RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 DIS3Q9Y2L1 958 aaKnown RBP11.12□□□□□ -0.63
LIN54-202ENST00000442461 DAB1O75553 588 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 HOXB7P09629 217 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 ELF3P78545 371 aaPredicted RBP11.12□□□□□ -0.63
LIN54-202ENST00000442461 CNGA3Q16281 694 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 RSBN1LQ6PCB5 846 aaPredicted RBP11.12□□□□□ -0.63
LIN54-202ENST00000442461 KDM5CP41229 1560 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 hCG_1642624A0A1W2PR95 340 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 FAM187AA6NFU0 413 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 TRPC1P48995 793 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 KBTBD12Q3ZCT8 623 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 TRAPPC11Q7Z392 1133 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 KRT25Q7Z3Z0 450 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 ZNF654Q8IZM8 581 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 STAG2Q8N3U4 1231 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 MAGEB6Q8N7X4 407 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 CATSPER1Q8NEC5 780 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 RPGRQ92834 1020 aaKnown RBP11.12□□□□□ -0.63
LIN54-202ENST00000442461 SUCLG2Q96I99 432 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 ASCC2Q9H1I8 757 aaPredicted RBP11.12□□□□□ -0.63
LIN54-202ENST00000442461 RBM12Q9NTZ6 932 aaKnown RBP11.12□□□□□ -0.63
LIN54-202ENST00000442461 ZNF229Q9UJW7 825 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 PTCH1Q13635 1447 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 A2MP01023 1474 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 EYA2O00167 538 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 STRNO43815 780 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 ADARP55265 1226 aaKnown RBP11.11□□□□□ -0.63
LIN54-202ENST00000442461 FKBP3Q00688 224 aaKnown RBP11.11□□□□□ -0.63
LIN54-202ENST00000442461 PDE1BQ01064 536 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 RCN1Q15293 331 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 ATG16L1Q676U5 607 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 PROSER2Q86WR7 435 aaPredicted RBP11.11□□□□□ -0.63
LIN54-202ENST00000442461 EHMT1Q9H9B1 1298 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 METTL14Q9HCE5 456 aaKnown RBP11.11□□□□□ -0.63
LIN54-202ENST00000442461 SUCLA2Q9P2R7 463 aaPredicted RBP11.11□□□□□ -0.63
LIN54-202ENST00000442461 TUBE1Q9UJT0 475 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 DBNLQ9UJU6 430 aaKnown RBP11.11□□□□□ -0.63
LIN54-202ENST00000442461 ITIH6Q6UXX5 1313 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 CAPN9O14815 690 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 UBOX5O94941 541 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 GJA8P48165 433 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 SERPINB8P50452 374 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 LRRC36Q1X8D7 754 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 CWF19L1Q69YN2 538 aaKnown RBP11.11□□□□□ -0.63
LIN54-202ENST00000442461 CC2D2BQ6DHV5 1058 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 APOA5Q6Q788 366 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 FANCBQ8NB91 859 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 NMD3Q96D46 503 aaKnown RBP11.11□□□□□ -0.63
LIN54-202ENST00000442461 TRIM10Q9UDY6 481 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 CAPN11Q9UMQ6 739 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 PCDHB13Q9Y5F0 798 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 GOLGA8QA0A0J9YX86 632 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 GOLGA8OA6NCC3 632 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 KLHL33A6NCF5 533 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 GOLGA8NF8WBI6 632 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 FGAP02671 866 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 RFC5P40937 340 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 CYTH1Q15438 398 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 CEP55Q53EZ4 464 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 TRMT1LQ7Z2T5 733 aaKnown RBP11.11□□□□□ -0.63
LIN54-202ENST00000442461 UNC45AQ9H3U1 944 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 OLFML3Q9NRN5 406 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 ADD3Q9UEY8 706 aaKnown RBP11.11□□□□□ -0.63
LIN54-202ENST00000442461 AMACRQ9UHK6 382 aa11.11□□□□□ -0.63
LIN54-202ENST00000442461 PTPRTO14522 1441 aa11.1□□□□□ -0.63
LIN54-202ENST00000442461 MLH1P40692 756 aa11.1□□□□□ -0.63
LIN54-202ENST00000442461 DMPKQ09013 629 aa11.1□□□□□ -0.63
LIN54-202ENST00000442461 ZNF579Q8NAF0 562 aaKnown RBP11.1□□□□□ -0.63
LIN54-202ENST00000442461 KCNH5Q8NCM2 988 aa11.1□□□□□ -0.63
LIN54-202ENST00000442461 MDM1Q8TC05 714 aa11.1□□□□□ -0.63
LIN54-202ENST00000442461 RSAD2Q8WXG1 361 aa11.1□□□□□ -0.63
LIN54-202ENST00000442461 DNAI2Q9GZS0 605 aa11.1□□□□□ -0.63
LIN54-202ENST00000442461 SPC25Q9HBM1 224 aa11.1□□□□□ -0.63
LIN54-202ENST00000442461 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.1□□□□□ -0.63
LIN54-202ENST00000442461 DEAF1O75398 565 aaPredicted RBP11.1□□□□□ -0.63
LIN54-202ENST00000442461 STARD3NLO95772 234 aa11.1□□□□□ -0.63
LIN54-202ENST00000442461 VIL1P09327 827 aaKnown RBP11.1□□□□□ -0.63
LIN54-202ENST00000442461 GCLCP48506 637 aaPredicted RBP11.1□□□□□ -0.63
LIN54-202ENST00000442461 ADAM9Q13443 819 aa11.1□□□□□ -0.63
LIN54-202ENST00000442461 TRIM16LQ309B1 348 aa11.1□□□□□ -0.63
LIN54-202ENST00000442461 TMEM259Q4ZIN3 620 aa11.1□□□□□ -0.63
LIN54-202ENST00000442461 CRLF3Q8IUI8 442 aa11.1□□□□□ -0.63
LIN54-202ENST00000442461 RBBP8NLQ8NC74 664 aaPredicted RBP11.1□□□□□ -0.63
LIN54-202ENST00000442461 SMCR8Q8TEV9 937 aaPredicted RBP11.1□□□□□ -0.63
LIN54-202ENST00000442461 MTBPQ96DY7 904 aa11.1□□□□□ -0.63
LIN54-202ENST00000442461 TRAPPC9Q96Q05 1148 aa11.1□□□□□ -0.63
LIN54-202ENST00000442461 NAP1L4Q99733 375 aaKnown RBP11.1□□□□□ -0.63
LIN54-202ENST00000442461 HAUS7Q99871 368 aa11.1□□□□□ -0.63
LIN54-202ENST00000442461 DMAP1Q9NPF5 467 aaPredicted RBP11.1□□□□□ -0.63
LIN54-202ENST00000442461 DMGDHQ9UI17 866 aaKnown RBP11.1□□□□□ -0.63
LIN54-202ENST00000442461 MAGI1Q96QZ7 1491 aaPredicted RBP11.1□□□□□ -0.63
LIN54-202ENST00000442461 MAGEB6P1A0A0J9YX57 407 aa11.1□□□□□ -0.63
LIN54-202ENST00000442461 WDR46O15213 610 aaKnown RBP11.1□□□□□ -0.63
LIN54-202ENST00000442461 ATP9AO75110 1047 aa11.1□□□□□ -0.63
LIN54-202ENST00000442461 TRAPPC10P48553 1259 aa11.1□□□□□ -0.63
LIN54-202ENST00000442461 CDC37Q16543 378 aaPredicted RBP11.1□□□□□ -0.63
LIN54-202ENST00000442461 FAM26FQ5R3K3 315 aa11.1□□□□□ -0.63
LIN54-202ENST00000442461 KRT26Q7Z3Y9 468 aa11.1□□□□□ -0.63
LIN54-202ENST00000442461 RNF169Q8NCN4 708 aa11.1□□□□□ -0.63
LIN54-202ENST00000442461 NOC2LQ9Y3T9 749 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms