RNA–Protein interactions for RNA: ENST00000445692.5

APLF-203, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 3,906 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-203ENST00000445692 TMOD4Q9NZQ9 345 aa13.15□□□□□ -0.3
APLF-203ENST00000445692 EPHB6O15197 1021 aa13.15□□□□□ -0.3
APLF-203ENST00000445692 KRT5P13647 590 aa13.15□□□□□ -0.3
APLF-203ENST00000445692 ELF1P32519 619 aa13.15□□□□□ -0.3
APLF-203ENST00000445692 PTGISQ16647 500 aa13.15□□□□□ -0.3
APLF-203ENST00000445692 ZNF746Q6NUN9 644 aaPredicted RBP13.15□□□□□ -0.3
APLF-203ENST00000445692 SPATS2Q86XZ4 545 aaKnown RBP13.15□□□□□ -0.3
APLF-203ENST00000445692 KAT2BQ92831 832 aa13.15□□□□□ -0.3
APLF-203ENST00000445692 RAB17Q9H0T7 212 aa13.15□□□□□ -0.3
APLF-203ENST00000445692 DCP1AQ9NPI6 582 aaPredicted RBP13.15□□□□□ -0.3
APLF-203ENST00000445692 NCAPD2Q15021 1401 aa13.15□□□□□ -0.3
APLF-203ENST00000445692 KRT15P19012 456 aa13.14□□□□□ -0.31
APLF-203ENST00000445692 PPP2R2AP63151 447 aa13.14□□□□□ -0.31
APLF-203ENST00000445692 ERFEQ4G0M1 354 aa13.14□□□□□ -0.31
APLF-203ENST00000445692 PAPD7Q5XG87 772 aaKnown RBP13.14□□□□□ -0.31
APLF-203ENST00000445692 ARL6IP4Q66PJ3 421 aaKnown RBP13.14□□□□□ -0.31
APLF-203ENST00000445692 WDR59Q6PJI9 974 aa13.14□□□□□ -0.31
APLF-203ENST00000445692 TAF1DQ9H5J8 278 aaPredicted RBP13.14□□□□□ -0.31
APLF-203ENST00000445692 FAM53CQ9NYF3 392 aa13.14□□□□□ -0.31
APLF-203ENST00000445692 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.14□□□□□ -0.31
APLF-203ENST00000445692 MTUS1Q9ULD2 1270 aa13.14□□□□□ -0.31
APLF-203ENST00000445692 ALX1Q15699 326 aa13.14□□□□□ -0.31
APLF-203ENST00000445692 NSMFQ6X4W1 530 aa13.14□□□□□ -0.31
APLF-203ENST00000445692 CCDC87Q9NVE4 849 aa13.14□□□□□ -0.31
APLF-203ENST00000445692 HDAC9Q9UKV0 1011 aa13.14□□□□□ -0.31
APLF-203ENST00000445692 MYMKA6NI61 221 aa13.14□□□□□ -0.31
APLF-203ENST00000445692 PDHA1P08559 390 aa13.14□□□□□ -0.31
APLF-203ENST00000445692 RPL13P26373 211 aaKnown RBP13.14□□□□□ -0.31
APLF-203ENST00000445692 TROAPQ12815 778 aa13.14□□□□□ -0.31
APLF-203ENST00000445692 EMILIN3Q9NT22 766 aa13.14□□□□□ -0.31
APLF-203ENST00000445692 DNM3Q9UQ16 869 aa13.14□□□□□ -0.31
APLF-203ENST00000445692 NOC2LQ9Y3T9 749 aaKnown RBP13.14□□□□□ -0.31
APLF-203ENST00000445692 MST1RQ04912 1400 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 A0A087X0T9 212 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 WDR91A4D1P6 747 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 CCDC160A6NGH7 325 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 UBAP1LF5GYI3 381 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 FAM228BP0C875 321 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 SLC8A1P32418 973 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 STAT3P40763 770 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 DPP8Q6V1X1 898 aaPredicted RBP13.13□□□□□ -0.31
APLF-203ENST00000445692 SPDL1Q96EA4 605 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 IRAK4Q9NWZ3 460 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 INTUQ9ULD6 942 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 TPX2Q9ULW0 747 aaKnown RBP13.13□□□□□ -0.31
APLF-203ENST00000445692 POC1B-GALNT4F8VUJ3 575 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 FGFR4P22455 802 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 KCNH2Q12809 1159 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 PDXDC2PQ6P474 469 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 CUL5Q93034 780 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 SEC16BQ96JE7 1060 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 IFT74Q96LB3 600 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 GCNT4Q9P109 453 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 POTEB3A0JP26 581 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 POTECB2RU33 542 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 IFNB1P01574 187 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 DDB1Q16531 1140 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 PDXDC1Q6P996 788 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 GJB7Q6PEY0 223 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 POTEBQ6S5H4 581 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 CREG2Q8IUH2 290 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 TMEM47Q9BQJ4 181 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 PCIF1Q9H4Z3 704 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 DBR1Q9UK59 544 aaKnown RBP13.13□□□□□ -0.31
APLF-203ENST00000445692 FRMD4BQ9Y2L6 1034 aa13.13□□□□□ -0.31
APLF-203ENST00000445692 FMN2Q9NZ56 1722 aa13.12□□□□□ -0.31
APLF-203ENST00000445692 SLC9A1P19634 815 aa13.12□□□□□ -0.31
APLF-203ENST00000445692 NAIF1Q69YI7 327 aaPredicted RBP13.12□□□□□ -0.31
APLF-203ENST00000445692 TTI2Q6NXR4 508 aa13.12□□□□□ -0.31
APLF-203ENST00000445692 GLIS3Q8NEA6 775 aa13.12□□□□□ -0.31
APLF-203ENST00000445692 CELF1Q92879 486 aaKnown RBP13.12□□□□□ -0.31
APLF-203ENST00000445692 CCDC127Q96BQ5 260 aa13.12□□□□□ -0.31
APLF-203ENST00000445692 PSMD1Q99460 953 aa13.12□□□□□ -0.31
APLF-203ENST00000445692 ZMYND12Q9H0C1 365 aa13.12□□□□□ -0.31
APLF-203ENST00000445692 PCDHA6Q9UN73 950 aa13.12□□□□□ -0.31
APLF-203ENST00000445692 PCDHA8Q9Y5H6 950 aa13.12□□□□□ -0.31
APLF-203ENST00000445692 PDS5AQ29RF7 1337 aaKnown RBP13.12□□□□□ -0.31
APLF-203ENST00000445692 CCDC169A6NNP5 214 aa13.12□□□□□ -0.31
APLF-203ENST00000445692 HIP1RO75146 1068 aa13.12□□□□□ -0.31
APLF-203ENST00000445692 AMPD2Q01433 879 aa13.12□□□□□ -0.31
APLF-203ENST00000445692 SATB1Q01826 763 aa13.12□□□□□ -0.31
APLF-203ENST00000445692 RBBP5Q15291 538 aaKnown RBP13.12□□□□□ -0.31
APLF-203ENST00000445692 GLYCTKQ8IVS8 523 aa13.12□□□□□ -0.31
APLF-203ENST00000445692 GLG1Q92896 1179 aa13.12□□□□□ -0.31
APLF-203ENST00000445692 DNAJC7Q99615 494 aa13.12□□□□□ -0.31
APLF-203ENST00000445692 CCDC77Q9BR77 488 aa13.12□□□□□ -0.31
APLF-203ENST00000445692 STMN4Q9H169 189 aaPredicted RBP13.12□□□□□ -0.31
APLF-203ENST00000445692 PSTPIP2Q9H939 334 aa13.12□□□□□ -0.31
APLF-203ENST00000445692 USP17L15C9J2P7 530 aa13.12□□□□□ -0.31
APLF-203ENST00000445692 USP17L13C9JLJ4 530 aa13.12□□□□□ -0.31
APLF-203ENST00000445692 USP17L11C9JVI0 530 aa13.12□□□□□ -0.31
APLF-203ENST00000445692 USP17L18D6R9N7 530 aa13.12□□□□□ -0.31
APLF-203ENST00000445692 USP17L22D6RA61 530 aa13.12□□□□□ -0.31
APLF-203ENST00000445692 USP17L17D6RBQ6 530 aa13.12□□□□□ -0.31
APLF-203ENST00000445692 USP17L19D6RCP7 530 aa13.12□□□□□ -0.31
APLF-203ENST00000445692 USP17L20D6RJB6 530 aa13.12□□□□□ -0.31
APLF-203ENST00000445692 OPLAHO14841 1288 aa13.12□□□□□ -0.31
APLF-203ENST00000445692 KIF1CO43896 1103 aaKnown RBP13.12□□□□□ -0.31
APLF-203ENST00000445692 DIAPH2O60879 1101 aa13.12□□□□□ -0.31
APLF-203ENST00000445692 UFL1O94874 794 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms