RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 METTL13Q8N6R0 699 aa12.37□□□□□ -0.43
PTCH2-203ENST00000447098 ABCB11O95342 1321 aa12.37□□□□□ -0.43
PTCH2-203ENST00000447098 SPDYE2BA6NHP3 402 aa12.37□□□□□ -0.43
PTCH2-203ENST00000447098 A6NNZ2 444 aa12.37□□□□□ -0.43
PTCH2-203ENST00000447098 ABL1P00519 1130 aa12.37□□□□□ -0.43
PTCH2-203ENST00000447098 SPDYE6P0CI01 402 aa12.37□□□□□ -0.43
PTCH2-203ENST00000447098 CUL4BQ13620 913 aa12.37□□□□□ -0.43
PTCH2-203ENST00000447098 SEC23AQ15436 765 aa12.37□□□□□ -0.43
PTCH2-203ENST00000447098 TUBB8Q3ZCM7 444 aa12.37□□□□□ -0.43
PTCH2-203ENST00000447098 TCP11X2Q5H9J9 407 aa12.37□□□□□ -0.43
PTCH2-203ENST00000447098 APOBEC3HQ6NTF7 200 aaKnown RBP12.37□□□□□ -0.43
PTCH2-203ENST00000447098 CABS1Q96KC9 395 aa12.37□□□□□ -0.43
PTCH2-203ENST00000447098 CCDC114Q96M63 670 aa12.37□□□□□ -0.43
PTCH2-203ENST00000447098 BHMT2Q9H2M3 363 aa12.37□□□□□ -0.43
PTCH2-203ENST00000447098 TFR2Q9UP52 801 aa12.37□□□□□ -0.43
PTCH2-203ENST00000447098 RABGAP1Q9Y3P9 1069 aa12.37□□□□□ -0.43
PTCH2-203ENST00000447098 ENTPD3O75355 529 aa12.37□□□□□ -0.43
PTCH2-203ENST00000447098 CD44P16070 742 aaKnown RBP12.37□□□□□ -0.43
PTCH2-203ENST00000447098 RPL13P26373 211 aaKnown RBP12.37□□□□□ -0.43
PTCH2-203ENST00000447098 MDM2Q00987 491 aaPredicted RBP12.37□□□□□ -0.43
PTCH2-203ENST00000447098 SLC7A5Q01650 507 aa12.37□□□□□ -0.43
PTCH2-203ENST00000447098 PDCLQ13371 301 aa12.37□□□□□ -0.43
PTCH2-203ENST00000447098 GRIPAP1Q4V328 841 aa12.37□□□□□ -0.43
PTCH2-203ENST00000447098 MYOCDQ8IZQ8 938 aa12.37□□□□□ -0.43
PTCH2-203ENST00000447098 RMDN3Q96TC7 470 aa12.37□□□□□ -0.43
PTCH2-203ENST00000447098 RPAP3Q9H6T3 665 aaPredicted RBP12.37□□□□□ -0.43
PTCH2-203ENST00000447098 IL17RBQ9NRM6 502 aa12.37□□□□□ -0.43
PTCH2-203ENST00000447098 FRMD4BQ9Y2L6 1034 aa12.37□□□□□ -0.43
PTCH2-203ENST00000447098 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.37□□□□□ -0.43
PTCH2-203ENST00000447098 KCPQ6ZWJ8 1503 aa12.36□□□□□ -0.43
PTCH2-203ENST00000447098 CCDC172P0C7W6 258 aa12.36□□□□□ -0.43
PTCH2-203ENST00000447098 HPDP32754 393 aaPredicted RBP12.36□□□□□ -0.43
PTCH2-203ENST00000447098 SMTNP53814 917 aa12.36□□□□□ -0.43
PTCH2-203ENST00000447098 CYP27A1Q02318 531 aa12.36□□□□□ -0.43
PTCH2-203ENST00000447098 CRY2Q49AN0 593 aa12.36□□□□□ -0.43
PTCH2-203ENST00000447098 CCDC121Q6ZUS5 278 aa12.36□□□□□ -0.43
PTCH2-203ENST00000447098 ARMC9Q7Z3E5 817 aa12.36□□□□□ -0.43
PTCH2-203ENST00000447098 FAM160B2Q86V87 743 aa12.36□□□□□ -0.43
PTCH2-203ENST00000447098 FAM178BQ8IXR5 827 aa12.36□□□□□ -0.43
PTCH2-203ENST00000447098 TSGA10Q9BZW7 698 aa12.36□□□□□ -0.43
PTCH2-203ENST00000447098 RNF146Q9NTX7 359 aa12.36□□□□□ -0.43
PTCH2-203ENST00000447098 TTC26A0AVF1 554 aa12.36□□□□□ -0.43
PTCH2-203ENST00000447098 ZNF185O15231 689 aa12.36□□□□□ -0.43
PTCH2-203ENST00000447098 RNF207Q6ZRF8 634 aa12.36□□□□□ -0.43
PTCH2-203ENST00000447098 ELOA2Q8IYF1 753 aaPredicted RBP12.36□□□□□ -0.43
PTCH2-203ENST00000447098 MSL3Q8N5Y2 521 aaKnown RBP12.36□□□□□ -0.43
PTCH2-203ENST00000447098 RGPD1P0DJD0 1748 aa12.36□□□□□ -0.43
PTCH2-203ENST00000447098 KDM3AQ9Y4C1 1321 aa12.36□□□□□ -0.43
PTCH2-203ENST00000447098 EPB41P11171 864 aaKnown RBP12.36□□□□□ -0.43
PTCH2-203ENST00000447098 VEGFAP15692 232 aaPredicted RBP12.36□□□□□ -0.43
PTCH2-203ENST00000447098 ODR4Q5SWX8 454 aa12.36□□□□□ -0.43
PTCH2-203ENST00000447098 NBPF12Q5TAG4 269 aaPredicted RBP12.36□□□□□ -0.43
PTCH2-203ENST00000447098 LDHDQ86WU2 507 aa12.36□□□□□ -0.43
PTCH2-203ENST00000447098 IFT74Q96LB3 600 aa12.36□□□□□ -0.43
PTCH2-203ENST00000447098 PRR12Q9ULL5 1215 aa12.36□□□□□ -0.43
PTCH2-203ENST00000447098 FAM237AA0A1B0GTK4 181 aa12.35□□□□□ -0.43
PTCH2-203ENST00000447098 POTEB3A0JP26 581 aa12.35□□□□□ -0.43
PTCH2-203ENST00000447098 POTECB2RU33 542 aa12.35□□□□□ -0.43
PTCH2-203ENST00000447098 E9PMD0 336 aa12.35□□□□□ -0.43
PTCH2-203ENST00000447098 SARSP49591 514 aaKnown RBP12.35□□□□□ -0.43
PTCH2-203ENST00000447098 POTEBQ6S5H4 581 aa12.35□□□□□ -0.43
PTCH2-203ENST00000447098 DPP9Q86TI2 863 aa12.35□□□□□ -0.43
PTCH2-203ENST00000447098 PRPF38AQ8NAV1 312 aaKnown RBP12.35□□□□□ -0.43
PTCH2-203ENST00000447098 PHF20Q9BVI0 1012 aa12.35□□□□□ -0.43
PTCH2-203ENST00000447098 JMJD4Q9H9V9 463 aa12.35□□□□□ -0.43
PTCH2-203ENST00000447098 DISC1Q9NRI5 854 aa12.35□□□□□ -0.43
PTCH2-203ENST00000447098 RWDD2AQ9UIY3 292 aa12.35□□□□□ -0.43
PTCH2-203ENST00000447098 TRPC6Q9Y210 931 aa12.35□□□□□ -0.43
PTCH2-203ENST00000447098 PARP4Q9UKK3 1724 aaKnown RBP12.35□□□□□ -0.43
PTCH2-203ENST00000447098 TARSL2A2RTX5 802 aaKnown RBP12.35□□□□□ -0.43
PTCH2-203ENST00000447098 SYF2O95926 243 aaKnown RBP12.35□□□□□ -0.43
PTCH2-203ENST00000447098 CNGA1P29973 690 aa12.35□□□□□ -0.43
PTCH2-203ENST00000447098 TOB1P50616 345 aaPredicted RBP12.35□□□□□ -0.43
PTCH2-203ENST00000447098 RCAN1P53805 252 aa12.35□□□□□ -0.43
PTCH2-203ENST00000447098 FAM205AQ6ZU69 1335 aa12.35□□□□□ -0.43
PTCH2-203ENST00000447098 HNRNPH1P31943 449 aaKnown RBP12.35□□□□□ -0.43
PTCH2-203ENST00000447098 CCNI2Q6ZMN8 369 aaPredicted RBP12.35□□□□□ -0.43
PTCH2-203ENST00000447098 APOBEC3FQ8IUX4 373 aaKnown RBP12.35□□□□□ -0.43
PTCH2-203ENST00000447098 BANK1Q8NDB2 785 aa12.35□□□□□ -0.43
PTCH2-203ENST00000447098 TRIM58Q8NG06 486 aa12.35□□□□□ -0.43
PTCH2-203ENST00000447098 CCDC127Q96BQ5 260 aa12.35□□□□□ -0.43
PTCH2-203ENST00000447098 PPP1R16BQ96T49 567 aa12.35□□□□□ -0.43
PTCH2-203ENST00000447098 SPZ1Q9BXG8 430 aa12.35□□□□□ -0.43
PTCH2-203ENST00000447098 TMEM60Q9H2L4 133 aa12.35□□□□□ -0.43
PTCH2-203ENST00000447098 CXorf56Q9H5V9 222 aa12.35□□□□□ -0.43
PTCH2-203ENST00000447098 MAD2L2Q9UI95 211 aa12.35□□□□□ -0.43
PTCH2-203ENST00000447098 CXCR5P32302 372 aa12.34□□□□□ -0.43
PTCH2-203ENST00000447098 TRAPPC11Q7Z392 1133 aa12.34□□□□□ -0.43
PTCH2-203ENST00000447098 HPS3Q969F9 1004 aa12.34□□□□□ -0.43
PTCH2-203ENST00000447098 IFIH1Q9BYX4 1025 aaKnown RBP12.34□□□□□ -0.43
PTCH2-203ENST00000447098 ABT1Q9ULW3 272 aaKnown RBP12.34□□□□□ -0.43
PTCH2-203ENST00000447098 ITIH6Q6UXX5 1313 aa12.34□□□□□ -0.43
PTCH2-203ENST00000447098 POTEFA5A3E0 1075 aa12.34□□□□□ -0.43
PTCH2-203ENST00000447098 K7ENM7 598 aa12.34□□□□□ -0.43
PTCH2-203ENST00000447098 CLIC2O15247 247 aa12.34□□□□□ -0.43
PTCH2-203ENST00000447098 POTEIP0CG38 1075 aa12.34□□□□□ -0.43
PTCH2-203ENST00000447098 GCFC2P16383 781 aaKnown RBP12.34□□□□□ -0.43
PTCH2-203ENST00000447098 SHROOM1Q2M3G4 852 aaPredicted RBP12.34□□□□□ -0.43
PTCH2-203ENST00000447098 NT5DC1Q5TFE4 455 aa12.34□□□□□ -0.43
PTCH2-203ENST00000447098 C9orf131Q5VYM1 1079 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms