RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 PRO3102Q9H379 93 aa15.88■□□□□ 0.13
GTF3C3-206ENST00000448539 AZI2Q9H6S1 392 aa15.88■□□□□ 0.13
GTF3C3-206ENST00000448539 H3BRB1 525 aa15.87■□□□□ 0.13
GTF3C3-206ENST00000448539 MSH4O15457 936 aa15.87■□□□□ 0.13
GTF3C3-206ENST00000448539 EDIL3O43854 480 aa15.87■□□□□ 0.13
GTF3C3-206ENST00000448539 GAS7O60861 476 aa15.87■□□□□ 0.13
GTF3C3-206ENST00000448539 SUPT20HL2P0C7V6 817 aa15.87■□□□□ 0.13
GTF3C3-206ENST00000448539 SYN1P17600 705 aa15.87■□□□□ 0.13
GTF3C3-206ENST00000448539 ACTR2P61160 394 aa15.87■□□□□ 0.13
GTF3C3-206ENST00000448539 PTPN11Q06124 597 aaPredicted RBP15.87■□□□□ 0.13
GTF3C3-206ENST00000448539 EARS2Q5JPH6 523 aaKnown RBP15.87■□□□□ 0.13
GTF3C3-206ENST00000448539 LARP1BQ659C4 914 aaKnown RBP15.87■□□□□ 0.13
GTF3C3-206ENST00000448539 MCTP1Q6DN14 999 aa15.87■□□□□ 0.13
GTF3C3-206ENST00000448539 PPP4R3AQ6IN85 833 aa15.87■□□□□ 0.13
GTF3C3-206ENST00000448539 KAT2BQ92831 832 aa15.87■□□□□ 0.13
GTF3C3-206ENST00000448539 GLG1Q92896 1179 aa15.87■□□□□ 0.13
GTF3C3-206ENST00000448539 LENG9Q96B70 501 aa15.87■□□□□ 0.13
GTF3C3-206ENST00000448539 TEKT3Q9BXF9 490 aa15.87■□□□□ 0.13
GTF3C3-206ENST00000448539 TUT1Q9H6E5 874 aaKnown RBP15.87■□□□□ 0.13
GTF3C3-206ENST00000448539 TMEM39AQ9NV64 488 aa15.87■□□□□ 0.13
GTF3C3-206ENST00000448539 NOD1Q9Y239 953 aa15.87■□□□□ 0.13
GTF3C3-206ENST00000448539 MYH7BA7E2Y1 1941 aa15.87■□□□□ 0.13
GTF3C3-206ENST00000448539 GRIN2DO15399 1336 aa15.87■□□□□ 0.13
GTF3C3-206ENST00000448539 GSTTP1A0A1W2PQM5 241 aa15.86■□□□□ 0.13
GTF3C3-206ENST00000448539 FAM205CA6NFA0 338 aa15.86■□□□□ 0.13
GTF3C3-206ENST00000448539 BAG4O95429 457 aaKnown RBP15.86■□□□□ 0.13
GTF3C3-206ENST00000448539 HSP90AA1P07900 732 aaKnown RBP15.86■□□□□ 0.13
GTF3C3-206ENST00000448539 ATP2B1P20020 1258 aa15.86■□□□□ 0.13
GTF3C3-206ENST00000448539 KRT76Q01546 638 aa15.86■□□□□ 0.13
GTF3C3-206ENST00000448539 LRCH2Q5VUJ6 765 aa15.86■□□□□ 0.13
GTF3C3-206ENST00000448539 MIS18BP1Q6P0N0 1132 aa15.86■□□□□ 0.13
GTF3C3-206ENST00000448539 FAM126BQ8IXS8 530 aa15.86■□□□□ 0.13
GTF3C3-206ENST00000448539 INTS4Q96HW7 963 aaKnown RBP15.86■□□□□ 0.13
GTF3C3-206ENST00000448539 MBOAT7Q96N66 472 aa15.86■□□□□ 0.13
GTF3C3-206ENST00000448539 RIT2Q99578 217 aa15.86■□□□□ 0.13
GTF3C3-206ENST00000448539 C16orf70Q9BSU1 422 aa15.86■□□□□ 0.13
GTF3C3-206ENST00000448539 SMARCAD1Q9H4L7 1026 aa15.86■□□□□ 0.13
GTF3C3-206ENST00000448539 NOL7Q9UMY1 257 aaKnown RBP15.86■□□□□ 0.13
GTF3C3-206ENST00000448539 SAMM50Q9Y512 469 aa15.86■□□□□ 0.13
GTF3C3-206ENST00000448539 BACH1O14867 736 aa15.85■□□□□ 0.13
GTF3C3-206ENST00000448539 DHX15O43143 795 aaKnown RBP15.85■□□□□ 0.13
GTF3C3-206ENST00000448539 SLC37A4O43826 429 aa15.85■□□□□ 0.13
GTF3C3-206ENST00000448539 PDCP20941 246 aa15.85■□□□□ 0.13
GTF3C3-206ENST00000448539 FAAP100Q0VG06 881 aa15.85■□□□□ 0.13
GTF3C3-206ENST00000448539 FAM160B1Q5W0V3 765 aa15.85■□□□□ 0.13
GTF3C3-206ENST00000448539 ZNF746Q6NUN9 644 aaPredicted RBP15.85■□□□□ 0.13
GTF3C3-206ENST00000448539 TRIM50Q86XT4 487 aa15.85■□□□□ 0.13
GTF3C3-206ENST00000448539 NOSTRINQ8IVI9 506 aa15.85■□□□□ 0.13
GTF3C3-206ENST00000448539 SMAP1Q8IYB5 467 aaPredicted RBP15.85■□□□□ 0.13
GTF3C3-206ENST00000448539 PPP1R13LQ8WUF5 828 aa15.85■□□□□ 0.13
GTF3C3-206ENST00000448539 SLC5A5Q92911 643 aa15.85■□□□□ 0.13
GTF3C3-206ENST00000448539 FAM20AQ96MK3 541 aa15.85■□□□□ 0.13
GTF3C3-206ENST00000448539 LBHD1Q9BQE6 289 aaPredicted RBP15.85■□□□□ 0.13
GTF3C3-206ENST00000448539 PDLIM7Q9NR12 457 aa15.85■□□□□ 0.13
GTF3C3-206ENST00000448539 ERAP1Q9NZ08 941 aa15.85■□□□□ 0.13
GTF3C3-206ENST00000448539 TELO2Q9Y4R8 837 aa15.85■□□□□ 0.13
GTF3C3-206ENST00000448539 HAS3O00219 553 aa15.84■□□□□ 0.13
GTF3C3-206ENST00000448539 PSAPP07602 524 aa15.84■□□□□ 0.13
GTF3C3-206ENST00000448539 RAG1P15918 1043 aa15.84■□□□□ 0.13
GTF3C3-206ENST00000448539 STAT5BP51692 787 aa15.84■□□□□ 0.13
GTF3C3-206ENST00000448539 SESTD1Q86VW0 696 aa15.84■□□□□ 0.13
GTF3C3-206ENST00000448539 TNPO1Q92973 898 aaKnown RBP15.84■□□□□ 0.13
GTF3C3-206ENST00000448539 TRPV6Q9H1D0 765 aa15.84■□□□□ 0.13
GTF3C3-206ENST00000448539 FOXD4L1Q9NU39 408 aa15.84■□□□□ 0.13
GTF3C3-206ENST00000448539 TRMT13Q9NUP7 481 aaKnown RBP15.84■□□□□ 0.13
GTF3C3-206ENST00000448539 HDAC6Q9UBN7 1215 aa15.84■□□□□ 0.13
GTF3C3-206ENST00000448539 WDR64B1ANS9 1081 aa15.83■□□□□ 0.12
GTF3C3-206ENST00000448539 TBX3O15119 743 aa15.83■□□□□ 0.12
GTF3C3-206ENST00000448539 CHMP2AO43633 222 aa15.83■□□□□ 0.12
GTF3C3-206ENST00000448539 B4GALT4O60513 344 aa15.83■□□□□ 0.12
GTF3C3-206ENST00000448539 LGR5O75473 907 aa15.83■□□□□ 0.12
GTF3C3-206ENST00000448539 ATG7O95352 703 aa15.83■□□□□ 0.12
GTF3C3-206ENST00000448539 CCNE2O96020 404 aa15.83■□□□□ 0.12
GTF3C3-206ENST00000448539 CD4P01730 458 aa15.83■□□□□ 0.12
GTF3C3-206ENST00000448539 GNAT1P11488 350 aa15.83■□□□□ 0.12
GTF3C3-206ENST00000448539 U2AF2P26368 475 aaKnown RBP eCLIP15.83■□□□□ 0.129e-7■■■■□ 23.5
GTF3C3-206ENST00000448539 MARK3P27448 753 aa15.83■□□□□ 0.12
GTF3C3-206ENST00000448539 SFNP31947 248 aa15.83■□□□□ 0.12
GTF3C3-206ENST00000448539 JAK3P52333 1124 aa15.83■□□□□ 0.12
GTF3C3-206ENST00000448539 PTGISQ16647 500 aa15.83■□□□□ 0.12
GTF3C3-206ENST00000448539 SH3RF1Q7Z6J0 888 aa15.83■□□□□ 0.12
GTF3C3-206ENST00000448539 SLFN12Q8IYM2 578 aa15.83■□□□□ 0.12
GTF3C3-206ENST00000448539 ETNPPLQ8TBG4 499 aa15.83■□□□□ 0.12
GTF3C3-206ENST00000448539 GTF2IRD1Q9UHL9 959 aa15.83■□□□□ 0.12
GTF3C3-206ENST00000448539 PCDHA10Q9Y5I2 948 aa15.83■□□□□ 0.12
GTF3C3-206ENST00000448539 EMSYQ7Z589 1322 aa15.83■□□□□ 0.12
GTF3C3-206ENST00000448539 TRIOBPQ9H2D6 2365 aa15.83■□□□□ 0.12
GTF3C3-206ENST00000448539 SCN10AQ9Y5Y9 1956 aa15.82■□□□□ 0.12
GTF3C3-206ENST00000448539 DNAH12Q6ZR08 3092 aa15.82■□□□□ 0.12
GTF3C3-206ENST00000448539 C17orf102A2RUQ5 167 aa15.82■□□□□ 0.12
GTF3C3-206ENST00000448539 TRIM43BA6NCK2 446 aa15.82■□□□□ 0.12
GTF3C3-206ENST00000448539 KIF28PB7ZC32 967 aa15.82■□□□□ 0.12
GTF3C3-206ENST00000448539 KIAA0355O15063 1070 aa15.82■□□□□ 0.12
GTF3C3-206ENST00000448539 NEMFO60524 1076 aa15.82■□□□□ 0.12
GTF3C3-206ENST00000448539 SMIM10L2AP0DMW4 78 aa15.82■□□□□ 0.12
GTF3C3-206ENST00000448539 SMIM10L2BP0DMW5 78 aa15.82■□□□□ 0.12
GTF3C3-206ENST00000448539 MCM7P33993 719 aa15.82■□□□□ 0.12
GTF3C3-206ENST00000448539 TRAPPC10P48553 1259 aa15.82■□□□□ 0.12
GTF3C3-206ENST00000448539 CALCRLQ16602 461 aa15.82■□□□□ 0.12
GTF3C3-206ENST00000448539 GDF6Q6KF10 455 aaPredicted RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms