RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 VSIG1Q86XK7 387 aa6.96□□□□□ -1.3
CNOT1-202ENST00000441024 CACNA2D3Q8IZS8 1091 aa6.96□□□□□ -1.3
CNOT1-202ENST00000441024 TTLL6Q8N841 843 aa6.96□□□□□ -1.3
CNOT1-202ENST00000441024 KRT12Q99456 494 aa6.96□□□□□ -1.3
CNOT1-202ENST00000441024 MRPL47Q9HD33 250 aaKnown RBP6.96□□□□□ -1.3
CNOT1-202ENST00000441024 SEPT9Q9UHD8 586 aaPredicted RBP6.96□□□□□ -1.3
CNOT1-202ENST00000441024 BCAP29Q9UHQ4 241 aa6.96□□□□□ -1.3
CNOT1-202ENST00000441024 CLRN2A0PK11 232 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 LGALS16A8MUM7 142 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 MED7O43513 233 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 DLATP10515 647 aaKnown RBP6.95□□□□□ -1.3
CNOT1-202ENST00000441024 GUCY2FP51841 1108 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 RASA3Q14644 834 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 SMYD4Q8IYR2 804 aaPredicted RBP6.95□□□□□ -1.3
CNOT1-202ENST00000441024 NEDD1Q8NHV4 660 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 RAD54LQ92698 747 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 KIF2CQ99661 725 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 CAPS2Q9BXY5 557 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 ZNF277Q9NRM2 450 aaPredicted RBP6.95□□□□□ -1.3
CNOT1-202ENST00000441024 BARHL2Q9NY43 387 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 PCDHA13Q9Y5I0 950 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 STX2P32856 288 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 EIF4A3P38919 411 aaKnown RBP6.95□□□□□ -1.3
CNOT1-202ENST00000441024 LRRC41Q15345 812 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 GLE1Q53GS7 698 aaKnown RBP6.95□□□□□ -1.3
CNOT1-202ENST00000441024 CEP57Q86XR8 500 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 TRIM50Q86XT4 487 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 CCDC127Q96BQ5 260 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 ZNF408Q9H9D4 720 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 KIAA1586Q9HCI6 787 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 PCDHB4Q9Y5E5 795 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 ZNF646O15015 1829 aaPredicted RBP6.95□□□□□ -1.3
CNOT1-202ENST00000441024 TLR3O15455 904 aaKnown RBP6.95□□□□□ -1.3
CNOT1-202ENST00000441024 LDHAP00338 332 aaKnown RBP6.95□□□□□ -1.3
CNOT1-202ENST00000441024 GNGT1P63211 74 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 MAP7Q14244 749 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 TBC1D9BQ66K14 1250 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 GIMAP8Q8ND71 665 aaPredicted RBP6.95□□□□□ -1.3
CNOT1-202ENST00000441024 TBC1D31Q96DN5 1066 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 PDLIM2Q96JY6 352 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 CEP72Q9P209 647 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 SEL1LQ9UBV2 794 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 GINS2Q9Y248 185 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 ZDHHC9Q9Y397 364 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 UBN2Q6ZU65 1347 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 ANO9A1A5B4 782 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 NEDD9Q14511 834 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 UBE2SQ16763 222 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 DALRD3Q5D0E6 543 aaKnown RBP6.95□□□□□ -1.3
CNOT1-202ENST00000441024 ALS2CLQ60I27 953 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 RHOT2Q8IXI1 618 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 SPICE1Q8N0Z3 855 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 WHAMMQ8TF30 809 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 FAM84BQ96KN1 310 aaPredicted RBP6.95□□□□□ -1.3
CNOT1-202ENST00000441024 CEP170P1Q96L14 293 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 CRAMP1Q96RY5 1269 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 EDEM3Q9BZQ6 932 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 GOLPH3LQ9H4A5 285 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 TBC1D22BQ9NU19 505 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 GCNT4Q9P109 453 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 FBXO40Q9UH90 709 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 PCDHA6Q9UN73 950 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 PCDHA8Q9Y5H6 950 aa6.95□□□□□ -1.3
CNOT1-202ENST00000441024 USP17L5A8MUK1 530 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 CRCPO75575 148 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 USP11P51784 963 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 PRELPP51888 382 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 NKX1-1Q15270 411 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-202ENST00000441024 ARHGAP27Q6ZUM4 889 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 ARMC9Q7Z3E5 817 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 CCDC13Q8IYE1 715 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 CELF1Q92879 486 aaKnown RBP6.94□□□□□ -1.3
CNOT1-202ENST00000441024 SUGCTQ9HAC7 445 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 C5P01031 1676 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 CYP2D6P10635 497 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 CDC27P30260 824 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 MXI1P50539 228 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 ATP2C1P98194 919 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-202ENST00000441024 GUCY2DQ02846 1103 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 KCNB1Q14721 858 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 ELOA2Q8IYF1 753 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-202ENST00000441024 ZNF653Q96CK0 615 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 FAM167AQ96KS9 214 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 RAB3IPQ96QF0 476 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-202ENST00000441024 MAP3K14Q99558 947 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 MED10Q9BTT4 135 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.94□□□□□ -1.3
CNOT1-202ENST00000441024 KLHL14Q9P2G3 628 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 ARHGEF37A1IGU5 675 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 SOWAHDA6NJG2 315 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 CCDC188H7C350 402 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 PRDX5P30044 214 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 MAPK4P31152 587 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 CUL4BQ13620 913 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 KIF22Q14807 665 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 ZSCAN26Q16670 478 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 RSPH3Q86UC2 560 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 LMNTD2Q8IXW0 634 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 TCP11Q8WWU5 503 aa6.94□□□□□ -1.3
CNOT1-202ENST00000441024 ARHGEF1Q92888 912 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms