RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 UIMC1Q96RL1 719 aa24.87■■□□□ 1.57
TRAF4-205ENST00000444415 JPH1Q9HDC5 661 aaPredicted RBP24.87■■□□□ 1.57
TRAF4-205ENST00000444415 KAT6AQ92794 2004 aa24.86■■□□□ 1.57
TRAF4-205ENST00000444415 UTP14CQ5TAP6 766 aaKnown RBP24.86■■□□□ 1.57
TRAF4-205ENST00000444415 C7orf31Q8N865 590 aa24.86■■□□□ 1.57
TRAF4-205ENST00000444415 OXER1Q8TDS5 423 aa24.86■■□□□ 1.57
TRAF4-205ENST00000444415 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.86■■□□□ 1.573e-8■■□□□ 13.4
TRAF4-205ENST00000444415 LIMCH1Q9UPQ0 1083 aa24.86■■□□□ 1.57
TRAF4-205ENST00000444415 CCNE2O96020 404 aa24.85■■□□□ 1.57
TRAF4-205ENST00000444415 ACRP10323 421 aa24.85■■□□□ 1.57
TRAF4-205ENST00000444415 ZNF76P36508 570 aa24.85■■□□□ 1.57
TRAF4-205ENST00000444415 TBCKQ8TEA7 893 aa24.85■■□□□ 1.57
TRAF4-205ENST00000444415 SEPT1Q8WYJ6 367 aa24.85■■□□□ 1.57
TRAF4-205ENST00000444415 SLC9A2Q9UBY0 812 aa24.85■■□□□ 1.57
TRAF4-205ENST00000444415 GTF3C3Q9Y5Q9 886 aa24.85■■□□□ 1.57
TRAF4-205ENST00000444415 COL6A3P12111 3177 aa24.85■■□□□ 1.57
TRAF4-205ENST00000444415 SMIM10L2AP0DMW4 78 aa24.84■■□□□ 1.57
TRAF4-205ENST00000444415 SMIM10L2BP0DMW5 78 aa24.84■■□□□ 1.57
TRAF4-205ENST00000444415 TRIM71Q2Q1W2 868 aaKnown RBP24.84■■□□□ 1.57
TRAF4-205ENST00000444415 TMEM240Q5SV17 173 aa24.84■■□□□ 1.57
TRAF4-205ENST00000444415 TMEM199Q8N511 208 aa24.84■■□□□ 1.57
TRAF4-205ENST00000444415 RNPEPQ9H4A4 650 aa24.84■■□□□ 1.57
TRAF4-205ENST00000444415 PITPNM1O00562 1244 aa24.83■■□□□ 1.57
TRAF4-205ENST00000444415 LGR5O75473 907 aa24.83■■□□□ 1.57
TRAF4-205ENST00000444415 CD2BP2O95400 341 aaKnown RBP24.83■■□□□ 1.57
TRAF4-205ENST00000444415 ADAM17P78536 824 aa24.83■■□□□ 1.57
TRAF4-205ENST00000444415 RBL2Q08999 1139 aa24.83■■□□□ 1.57
TRAF4-205ENST00000444415 GPNMBQ14956 572 aa24.83■■□□□ 1.57
TRAF4-205ENST00000444415 EARS2Q5JPH6 523 aaKnown RBP24.83■■□□□ 1.57
TRAF4-205ENST00000444415 GALNT17Q6IS24 598 aa24.83■■□□□ 1.57
TRAF4-205ENST00000444415 CCDC83Q8IWF9 413 aa24.83■■□□□ 1.57
TRAF4-205ENST00000444415 TBC1D32Q96NH3 1257 aa24.83■■□□□ 1.57
TRAF4-205ENST00000444415 EMSYQ7Z589 1322 aa24.83■■□□□ 1.57
TRAF4-205ENST00000444415 ATG7O95352 703 aa24.83■■□□□ 1.56
TRAF4-205ENST00000444415 ACTR2P61160 394 aa24.83■■□□□ 1.56
TRAF4-205ENST00000444415 PPIGQ13427 754 aaKnown RBP eCLIP24.83■■□□□ 1.565e-10■■■□□ 15.3
TRAF4-205ENST00000444415 PRR16Q569H4 304 aa24.83■■□□□ 1.56
TRAF4-205ENST00000444415 TRAF7Q6Q0C0 670 aa24.83■■□□□ 1.56
TRAF4-205ENST00000444415 IL23AQ9NPF7 189 aa24.83■■□□□ 1.56
TRAF4-205ENST00000444415 EYSQ5T1H1 3165 aa24.82■■□□□ 1.56
TRAF4-205ENST00000444415 IPO5O00410 1097 aaKnown RBP24.82■■□□□ 1.56
TRAF4-205ENST00000444415 TDP2O95551 362 aa24.82■■□□□ 1.56
TRAF4-205ENST00000444415 USP11P51784 963 aa24.82■■□□□ 1.56
TRAF4-205ENST00000444415 SETQ01105 290 aaPredicted RBP24.82■■□□□ 1.56
TRAF4-205ENST00000444415 RASIP1Q5U651 963 aa24.82■■□□□ 1.56
TRAF4-205ENST00000444415 TNFRSF25Q93038 417 aa24.82■■□□□ 1.56
TRAF4-205ENST00000444415 SDF4Q9BRK5 362 aa24.82■■□□□ 1.56
TRAF4-205ENST00000444415 NOD1Q9Y239 953 aa24.82■■□□□ 1.56
TRAF4-205ENST00000444415 CHD9Q3L8U1 2897 aa24.81■■□□□ 1.56
TRAF4-205ENST00000444415 DDX39AO00148 427 aaKnown RBP24.81■■□□□ 1.56
TRAF4-205ENST00000444415 IQCF3P0C7M6 154 aa24.81■■□□□ 1.56
TRAF4-205ENST00000444415 RABEP1Q15276 862 aa24.81■■□□□ 1.56
TRAF4-205ENST00000444415 ZNF365Q70YC5 407 aa24.81■■□□□ 1.56
TRAF4-205ENST00000444415 MBOAT7Q96N66 472 aa24.81■■□□□ 1.56
TRAF4-205ENST00000444415 SETD4Q9NVD3 440 aa24.81■■□□□ 1.56
TRAF4-205ENST00000444415 SIP14410 1827 aa24.8■■□□□ 1.56
TRAF4-205ENST00000444415 IGKV6D-21A0A0A0MT36 114 aa24.8■■□□□ 1.56
TRAF4-205ENST00000444415 FAM205CA6NFA0 338 aa24.8■■□□□ 1.56
TRAF4-205ENST00000444415 MSH4O15457 936 aa24.8■■□□□ 1.56
TRAF4-205ENST00000444415 TREHO43280 583 aa24.8■■□□□ 1.56
TRAF4-205ENST00000444415 MARK3P27448 753 aa24.8■■□□□ 1.56
TRAF4-205ENST00000444415 INF2Q27J81 1249 aa24.8■■□□□ 1.56
TRAF4-205ENST00000444415 ABHD15Q6UXT9 468 aa24.8■■□□□ 1.56
TRAF4-205ENST00000444415 SERINC5Q86VE9 423 aa24.8■■□□□ 1.56
TRAF4-205ENST00000444415 LMBR1Q8WVP7 490 aa24.8■■□□□ 1.56
TRAF4-205ENST00000444415 GJA10Q969M2 543 aa24.8■■□□□ 1.56
TRAF4-205ENST00000444415 ZNF577Q9BSK1 485 aa24.8■■□□□ 1.56
TRAF4-205ENST00000444415 ZNF215Q9UL58 517 aaPredicted RBP24.8■■□□□ 1.56
TRAF4-205ENST00000444415 CHD7Q9P2D1 2997 aa24.8■■□□□ 1.56
TRAF4-205ENST00000444415 MYH9P35579 1960 aaKnown RBP24.79■■□□□ 1.56
TRAF4-205ENST00000444415 CYP3A7-CYP3A51PA0A087WV96 503 aa24.79■■□□□ 1.56
TRAF4-205ENST00000444415 C17orf102A2RUQ5 167 aa24.79■■□□□ 1.56
TRAF4-205ENST00000444415 CKBP12277 381 aa24.79■■□□□ 1.56
TRAF4-205ENST00000444415 CYP3A7P24462 503 aa24.79■■□□□ 1.56
TRAF4-205ENST00000444415 NR5A1Q13285 461 aa24.79■■□□□ 1.56
TRAF4-205ENST00000444415 PTK7Q13308 1070 aa24.79■■□□□ 1.56
TRAF4-205ENST00000444415 CAGE1Q8TC20 777 aa24.79■■□□□ 1.56
TRAF4-205ENST00000444415 RNPC3Q96LT9 517 aaKnown RBP24.79■■□□□ 1.56
TRAF4-205ENST00000444415 SLC34A2O95436 690 aa24.78■■□□□ 1.56
TRAF4-205ENST00000444415 NONOQ15233 471 aaKnown RBP eCLIP24.78■■□□□ 1.562e-7■■□□□ 12.9
TRAF4-205ENST00000444415 FAM109BQ6ICB4 259 aaPredicted RBP24.78■■□□□ 1.56
TRAF4-205ENST00000444415 KRT25Q7Z3Z0 450 aa24.78■■□□□ 1.56
TRAF4-205ENST00000444415 CCDC60Q8IWA6 550 aaPredicted RBP24.78■■□□□ 1.56
TRAF4-205ENST00000444415 WASF1Q92558 559 aa24.78■■□□□ 1.56
TRAF4-205ENST00000444415 ERAP1Q9NZ08 941 aa24.78■■□□□ 1.56
TRAF4-205ENST00000444415 CXXC1Q9P0U4 656 aaPredicted RBP24.78■■□□□ 1.56
TRAF4-205ENST00000444415 GBF1Q92538 1859 aa24.78■■□□□ 1.56
TRAF4-205ENST00000444415 PTPRSQ13332 1948 aa24.78■■□□□ 1.56
TRAF4-205ENST00000444415 FOSBP53539 338 aa24.77■■□□□ 1.56
TRAF4-205ENST00000444415 BFSP2Q13515 415 aa24.77■■□□□ 1.56
TRAF4-205ENST00000444415 MBTPS1Q14703 1052 aa24.77■■□□□ 1.56
TRAF4-205ENST00000444415 Q4G0T1 1027 aa24.77■■□□□ 1.56
TRAF4-205ENST00000444415 PSRC1Q6PGN9 363 aaPredicted RBP24.77■■□□□ 1.56
TRAF4-205ENST00000444415 AFAP1L1Q8TED9 768 aa24.77■■□□□ 1.56
TRAF4-205ENST00000444415 ATP6V0A1Q93050 837 aa24.77■■□□□ 1.56
TRAF4-205ENST00000444415 BACH2Q9BYV9 841 aa24.77■■□□□ 1.56
TRAF4-205ENST00000444415 SMARCAD1Q9H4L7 1026 aa24.77■■□□□ 1.56
TRAF4-205ENST00000444415 SLC37A4O43826 429 aa24.77■■□□□ 1.56
TRAF4-205ENST00000444415 XBP1P17861 261 aa24.77■■□□□ 1.56
TRAF4-205ENST00000444415 MARCH8Q5T0T0 291 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms