RNA–Protein interactions for RNA: ENST00000443722.5

PMPCB-203, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-203ENST00000443722 PKN1Q16512 942 aa15.16■□□□□ 0.02
PMPCB-203ENST00000443722 PPP2R2DQ66LE6 453 aa15.16■□□□□ 0.02
PMPCB-203ENST00000443722 PPP1R18Q6NYC8 613 aa15.16■□□□□ 0.02
PMPCB-203ENST00000443722 SPRED2Q7Z698 418 aa15.16■□□□□ 0.02
PMPCB-203ENST00000443722 USP38Q8NB14 1042 aa15.16■□□□□ 0.02
PMPCB-203ENST00000443722 ZBTB10Q96DT7 871 aa15.16■□□□□ 0.02
PMPCB-203ENST00000443722 MXRA8Q9BRK3 442 aa15.16■□□□□ 0.02
PMPCB-203ENST00000443722 DOCK5Q9H7D0 1870 aa15.15■□□□□ 0.02
PMPCB-203ENST00000443722 CCDC196A0A1B0GTZ2 297 aa15.15■□□□□ 0.02
PMPCB-203ENST00000443722 RFXAPO00287 272 aa15.15■□□□□ 0.02
PMPCB-203ENST00000443722 PDIA3P30101 505 aaKnown RBP15.15■□□□□ 0.02
PMPCB-203ENST00000443722 HOXC8P31273 242 aa15.15■□□□□ 0.02
PMPCB-203ENST00000443722 RCAN1P53805 252 aa15.15■□□□□ 0.02
PMPCB-203ENST00000443722 WDR5P61964 334 aaKnown RBP15.15■□□□□ 0.02
PMPCB-203ENST00000443722 ARHGAP4P98171 946 aa15.15■□□□□ 0.02
PMPCB-203ENST00000443722 TOB2Q14106 344 aaPredicted RBP15.15■□□□□ 0.02
PMPCB-203ENST00000443722 NTRK3Q16288 839 aa15.15■□□□□ 0.02
PMPCB-203ENST00000443722 RUFY3Q7L099 469 aa15.15■□□□□ 0.02
PMPCB-203ENST00000443722 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.15■□□□□ 0.02
PMPCB-203ENST00000443722 RASGRP4Q8TDF6 673 aa15.15■□□□□ 0.02
PMPCB-203ENST00000443722 LMBR1Q8WVP7 490 aa15.15■□□□□ 0.02
PMPCB-203ENST00000443722 SEPT1Q8WYJ6 367 aa15.15■□□□□ 0.02
PMPCB-203ENST00000443722 CDHR1Q96JP9 859 aa15.15■□□□□ 0.02
PMPCB-203ENST00000443722 SLC26A6Q9BXS9 759 aa15.15■□□□□ 0.02
PMPCB-203ENST00000443722 AGXT2Q9BYV1 514 aa15.15■□□□□ 0.02
PMPCB-203ENST00000443722 ZSWIM6Q9HCJ5 1215 aa15.15■□□□□ 0.02
PMPCB-203ENST00000443722 ZNF215Q9UL58 517 aaPredicted RBP15.15■□□□□ 0.02
PMPCB-203ENST00000443722 PCDHA11Q9Y5I1 949 aa15.15■□□□□ 0.02
PMPCB-203ENST00000443722 TRIP12Q14669 1992 aaPredicted RBP15.14■□□□□ 0.01
PMPCB-203ENST00000443722 RSPH10B2B2RC85 870 aa15.14■□□□□ 0.01
PMPCB-203ENST00000443722 DDX39AO00148 427 aaKnown RBP15.14■□□□□ 0.01
PMPCB-203ENST00000443722 DLL1O00548 723 aa15.14■□□□□ 0.01
PMPCB-203ENST00000443722 CXCL10P02778 98 aa15.14■□□□□ 0.01
PMPCB-203ENST00000443722 RSPH10BP0C881 870 aa15.14■□□□□ 0.01
PMPCB-203ENST00000443722 IGFBP4P22692 258 aa15.14■□□□□ 0.01
PMPCB-203ENST00000443722 CLK2P49760 499 aaKnown RBP15.14■□□□□ 0.01
PMPCB-203ENST00000443722 STK3Q13188 491 aa15.14■□□□□ 0.01
PMPCB-203ENST00000443722 ITGB3BPQ13352 177 aaPredicted RBP15.14■□□□□ 0.01
PMPCB-203ENST00000443722 CCDC85BQ15834 202 aaPredicted RBP15.14■□□□□ 0.01
PMPCB-203ENST00000443722 CEP55Q53EZ4 464 aa15.14■□□□□ 0.01
PMPCB-203ENST00000443722 FAM117BQ6P1L5 589 aa15.14■□□□□ 0.01
PMPCB-203ENST00000443722 RUFY4Q6ZNE9 571 aa15.14■□□□□ 0.01
PMPCB-203ENST00000443722 HERC6Q8IVU3 1022 aa15.14■□□□□ 0.01
PMPCB-203ENST00000443722 GIMAP8Q8ND71 665 aaPredicted RBP15.14■□□□□ 0.01
PMPCB-203ENST00000443722 GLG1Q92896 1179 aa15.14■□□□□ 0.01
PMPCB-203ENST00000443722 PCYT2Q99447 389 aa15.14■□□□□ 0.01
PMPCB-203ENST00000443722 EHMT1Q9H9B1 1298 aa15.14■□□□□ 0.01
PMPCB-203ENST00000443722 JPH1Q9HDC5 661 aaPredicted RBP15.14■□□□□ 0.01
PMPCB-203ENST00000443722 TANC1Q9C0D5 1861 aa15.13■□□□□ 0.01
PMPCB-203ENST00000443722 LCHNA4D1U4 455 aa15.13■□□□□ 0.01
PMPCB-203ENST00000443722 FAM86B1E9PN63 330 aa15.13■□□□□ 0.01
PMPCB-203ENST00000443722 hCG_1984214I3L0E3 225 aa15.13■□□□□ 0.01
PMPCB-203ENST00000443722 PRPF3O43395 683 aaKnown RBP15.13■□□□□ 0.01
PMPCB-203ENST00000443722 FOSP01100 380 aaPredicted RBP15.13■□□□□ 0.01
PMPCB-203ENST00000443722 FAM86B2P0C5J1 330 aa15.13■□□□□ 0.01
PMPCB-203ENST00000443722 ZNF76P36508 570 aa15.13■□□□□ 0.01
PMPCB-203ENST00000443722 SREBF1P36956 1147 aa15.13■□□□□ 0.01
PMPCB-203ENST00000443722 KCNJ6P48051 423 aa15.13■□□□□ 0.01
PMPCB-203ENST00000443722 IGBP1P78318 339 aa15.13■□□□□ 0.01
PMPCB-203ENST00000443722 CNKSR3Q6P9H4 555 aa15.13■□□□□ 0.01
PMPCB-203ENST00000443722 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.13■□□□□ 0.016e-8■■■□□ 16.8
PMPCB-203ENST00000443722 FBXL16Q8N461 479 aa15.13■□□□□ 0.01
PMPCB-203ENST00000443722 ZNF713Q8N859 430 aaPredicted RBP15.13■□□□□ 0.01
PMPCB-203ENST00000443722 DBF4BQ8NFT6 615 aa15.13■□□□□ 0.01
PMPCB-203ENST00000443722 SLC9A7Q96T83 725 aa15.13■□□□□ 0.01
PMPCB-203ENST00000443722 GAS2L1Q99501 681 aaPredicted RBP15.13■□□□□ 0.01
PMPCB-203ENST00000443722 AGO4Q9HCK5 861 aaKnown RBP15.13■□□□□ 0.01
PMPCB-203ENST00000443722 PRDM6Q9NQX0 595 aa15.13■□□□□ 0.01
PMPCB-203ENST00000443722 VPS54Q9P1Q0 977 aa15.13■□□□□ 0.01
PMPCB-203ENST00000443722 CYP46A1Q9Y6A2 500 aa15.13■□□□□ 0.01
PMPCB-203ENST00000443722 MYO9BQ13459 2157 aa15.12■□□□□ 0.01
PMPCB-203ENST00000443722 EPOPA6NHQ4 379 aa15.12■□□□□ 0.01
PMPCB-203ENST00000443722 MEIS1O00470 390 aa15.12■□□□□ 0.01
PMPCB-203ENST00000443722 LGR5O75473 907 aa15.12■□□□□ 0.01
PMPCB-203ENST00000443722 BAIAP3O94812 1187 aa15.12■□□□□ 0.01
PMPCB-203ENST00000443722 ACTR2P61160 394 aa15.12■□□□□ 0.01
PMPCB-203ENST00000443722 ADAM17P78536 824 aa15.12■□□□□ 0.01
PMPCB-203ENST00000443722 AKAP17AQ02040 695 aaKnown RBP15.12■□□□□ 0.01
PMPCB-203ENST00000443722 PPFIA1Q13136 1202 aa15.12■□□□□ 0.01
PMPCB-203ENST00000443722 AP3B2Q13367 1082 aa15.12■□□□□ 0.01
PMPCB-203ENST00000443722 SLC9A2Q9UBY0 812 aa15.12■□□□□ 0.01
PMPCB-203ENST00000443722 NID2Q14112 1375 aa15.12■□□□□ 0.01
PMPCB-203ENST00000443722 XIRP2A4UGR9 3374 aa15.11■□□□□ 0.01
PMPCB-203ENST00000443722 MAFGO15525 162 aa15.11■□□□□ 0.01
PMPCB-203ENST00000443722 TLL1O43897 1013 aa15.11■□□□□ 0.01
PMPCB-203ENST00000443722 CCNE2O96020 404 aa15.11■□□□□ 0.01
PMPCB-203ENST00000443722 GNAT1P11488 350 aa15.11■□□□□ 0.01
PMPCB-203ENST00000443722 EVCP57679 992 aa15.11■□□□□ 0.01
PMPCB-203ENST00000443722 TAP1Q03518 808 aa15.11■□□□□ 0.01
PMPCB-203ENST00000443722 GRIK4Q16099 956 aa15.11■□□□□ 0.01
PMPCB-203ENST00000443722 REXO1Q8N1G1 1221 aaKnown RBP15.11■□□□□ 0.01
PMPCB-203ENST00000443722 MICALL1Q8N3F8 863 aa15.11■□□□□ 0.01
PMPCB-203ENST00000443722 PHOSPHO2Q8TCD6 241 aa15.11■□□□□ 0.01
PMPCB-203ENST00000443722 TRAPPC12Q8WVT3 735 aa15.11■□□□□ 0.01
PMPCB-203ENST00000443722 ARNTL2Q8WYA1 636 aa15.11■□□□□ 0.01
PMPCB-203ENST00000443722 SDF4Q9BRK5 362 aa15.11■□□□□ 0.01
PMPCB-203ENST00000443722 ZBED2Q9BTP6 218 aa15.11■□□□□ 0.01
PMPCB-203ENST00000443722 ZMYND12Q9H0C1 365 aa15.11■□□□□ 0.01
PMPCB-203ENST00000443722 C6orf50Q9HD87 102 aa15.11■□□□□ 0.01
PMPCB-203ENST00000443722 ERAP1Q9NZ08 941 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms