□□□□ -0.53
VIPAS39-203ENST00000448935 KCNK18Q7Z418 384 aa11.76□□□□□ -0.53
VIPAS39-203ENST00000448935 CATSPER3Q86XQ3 398 aa11.76□□□□□ -0.53
VIPAS39-203ENST00000448935 SYT2Q8N9I0 419 aaPredicted RBP11.76□□□□□ -0.53
VIPAS39-203ENST00000448935 GJA10Q969M2 543 aa11.76□□□□□ -0.53
VIPAS39-203ENST00000448935 TRERF1Q96PN7 1200 aa11.76□□□□□ -0.53
VIPAS39-203ENST00000448935 TSG101Q99816 390 aa11.76□□□□□ -0.53
VIPAS39-203ENST00000448935 BEGAINQ9BUH8 593 aa11.76□□□□□ -0.53
VIPAS39-203ENST00000448935 PANK4Q9NVE7 773 aa11.76□□□□□ -0.53
VIPAS39-203ENST00000448935 COL11A1P12107 1806 aaPredicted RBP11.76□□□□□ -0.53
VIPAS39-203ENST00000448935 WDR90Q96KV7 1748 aa11.76□□□□□ -0.53
VIPAS39-203ENST00000448935 RLFQ13129 1914 aa11.76□□□□□ -0.53
VIPAS39-203ENST00000448935 E9PMD0 336 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 N4BP3O15049 544 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 CCP110O43303 1012 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 KRT18P05783 430 aaKnown RBP11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 CCZ1BP86790 482 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 CCZ1P86791 482 aaPredicted RBP11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 LRRC63Q05C16 580 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 EHHADHQ08426 723 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 TRIM14Q14142 442 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 KRT31Q15323 416 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 CENPPQ6IPU0 288 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 TTI2Q6NXR4 508 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 RNF207Q6ZRF8 634 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 APTXQ7Z2E3 356 aaKnown RBP11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 GPBP1Q86WP2 473 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 CSGALNACT2Q8N6G5 542 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 CYP2W1Q8TAV3 490 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 SYTL5Q8TDW5 730 aaPredicted RBP11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 DNAJC19Q96DA6 116 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 ATG4CQ96DT6 458 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 EPAS1Q99814 870 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 EIF2AK1Q9BQI3 630 aaKnown RBP11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 INTS13Q9NVM9 706 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 POTEFA5A3E0 1075 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 IPO5O00410 1097 aaKnown RBP11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 EYA4O95677 639 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 POTEIP0CG38 1075 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 SPATA31C1P0DKV0 1188 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 FCER1AP12319 257 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 YBX3P16989 372 aaKnown RBP eCLIP11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 CYP11B2P19099 503 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 COPB1P53618 953 aaKnown RBP11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 SLC12A3P55017 1021 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 COASYQ13057 564 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 TBX2Q13207 712 aaPredicted RBP11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 EPHA7Q15375 998 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 MUM1L1Q5H9M0 696 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 FAM26FQ5R3K3 315 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 ARMCX5Q6P1M9 558 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 POTEGQ6S5H5 508 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 POTEEQ6S8J3 1075 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 PPFIBP1Q86W92 1011 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 MYOCDQ8IZQ8 938 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 KIAA0895Q8NCT3 520 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 SRRTQ9BXP5 876 aaKnown RBP11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 SLC39A2Q9NP94 309 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 KCND1Q9NSA2 647 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 RNF146Q9NTX7 359 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 TCEAL9Q9UHQ7 104 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 UBIAD1Q9Y5Z9 338 aa11.75□□□□□ -0.53
VIPAS39-203ENST00000448935 SCN4AP35499 1836 aa11.74□□□□□ -0.53
VIPAS39-203ENST00000448935 PAPPA2Q9BXP8 1791 aa11.74□□□□□ -0.53
VIPAS39-203ENST00000448935 TRIM49BA6NDI0 452 aa11.74□□□□□ -0.53
VIPAS39-203ENST00000448935 RPS6P62753 249 aaKnown RBP11.74□□□□□ -0.53
VIPAS39-203ENST00000448935 UBXN2AP68543 259 aa11.74□□□□□ -0.53
VIPAS39-203ENST00000448935 DGKZQ13574 1117 aa11.74□□□□□ -0.53
VIPAS39-203ENST00000448935 VGLL4Q14135 290 aa11.74□□□□□ -0.53
VIPAS39-203ENST00000448935 SNRNP48Q6IEG0 339 aaKnown RBP11.74□□□□□ -0.53
VIPAS39-203ENST00000448935 REPS2Q8NFH8 660 aa11.74□□□□□ -0.53
VIPAS39-203ENST00000448935 HSD17B14Q9BPX1 270 aa11.74□□□□□ -0.53
VIPAS39-203ENST00000448935 TEX13BQ9BXU2 312 aa11.74□□□□□ -0.53
VIPAS39-203ENST00000448935 JADE2Q9NQC1 790 aa11.74□□□□□ -0.53
VIPAS39-203ENST00000448935 HOMER2Q9NSB8 354 aa11.74□□□□□ -0.53
VIPAS39-203ENST00000448935 TBC1D22BQ9NU19 505 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms