RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 USP53Q70EK8 1073 aa6.43□□□□□ -1.38
LINC00440-201ENST00000446579 PEX11GQ96HA9 241 aa6.43□□□□□ -1.38
LINC00440-201ENST00000446579 ARVCFO00192 962 aa6.42□□□□□ -1.38
LINC00440-201ENST00000446579 ZEB2O60315 1214 aa6.42□□□□□ -1.38
LINC00440-201ENST00000446579 KPNA6O60684 536 aa6.42□□□□□ -1.38
LINC00440-201ENST00000446579 CRTAMO95727 393 aa6.42□□□□□ -1.38
LINC00440-201ENST00000446579 PRR5P85299 388 aa6.42□□□□□ -1.38
LINC00440-201ENST00000446579 KCNAB2Q13303 367 aa6.42□□□□□ -1.38
LINC00440-201ENST00000446579 STAT4Q14765 748 aa6.42□□□□□ -1.38
LINC00440-201ENST00000446579 TARBP2Q15633 366 aaKnown RBP6.42□□□□□ -1.38
LINC00440-201ENST00000446579 CFAP100Q494V2 611 aa6.42□□□□□ -1.38
LINC00440-201ENST00000446579 LHFPL2Q6ZUX7 228 aa6.42□□□□□ -1.38
LINC00440-201ENST00000446579 UBE2R2Q712K3 238 aaPredicted RBP6.42□□□□□ -1.38
LINC00440-201ENST00000446579 FRMD5Q7Z6J6 570 aa6.42□□□□□ -1.38
LINC00440-201ENST00000446579 RAVER1Q8IY67 606 aaKnown RBP6.42□□□□□ -1.38
LINC00440-201ENST00000446579 TP53I13Q8NBR0 393 aaPredicted RBP6.42□□□□□ -1.38
LINC00440-201ENST00000446579 WDR66Q8TBY9 1149 aa6.42□□□□□ -1.38
LINC00440-201ENST00000446579 DIO2Q92813 273 aa6.42□□□□□ -1.38
LINC00440-201ENST00000446579 C8orf48Q96LL4 319 aa6.42□□□□□ -1.38
LINC00440-201ENST00000446579 PUS7LQ9H0K6 701 aaKnown RBP6.42□□□□□ -1.38
LINC00440-201ENST00000446579 GPR27Q9NS67 375 aa6.42□□□□□ -1.38
LINC00440-201ENST00000446579 SLC52A1Q9NWF4 448 aa6.42□□□□□ -1.38
LINC00440-201ENST00000446579 TCEAL9Q9UHQ7 104 aa6.42□□□□□ -1.38
LINC00440-201ENST00000446579 TRAF6Q9Y4K3 522 aa6.42□□□□□ -1.38
LINC00440-201ENST00000446579 IRS2Q9Y4H2 1338 aa6.42□□□□□ -1.38
LINC00440-201ENST00000446579 FFAR3O14843 346 aa6.41□□□□□ -1.38
LINC00440-201ENST00000446579 MEFVO15553 781 aaPredicted RBP6.41□□□□□ -1.38
LINC00440-201ENST00000446579 ZBTB7AO95365 584 aa6.41□□□□□ -1.38
LINC00440-201ENST00000446579 FUCA1P04066 466 aa6.41□□□□□ -1.38
LINC00440-201ENST00000446579 ADRB1P08588 477 aa6.41□□□□□ -1.38
LINC00440-201ENST00000446579 GTF2A2P52657 109 aa6.41□□□□□ -1.38
LINC00440-201ENST00000446579 GPR85P60893 370 aa6.41□□□□□ -1.38
LINC00440-201ENST00000446579 MCL1Q07820 350 aa6.41□□□□□ -1.38
LINC00440-201ENST00000446579 SLC9A5Q14940 896 aa6.41□□□□□ -1.38
LINC00440-201ENST00000446579 MBLAC2Q68D91 279 aa6.41□□□□□ -1.38
LINC00440-201ENST00000446579 GGNQ86UU5 652 aa6.41□□□□□ -1.38
LINC00440-201ENST00000446579 SPATS2Q86XZ4 545 aaKnown RBP6.41□□□□□ -1.38
LINC00440-201ENST00000446579 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.41□□□□□ -1.38
LINC00440-201ENST00000446579 TSPAN17Q96FV3 270 aa6.41□□□□□ -1.38
LINC00440-201ENST00000446579 IFT22Q9H7X7 185 aa6.41□□□□□ -1.38
LINC00440-201ENST00000446579 SLC5A4Q9NY91 659 aa6.41□□□□□ -1.38
LINC00440-201ENST00000446579 FBLN5Q9UBX5 448 aa6.41□□□□□ -1.38
LINC00440-201ENST00000446579 TIMM13Q9Y5L4 95 aaPredicted RBP6.41□□□□□ -1.38
LINC00440-201ENST00000446579 HCFC2Q9Y5Z7 792 aa6.41□□□□□ -1.38
LINC00440-201ENST00000446579 ARNTLO00327 626 aa6.4□□□□□ -1.38
LINC00440-201ENST00000446579 MYO1BO43795 1136 aa6.4□□□□□ -1.38
LINC00440-201ENST00000446579 KATNA1O75449 491 aa6.4□□□□□ -1.38
LINC00440-201ENST00000446579 SLURP1P55000 103 aa6.4□□□□□ -1.38
LINC00440-201ENST00000446579 RPL11P62913 178 aaKnown RBP6.4□□□□□ -1.38
LINC00440-201ENST00000446579 MTMR1Q13613 665 aa6.4□□□□□ -1.38
LINC00440-201ENST00000446579 INF2Q27J81 1249 aa6.4□□□□□ -1.38
LINC00440-201ENST00000446579 ABHD17CQ6PCB6 329 aa6.4□□□□□ -1.38
LINC00440-201ENST00000446579 KCNT2Q6UVM3 1135 aa6.4□□□□□ -1.38
LINC00440-201ENST00000446579 PPIL6Q8IXY8 311 aa6.4□□□□□ -1.38
LINC00440-201ENST00000446579 ADGRG2Q8IZP9 1017 aa6.4□□□□□ -1.38
LINC00440-201ENST00000446579 OR2W6PQ8NHA6 318 aa6.4□□□□□ -1.38
LINC00440-201ENST00000446579 DPF3Q92784 378 aa6.4□□□□□ -1.38
LINC00440-201ENST00000446579 BORCS6Q96GS4 357 aa6.4□□□□□ -1.38
LINC00440-201ENST00000446579 TTC1Q99614 292 aa6.4□□□□□ -1.38
LINC00440-201ENST00000446579 PHF20Q9BVI0 1012 aa6.4□□□□□ -1.38
LINC00440-201ENST00000446579 RNF38Q9H0F5 515 aa6.4□□□□□ -1.38
LINC00440-201ENST00000446579 USP40Q9NVE5 1235 aa6.4□□□□□ -1.38
LINC00440-201ENST00000446579 MARCH2Q9P0N8 246 aa6.4□□□□□ -1.38
LINC00440-201ENST00000446579 PCDHA9Q9Y5H5 950 aa6.4□□□□□ -1.38
LINC00440-201ENST00000446579 CCDC194A0A1B0GVG4 234 aa6.39□□□□□ -1.39
LINC00440-201ENST00000446579 CBX4O00257 560 aa6.39□□□□□ -1.39
LINC00440-201ENST00000446579 WNT9AO14904 365 aa6.39□□□□□ -1.39
LINC00440-201ENST00000446579 TSPAN6O43657 245 aa6.39□□□□□ -1.39
LINC00440-201ENST00000446579 NCAM1P13591 858 aa6.39□□□□□ -1.39
LINC00440-201ENST00000446579 NEK2P51955 445 aa6.39□□□□□ -1.39
LINC00440-201ENST00000446579 RTP5Q14D33 572 aa6.39□□□□□ -1.39
LINC00440-201ENST00000446579 PIK3R6Q5UE93 754 aa6.39□□□□□ -1.39
LINC00440-201ENST00000446579 DDX53Q86TM3 631 aaKnown RBP6.39□□□□□ -1.39
LINC00440-201ENST00000446579 CCDC103Q8IW40 242 aa6.39□□□□□ -1.39
LINC00440-201ENST00000446579 IFNL3Q8IZI9 196 aa6.39□□□□□ -1.39
LINC00440-201ENST00000446579 PLEKHO2Q8TD55 490 aa6.39□□□□□ -1.39
LINC00440-201ENST00000446579 ALG3Q92685 438 aa6.39□□□□□ -1.39
LINC00440-201ENST00000446579 USP7Q93009 1102 aa6.39□□□□□ -1.39
LINC00440-201ENST00000446579 WNK4Q96J92 1243 aa6.39□□□□□ -1.39
LINC00440-201ENST00000446579 PCGF6Q9BYE7 350 aa6.39□□□□□ -1.39
LINC00440-201ENST00000446579 TMEFF2Q9UIK5 374 aaPredicted RBP6.39□□□□□ -1.39
LINC00440-201ENST00000446579 APOBEC2Q9Y235 224 aaKnown RBP6.39□□□□□ -1.39
LINC00440-201ENST00000446579 PMF1-BGLAPU3KQ54 211 aa6.39□□□□□ -1.39
LINC00440-201ENST00000446579 A0A1B0GTL3 188 aa6.38□□□□□ -1.39
LINC00440-201ENST00000446579 C22orf46C9J442 243 aa6.38□□□□□ -1.39
LINC00440-201ENST00000446579 NEMP1O14524 444 aa6.38□□□□□ -1.39
LINC00440-201ENST00000446579 PRICKLE3O43900 615 aaPredicted RBP6.38□□□□□ -1.39
LINC00440-201ENST00000446579 F2P00734 622 aa6.38□□□□□ -1.39
LINC00440-201ENST00000446579 NTRK1P04629 796 aa6.38□□□□□ -1.39
LINC00440-201ENST00000446579 APPP05067 770 aa6.38□□□□□ -1.39
LINC00440-201ENST00000446579 CKMP06732 381 aa6.38□□□□□ -1.39
LINC00440-201ENST00000446579 FBLN1P23142 703 aa6.38□□□□□ -1.39
LINC00440-201ENST00000446579 IGFBP6P24592 240 aaPredicted RBP6.38□□□□□ -1.39
LINC00440-201ENST00000446579 LTBRP36941 435 aa6.38□□□□□ -1.39
LINC00440-201ENST00000446579 SCNN1BP51168 640 aa6.38□□□□□ -1.39
LINC00440-201ENST00000446579 TBX4P57082 545 aa6.38□□□□□ -1.39
LINC00440-201ENST00000446579 KRTAP10-2P60368 255 aa6.38□□□□□ -1.39
LINC00440-201ENST00000446579 FOXO4P98177 505 aa6.38□□□□□ -1.39
LINC00440-201ENST00000446579 GUCY1A3Q02108 690 aa6.38□□□□□ -1.39
LINC00440-201ENST00000446579 DSG1Q02413 1049 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms