RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 TREHO43280 583 aa21.62■■□□□ 1.05
HMGB3P22-201ENST00000442010 ATP2A2P16615 1042 aaKnown RBP21.62■■□□□ 1.05
HMGB3P22-201ENST00000442010 IFNAR1P17181 557 aa21.62■■□□□ 1.05
HMGB3P22-201ENST00000442010 RABGGTBP53611 331 aa21.62■■□□□ 1.05
HMGB3P22-201ENST00000442010 CEP55Q53EZ4 464 aa21.62■■□□□ 1.05
HMGB3P22-201ENST00000442010 SEPT1Q8WYJ6 367 aa21.62■■□□□ 1.05
HMGB3P22-201ENST00000442010 ATP6V0A1Q93050 837 aa21.62■■□□□ 1.05
HMGB3P22-201ENST00000442010 FTOQ9C0B1 505 aaKnown RBP eCLIP21.62■■□□□ 1.05
HMGB3P22-201ENST00000442010 NKX2-4Q9H2Z4 354 aa21.62■■□□□ 1.05
HMGB3P22-201ENST00000442010 PKD2L1Q9P0L9 805 aa21.62■■□□□ 1.05
HMGB3P22-201ENST00000442010 MSRAQ9UJ68 235 aa21.62■■□□□ 1.05
HMGB3P22-201ENST00000442010 ZNF215Q9UL58 517 aaPredicted RBP21.62■■□□□ 1.05
HMGB3P22-201ENST00000442010 CYP46A1Q9Y6A2 500 aa21.62■■□□□ 1.05
HMGB3P22-201ENST00000442010 RBAK-RBAKDNI3L0D1 243 aa21.61■■□□□ 1.05
HMGB3P22-201ENST00000442010 MEIS1O00470 390 aa21.61■■□□□ 1.05
HMGB3P22-201ENST00000442010 BAIAP3O94812 1187 aa21.61■■□□□ 1.05
HMGB3P22-201ENST00000442010 ARP10275 920 aa21.61■■□□□ 1.05
HMGB3P22-201ENST00000442010 CCT2P78371 535 aaKnown RBP21.61■■□□□ 1.05
HMGB3P22-201ENST00000442010 TCTN1Q2MV58 587 aa21.61■■□□□ 1.05
HMGB3P22-201ENST00000442010 PHOSPHO2Q8TCD6 241 aa21.61■■□□□ 1.05
HMGB3P22-201ENST00000442010 SLC9A7Q96T83 725 aa21.61■■□□□ 1.05
HMGB3P22-201ENST00000442010 NCOA5Q9HCD5 579 aaKnown RBP21.61■■□□□ 1.05
HMGB3P22-201ENST00000442010 SETD4Q9NVD3 440 aa21.61■■□□□ 1.05
HMGB3P22-201ENST00000442010 PCDHA11Q9Y5I1 949 aa21.61■■□□□ 1.05
HMGB3P22-201ENST00000442010 MYH9P35579 1960 aaKnown RBP21.61■■□□□ 1.05
HMGB3P22-201ENST00000442010 NFASCO94856 1347 aa21.6■■□□□ 1.05
HMGB3P22-201ENST00000442010 CYP3A4P08684 503 aa21.6■■□□□ 1.05
HMGB3P22-201ENST00000442010 MYOGP15173 224 aa21.6■■□□□ 1.05
HMGB3P22-201ENST00000442010 ARHGAP4P98171 946 aa21.6■■□□□ 1.05
HMGB3P22-201ENST00000442010 JAKMIP3Q5VZ66 844 aa21.6■■□□□ 1.05
HMGB3P22-201ENST00000442010 CNKSR3Q6P9H4 555 aa21.6■■□□□ 1.05
HMGB3P22-201ENST00000442010 SLC17A8Q8NDX2 589 aa21.6■■□□□ 1.05
HMGB3P22-201ENST00000442010 LMBR1Q8WVP7 490 aa21.6■■□□□ 1.05
HMGB3P22-201ENST00000442010 PCYT2Q99447 389 aa21.6■■□□□ 1.05
HMGB3P22-201ENST00000442010 UPF3BQ9BZI7 483 aaKnown RBP21.6■■□□□ 1.05
HMGB3P22-201ENST00000442010 AGO4Q9HCK5 861 aaKnown RBP21.6■■□□□ 1.05
HMGB3P22-201ENST00000442010 JPH1Q9HDC5 661 aaPredicted RBP21.6■■□□□ 1.05
HMGB3P22-201ENST00000442010 UNC80Q8N2C7 3258 aa21.6■■□□□ 1.05
HMGB3P22-201ENST00000442010 PRUNE2Q8WUY3 3088 aa21.59■■□□□ 1.05
HMGB3P22-201ENST00000442010 EMSYQ7Z589 1322 aa21.59■■□□□ 1.05
HMGB3P22-201ENST00000442010 LOXHD1Q8IVV2 1947 aa21.59■■□□□ 1.05
HMGB3P22-201ENST00000442010 PPFIA3O75145 1194 aa21.59■■□□□ 1.05
HMGB3P22-201ENST00000442010 LGR5O75473 907 aa21.59■■□□□ 1.05
HMGB3P22-201ENST00000442010 THPOP40225 353 aa21.59■■□□□ 1.05
HMGB3P22-201ENST00000442010 ITGB3BPQ13352 177 aaPredicted RBP21.59■■□□□ 1.05
HMGB3P22-201ENST00000442010 NIPA1Q7RTP0 329 aa21.59■■□□□ 1.05
HMGB3P22-201ENST00000442010 CCDC12Q8WUD4 166 aaPredicted RBP21.59■■□□□ 1.05
HMGB3P22-201ENST00000442010 ZNF274Q96GC6 653 aaPredicted RBP21.59■■□□□ 1.05
HMGB3P22-201ENST00000442010 SLC26A6Q9BXS9 759 aa21.59■■□□□ 1.05
HMGB3P22-201ENST00000442010 C6orf50Q9HD87 102 aa21.59■■□□□ 1.05
HMGB3P22-201ENST00000442010 SLC9A2Q9UBY0 812 aa21.59■■□□□ 1.05
HMGB3P22-201ENST00000442010 NRCAMQ92823 1304 aa21.58■■□□□ 1.05
HMGB3P22-201ENST00000442010 IGLV3-22A0A075B6J6 115 aa21.58■■□□□ 1.05
HMGB3P22-201ENST00000442010 FAM86B1E9PN63 330 aa21.58■■□□□ 1.05
HMGB3P22-201ENST00000442010 FAM86B2P0C5J1 330 aa21.58■■□□□ 1.05
HMGB3P22-201ENST00000442010 GNAT1P11488 350 aa21.58■■□□□ 1.05
HMGB3P22-201ENST00000442010 FOSL2P15408 326 aa21.58■■□□□ 1.05
HMGB3P22-201ENST00000442010 WDR5P61964 334 aaKnown RBP21.58■■□□□ 1.05
HMGB3P22-201ENST00000442010 MAFAQ8NHW3 353 aaPredicted RBP21.58■■□□□ 1.05
HMGB3P22-201ENST00000442010 LARP6Q9BRS8 491 aaKnown RBP21.58■■□□□ 1.05
HMGB3P22-201ENST00000442010 ERAP1Q9NZ08 941 aa21.58■■□□□ 1.05
HMGB3P22-201ENST00000442010 RSPH10B2B2RC85 870 aa21.57■■□□□ 1.04
HMGB3P22-201ENST00000442010 CAND2O75155 1236 aa21.57■■□□□ 1.04
HMGB3P22-201ENST00000442010 RSPH10BP0C881 870 aa21.57■■□□□ 1.04
HMGB3P22-201ENST00000442010 GNA11P29992 359 aa21.57■■□□□ 1.04
HMGB3P22-201ENST00000442010 AKAP17AQ02040 695 aaKnown RBP21.57■■□□□ 1.04
HMGB3P22-201ENST00000442010 MKRN4PQ13434 485 aaPredicted RBP21.57■■□□□ 1.04
HMGB3P22-201ENST00000442010 MCTP2Q6DN12 878 aa21.57■■□□□ 1.04
HMGB3P22-201ENST00000442010 HERC6Q8IVU3 1022 aa21.57■■□□□ 1.04
HMGB3P22-201ENST00000442010 REXO1Q8N1G1 1221 aaKnown RBP21.57■■□□□ 1.04
HMGB3P22-201ENST00000442010 SMARCAD1Q9H4L7 1026 aa21.57■■□□□ 1.04
HMGB3P22-201ENST00000442010 SLC28A3Q9HAS3 691 aa21.57■■□□□ 1.04
HMGB3P22-201ENST00000442010 PDRG1Q9NUG6 133 aa21.57■■□□□ 1.04
HMGB3P22-201ENST00000442010 ATG7O95352 703 aa21.56■■□□□ 1.04
HMGB3P22-201ENST00000442010 ACTR2P61160 394 aa21.56■■□□□ 1.04
HMGB3P22-201ENST00000442010 IL17RAQ96F46 866 aa21.56■■□□□ 1.04
HMGB3P22-201ENST00000442010 SDF4Q9BRK5 362 aa21.56■■□□□ 1.04
HMGB3P22-201ENST00000442010 OSBPL7Q9BZF2 842 aa21.56■■□□□ 1.04
HMGB3P22-201ENST00000442010 PRDM12Q9H4Q4 367 aa21.56■■□□□ 1.04
HMGB3P22-201ENST00000442010 SH3GLB2Q9NR46 395 aa21.56■■□□□ 1.04
HMGB3P22-201ENST00000442010 VPS54Q9P1Q0 977 aa21.56■■□□□ 1.04
HMGB3P22-201ENST00000442010 EVPLQ92817 2033 aa21.56■■□□□ 1.04
HMGB3P22-201ENST00000442010 ABHD14A-ACY1A0A1B0GW23 586 aa21.55■■□□□ 1.04
HMGB3P22-201ENST00000442010 MBLAC1A4D2B0 266 aaPredicted RBP21.55■■□□□ 1.04
HMGB3P22-201ENST00000442010 DHX15O43143 795 aaKnown RBP21.55■■□□□ 1.04
HMGB3P22-201ENST00000442010 EDIL3O43854 480 aa21.55■■□□□ 1.04
HMGB3P22-201ENST00000442010 CENPBP07199 599 aaPredicted RBP21.55■■□□□ 1.04
HMGB3P22-201ENST00000442010 PLEKHG4Q58EX7 1191 aa21.55■■□□□ 1.04
HMGB3P22-201ENST00000442010 FAM26DQ5JW98 314 aa21.55■■□□□ 1.04
HMGB3P22-201ENST00000442010 MARCH8Q5T0T0 291 aa21.55■■□□□ 1.04
HMGB3P22-201ENST00000442010 RPAINQ86UA6 219 aa21.55■■□□□ 1.04
HMGB3P22-201ENST00000442010 CCDC148Q8NFR7 591 aa21.55■■□□□ 1.04
HMGB3P22-201ENST00000442010 RASGRP4Q8TDF6 673 aa21.55■■□□□ 1.04
HMGB3P22-201ENST00000442010 GLG1Q92896 1179 aa21.55■■□□□ 1.04
HMGB3P22-201ENST00000442010 A0A0C4DFX4 3053 aa21.54■■□□□ 1.04
HMGB3P22-201ENST00000442010 IGKV6D-21A0A0A0MT36 114 aa21.54■■□□□ 1.04
HMGB3P22-201ENST00000442010 CCNE2O96020 404 aa21.54■■□□□ 1.04
HMGB3P22-201ENST00000442010 CA3P07451 260 aa21.54■■□□□ 1.04
HMGB3P22-201ENST00000442010 MARK3P27448 753 aa21.54■■□□□ 1.04
HMGB3P22-201ENST00000442010 CIITAP33076 1130 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms