RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 EFCAB14O75071 495 aa19.26■□□□□ 0.67
COL16A1-204ENST00000440437 CAND2O75155 1236 aa19.26■□□□□ 0.67
COL16A1-204ENST00000440437 RSPH10BP0C881 870 aa19.26■□□□□ 0.67
COL16A1-204ENST00000440437 CPA1P15085 419 aa19.26■□□□□ 0.67
COL16A1-204ENST00000440437 PPM1EQ8WY54 764 aa19.26■□□□□ 0.67
COL16A1-204ENST00000440437 EHMT1Q9H9B1 1298 aa19.26■□□□□ 0.67
COL16A1-204ENST00000440437 BARHL2Q9NY43 387 aa19.26■□□□□ 0.67
COL16A1-204ENST00000440437 SNX14Q9Y5W7 946 aa19.26■□□□□ 0.67
COL16A1-204ENST00000440437 V9GY48 417 aaPredicted RBP19.26■□□□□ 0.67
COL16A1-204ENST00000440437 GSTTP1A0A1W2PQM5 241 aa19.25■□□□□ 0.67
COL16A1-204ENST00000440437 LCHNA4D1U4 455 aa19.25■□□□□ 0.67
COL16A1-204ENST00000440437 MAFGO15525 162 aa19.25■□□□□ 0.67
COL16A1-204ENST00000440437 GNAT1P11488 350 aa19.25■□□□□ 0.67
COL16A1-204ENST00000440437 POU3F3P20264 500 aaPredicted RBP19.25■□□□□ 0.67
COL16A1-204ENST00000440437 CLK2P49760 499 aaKnown RBP19.25■□□□□ 0.67
COL16A1-204ENST00000440437 IKBKEQ14164 716 aa19.25■□□□□ 0.67
COL16A1-204ENST00000440437 PLEKHG4Q58EX7 1191 aa19.25■□□□□ 0.67
COL16A1-204ENST00000440437 SPRED2Q7Z698 418 aa19.25■□□□□ 0.67
COL16A1-204ENST00000440437 DBF4BQ8NFT6 615 aa19.25■□□□□ 0.67
COL16A1-204ENST00000440437 LMBR1Q8WVP7 490 aa19.25■□□□□ 0.67
COL16A1-204ENST00000440437 SEPT1Q8WYJ6 367 aa19.25■□□□□ 0.67
COL16A1-204ENST00000440437 PGBD1Q96JS3 809 aa19.25■□□□□ 0.67
COL16A1-204ENST00000440437 ANO3Q9BYT9 981 aa19.25■□□□□ 0.67
COL16A1-204ENST00000440437 CERS4Q9HA82 394 aa19.25■□□□□ 0.67
COL16A1-204ENST00000440437 NRCAMQ92823 1304 aa19.25■□□□□ 0.67
COL16A1-204ENST00000440437 RFXAPO00287 272 aa19.24■□□□□ 0.67
COL16A1-204ENST00000440437 GJB5O95377 273 aa19.24■□□□□ 0.67
COL16A1-204ENST00000440437 ADCY7P51828 1080 aa19.24■□□□□ 0.67
COL16A1-204ENST00000440437 APOBRQ0VD83 1088 aa19.24■□□□□ 0.67
COL16A1-204ENST00000440437 Q6ZUG5 572 aa19.24■□□□□ 0.67
COL16A1-204ENST00000440437 FBXL16Q8N461 479 aa19.24■□□□□ 0.67
COL16A1-204ENST00000440437 JAKMIP1Q96N16 626 aaKnown RBP19.24■□□□□ 0.67
COL16A1-204ENST00000440437 MXRA8Q9BRK3 442 aa19.24■□□□□ 0.67
COL16A1-204ENST00000440437 AGXT2Q9BYV1 514 aa19.24■□□□□ 0.67
COL16A1-204ENST00000440437 OSBPL7Q9BZF2 842 aa19.24■□□□□ 0.67
COL16A1-204ENST00000440437 PKD2L1Q9P0L9 805 aa19.24■□□□□ 0.67
COL16A1-204ENST00000440437 PRRC2BQ5JSZ5 2229 aaKnown RBP19.24■□□□□ 0.67
COL16A1-204ENST00000440437 NLRC5Q86WI3 1866 aa19.23■□□□□ 0.67
COL16A1-204ENST00000440437 SMCO2A6NFE2 343 aa19.23■□□□□ 0.67
COL16A1-204ENST00000440437 FOSP01100 380 aaPredicted RBP19.23■□□□□ 0.67
COL16A1-204ENST00000440437 CTSHP09668 335 aa19.23■□□□□ 0.67
COL16A1-204ENST00000440437 ADD1P35611 737 aaKnown RBP19.23■□□□□ 0.67
COL16A1-204ENST00000440437 METAP2P50579 478 aaKnown RBP eCLIP19.23■□□□□ 0.67
COL16A1-204ENST00000440437 ARHGAP4P98171 946 aa19.23■□□□□ 0.67
COL16A1-204ENST00000440437 AP3B2Q13367 1082 aa19.23■□□□□ 0.67
COL16A1-204ENST00000440437 CCDC85BQ15834 202 aaPredicted RBP19.23■□□□□ 0.67
COL16A1-204ENST00000440437 BRF1Q92994 677 aa19.23■□□□□ 0.67
COL16A1-204ENST00000440437 KCNH7Q9NS40 1196 aa19.23■□□□□ 0.67
COL16A1-204ENST00000440437 THEGQ9P2T0 379 aa19.23■□□□□ 0.67
COL16A1-204ENST00000440437 MTCH2Q9Y6C9 303 aa19.23■□□□□ 0.67
COL16A1-204ENST00000440437 COL4A6Q14031 1691 aa19.23■□□□□ 0.67
COL16A1-204ENST00000440437 LOXHD1Q8IVV2 1947 aa19.23■□□□□ 0.67
COL16A1-204ENST00000440437 SREBF1P36956 1147 aa19.22■□□□□ 0.67
COL16A1-204ENST00000440437 PFKFB3Q16875 520 aaPredicted RBP19.22■□□□□ 0.67
COL16A1-204ENST00000440437 TJAP1Q5JTD0 557 aa19.22■□□□□ 0.67
COL16A1-204ENST00000440437 FAM26DQ5JW98 314 aa19.22■□□□□ 0.67
COL16A1-204ENST00000440437 BLOC1S2Q6QNY1 142 aa19.22■□□□□ 0.67
COL16A1-204ENST00000440437 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.22■□□□□ 0.67
COL16A1-204ENST00000440437 CYP2W1Q8TAV3 490 aa19.22■□□□□ 0.67
COL16A1-204ENST00000440437 ARNTL2Q8WYA1 636 aa19.22■□□□□ 0.67
COL16A1-204ENST00000440437 PCYT2Q99447 389 aa19.22■□□□□ 0.67
COL16A1-204ENST00000440437 ZBED2Q9BTP6 218 aa19.22■□□□□ 0.67
COL16A1-204ENST00000440437 JPH1Q9HDC5 661 aaPredicted RBP19.22■□□□□ 0.67
COL16A1-204ENST00000440437 TMEM260Q9NX78 707 aa19.22■□□□□ 0.67
COL16A1-204ENST00000440437 ERAP1Q9NZ08 941 aa19.22■□□□□ 0.67
COL16A1-204ENST00000440437 NFASCO94856 1347 aa19.22■□□□□ 0.67
COL16A1-204ENST00000440437 CCDC196A0A1B0GTZ2 297 aa19.21■□□□□ 0.67
COL16A1-204ENST00000440437 RPS6KB1P23443 525 aa19.21■□□□□ 0.67
COL16A1-204ENST00000440437 MARK3P27448 753 aa19.21■□□□□ 0.67
COL16A1-204ENST00000440437 FGD1P98174 961 aa19.21■□□□□ 0.67
COL16A1-204ENST00000440437 CEP55Q53EZ4 464 aa19.21■□□□□ 0.67
COL16A1-204ENST00000440437 RPAINQ86UA6 219 aa19.21■□□□□ 0.67
COL16A1-204ENST00000440437 ATXN2LQ8WWM7 1075 aaKnown RBP19.21■□□□□ 0.67
COL16A1-204ENST00000440437 SYMPKQ92797 1274 aaKnown RBP19.21■□□□□ 0.67
COL16A1-204ENST00000440437 RAD9AQ99638 391 aa19.21■□□□□ 0.67
COL16A1-204ENST00000440437 GLT8D2Q9H1C3 349 aa19.21■□□□□ 0.67
COL16A1-204ENST00000440437 SMARCAD1Q9H4L7 1026 aa19.21■□□□□ 0.67
COL16A1-204ENST00000440437 SLC9A2Q9UBY0 812 aa19.21■□□□□ 0.67
COL16A1-204ENST00000440437 NAP1L2Q9ULW6 460 aaPredicted RBP19.21■□□□□ 0.67
COL16A1-204ENST00000440437 WDR81Q562E7 1941 aa19.21■□□□□ 0.67
COL16A1-204ENST00000440437 RALGAPA2Q2PPJ7 1873 aa19.2■□□□□ 0.66
COL16A1-204ENST00000440437 ESYT2A0FGR8 921 aa19.2■□□□□ 0.66
COL16A1-204ENST00000440437 MBLAC1A4D2B0 266 aaPredicted RBP19.2■□□□□ 0.66
COL16A1-204ENST00000440437 LPXNO60711 386 aa19.2■□□□□ 0.66
COL16A1-204ENST00000440437 REC8O95072 547 aa19.2■□□□□ 0.66
COL16A1-204ENST00000440437 ARP10275 920 aa19.2■□□□□ 0.66
COL16A1-204ENST00000440437 SCG2P13521 617 aa19.2■□□□□ 0.66
COL16A1-204ENST00000440437 PPFIA1Q13136 1202 aa19.2■□□□□ 0.66
COL16A1-204ENST00000440437 GRIK4Q16099 956 aa19.2■□□□□ 0.66
COL16A1-204ENST00000440437 PKN1Q16512 942 aa19.2■□□□□ 0.66
COL16A1-204ENST00000440437 RUFY4Q6ZNE9 571 aa19.2■□□□□ 0.66
COL16A1-204ENST00000440437 SEPT8Q92599 483 aa19.2■□□□□ 0.66
COL16A1-204ENST00000440437 LINC01553A4QN01 128 aa19.19■□□□□ 0.66
COL16A1-204ENST00000440437 MEIS1O00470 390 aa19.19■□□□□ 0.66
COL16A1-204ENST00000440437 AMHP03971 560 aa19.19■□□□□ 0.66
COL16A1-204ENST00000440437 HTRA4P83105 476 aaPredicted RBP19.19■□□□□ 0.66
COL16A1-204ENST00000440437 MGAT3Q09327 533 aa19.19■□□□□ 0.66
COL16A1-204ENST00000440437 GRB10Q13322 594 aa19.19■□□□□ 0.66
COL16A1-204ENST00000440437 ITGB3BPQ13352 177 aaPredicted RBP19.19■□□□□ 0.66
COL16A1-204ENST00000440437 MARCH8Q5T0T0 291 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms