RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 EDIL3O43854 480 aa26.89■■□□□ 1.9
VARS-217ENST00000440048 SMIM10L2AP0DMW4 78 aa26.89■■□□□ 1.9
VARS-217ENST00000440048 SMIM10L2BP0DMW5 78 aa26.89■■□□□ 1.9
VARS-217ENST00000440048 FDPSP14324 419 aaKnown RBP26.89■■□□□ 1.9
VARS-217ENST00000440048 CIITAP33076 1130 aa26.89■■□□□ 1.9
VARS-217ENST00000440048 BFSP2Q13515 415 aa26.89■■□□□ 1.9
VARS-217ENST00000440048 TMEM240Q5SV17 173 aa26.89■■□□□ 1.9
VARS-217ENST00000440048 NSUN7Q8NE18 718 aaKnown RBP26.89■■□□□ 1.9
VARS-217ENST00000440048 DHX38Q92620 1227 aaKnown RBP26.89■■□□□ 1.9
VARS-217ENST00000440048 RNPC3Q96LT9 517 aaKnown RBP26.89■■□□□ 1.9
VARS-217ENST00000440048 PHF20Q9BVI0 1012 aa26.89■■□□□ 1.9
VARS-217ENST00000440048 TANC1Q9C0D5 1861 aa26.88■■□□□ 1.89
VARS-217ENST00000440048 ST3GAL1Q11201 340 aa26.88■■□□□ 1.89
VARS-217ENST00000440048 RETREG2Q8NC44 543 aa26.88■■□□□ 1.89
VARS-217ENST00000440048 WASF1Q92558 559 aa26.88■■□□□ 1.89
VARS-217ENST00000440048 GJB4Q9NTQ9 266 aa26.88■■□□□ 1.89
VARS-217ENST00000440048 XBP1P17861 261 aa26.87■■□□□ 1.89
VARS-217ENST00000440048 HOXC8P31273 242 aa26.87■■□□□ 1.89
VARS-217ENST00000440048 USP11P51784 963 aa26.87■■□□□ 1.89
VARS-217ENST00000440048 SETQ01105 290 aaPredicted RBP26.87■■□□□ 1.89
VARS-217ENST00000440048 ZNF365Q70YC5 407 aa26.87■■□□□ 1.89
VARS-217ENST00000440048 CCDC155Q8N6L0 562 aa26.87■■□□□ 1.89
VARS-217ENST00000440048 CAGE1Q8TC20 777 aa26.87■■□□□ 1.89
VARS-217ENST00000440048 TBCKQ8TEA7 893 aa26.87■■□□□ 1.89
VARS-217ENST00000440048 UIMC1Q96RL1 719 aa26.87■■□□□ 1.89
VARS-217ENST00000440048 RNPEPQ9H4A4 650 aa26.87■■□□□ 1.89
VARS-217ENST00000440048 C17orf102A2RUQ5 167 aa26.86■■□□□ 1.89
VARS-217ENST00000440048 ACTR2P61160 394 aa26.86■■□□□ 1.89
VARS-217ENST00000440048 PTK7Q13308 1070 aa26.86■■□□□ 1.89
VARS-217ENST00000440048 PRR16Q569H4 304 aa26.86■■□□□ 1.89
VARS-217ENST00000440048 PSRC1Q6PGN9 363 aaPredicted RBP26.86■■□□□ 1.89
VARS-217ENST00000440048 VWCEQ96DN2 955 aa26.86■■□□□ 1.89
VARS-217ENST00000440048 ZNF577Q9BSK1 485 aa26.86■■□□□ 1.89
VARS-217ENST00000440048 DDX39AO00148 427 aaKnown RBP26.85■■□□□ 1.89
VARS-217ENST00000440048 IPO5O00410 1097 aaKnown RBP26.85■■□□□ 1.89
VARS-217ENST00000440048 DHX15O43143 795 aaKnown RBP26.85■■□□□ 1.89
VARS-217ENST00000440048 JAK2O60674 1132 aa26.85■■□□□ 1.89
VARS-217ENST00000440048 LGR5O75473 907 aa26.85■■□□□ 1.89
VARS-217ENST00000440048 IQCF3P0C7M6 154 aa26.85■■□□□ 1.89
VARS-217ENST00000440048 RPUSD2Q8IZ73 545 aaKnown RBP26.85■■□□□ 1.89
VARS-217ENST00000440048 DEFB123Q8N688 67 aa26.85■■□□□ 1.89
VARS-217ENST00000440048 GLG1Q92896 1179 aa26.85■■□□□ 1.89
VARS-217ENST00000440048 ATP6V0A1Q93050 837 aa26.85■■□□□ 1.89
VARS-217ENST00000440048 WNT8BQ93098 351 aa26.85■■□□□ 1.89
VARS-217ENST00000440048 LENG9Q96B70 501 aa26.85■■□□□ 1.89
VARS-217ENST00000440048 PCYT2Q99447 389 aa26.85■■□□□ 1.89
VARS-217ENST00000440048 SMARCAD1Q9H4L7 1026 aa26.85■■□□□ 1.89
VARS-217ENST00000440048 UPF2Q9HAU5 1272 aaKnown RBP26.85■■□□□ 1.89
VARS-217ENST00000440048 ERAP1Q9NZ08 941 aa26.85■■□□□ 1.89
VARS-217ENST00000440048 EMSYQ7Z589 1322 aa26.85■■□□□ 1.89
VARS-217ENST00000440048 CCNE2O96020 404 aa26.84■■□□□ 1.89
VARS-217ENST00000440048 RBL2Q08999 1139 aa26.84■■□□□ 1.89
VARS-217ENST00000440048 TRIM71Q2Q1W2 868 aaKnown RBP26.84■■□□□ 1.89
VARS-217ENST00000440048 FAM109BQ6ICB4 259 aaPredicted RBP26.84■■□□□ 1.89
VARS-217ENST00000440048 SERINC5Q86VE9 423 aa26.84■■□□□ 1.89
VARS-217ENST00000440048 AFAP1L1Q8TED9 768 aa26.84■■□□□ 1.89
VARS-217ENST00000440048 SETD4Q9NVD3 440 aa26.84■■□□□ 1.89
VARS-217ENST00000440048 TET1Q8NFU7 2136 aa26.83■■□□□ 1.89
VARS-217ENST00000440048 TREHO43280 583 aa26.83■■□□□ 1.89
VARS-217ENST00000440048 ATG7O95352 703 aa26.83■■□□□ 1.89
VARS-217ENST00000440048 FGBP02675 491 aa26.83■■□□□ 1.89
VARS-217ENST00000440048 CKBP12277 381 aa26.83■■□□□ 1.89
VARS-217ENST00000440048 MARK3P27448 753 aa26.83■■□□□ 1.89
VARS-217ENST00000440048 RFC2P35250 354 aa26.83■■□□□ 1.89
VARS-217ENST00000440048 NONOQ15233 471 aaKnown RBP eCLIP26.83■■□□□ 1.89
VARS-217ENST00000440048 RASIP1Q5U651 963 aa26.83■■□□□ 1.89
VARS-217ENST00000440048 KRT25Q7Z3Z0 450 aa26.83■■□□□ 1.89
VARS-217ENST00000440048 DEFB128Q7Z7B8 93 aa26.83■■□□□ 1.89
VARS-217ENST00000440048 GNAT1P11488 350 aa26.82■■□□□ 1.88
VARS-217ENST00000440048 SELPP16109 830 aa26.82■■□□□ 1.88
VARS-217ENST00000440048 RABEP1Q15276 862 aa26.82■■□□□ 1.88
VARS-217ENST00000440048 CCDC83Q8IWF9 413 aa26.82■■□□□ 1.88
VARS-217ENST00000440048 OXER1Q8TDS5 423 aa26.82■■□□□ 1.88
VARS-217ENST00000440048 HERVK_113Q902F9 699 aa26.82■■□□□ 1.88
VARS-217ENST00000440048 ZSCAN31Q96LW9 406 aaPredicted RBP26.82■■□□□ 1.88
VARS-217ENST00000440048 AZI2Q9H6S1 392 aa26.82■■□□□ 1.88
VARS-217ENST00000440048 TBC1D22BQ9NU19 505 aa26.82■■□□□ 1.88
VARS-217ENST00000440048 PFKMP08237 780 aa26.81■■□□□ 1.88
VARS-217ENST00000440048 ADAM17P78536 824 aa26.81■■□□□ 1.88
VARS-217ENST00000440048 LRRC8DQ7L1W4 858 aa26.81■■□□□ 1.88
VARS-217ENST00000440048 LMBR1Q8WVP7 490 aa26.81■■□□□ 1.88
VARS-217ENST00000440048 NRCAMQ92823 1304 aa26.81■■□□□ 1.88
VARS-217ENST00000440048 CYP3A7-CYP3A51PA0A087WV96 503 aa26.8■■□□□ 1.88
VARS-217ENST00000440048 CCDC194A0A1B0GVG4 234 aa26.8■■□□□ 1.88
VARS-217ENST00000440048 MSH4O15457 936 aa26.8■■□□□ 1.88
VARS-217ENST00000440048 TDP2O95551 362 aa26.8■■□□□ 1.88
VARS-217ENST00000440048 CYP3A7P24462 503 aa26.8■■□□□ 1.88
VARS-217ENST00000440048 STAT5BP51692 787 aa26.8■■□□□ 1.88
VARS-217ENST00000440048 SMAD3P84022 425 aaKnown RBP26.8■■□□□ 1.88
VARS-217ENST00000440048 INF2Q27J81 1249 aa26.8■■□□□ 1.88
VARS-217ENST00000440048 ABHD15Q6UXT9 468 aa26.8■■□□□ 1.88
VARS-217ENST00000440048 OTOP2Q7RTS6 562 aa26.8■■□□□ 1.88
VARS-217ENST00000440048 IGKV6D-21A0A0A0MT36 114 aa26.79■■□□□ 1.88
VARS-217ENST00000440048 PPFIA1Q13136 1202 aa26.79■■□□□ 1.88
VARS-217ENST00000440048 Q4G0T1 1027 aa26.79■■□□□ 1.88
VARS-217ENST00000440048 ZNF618Q5T7W0 954 aa26.79■■□□□ 1.88
VARS-217ENST00000440048 TRAF7Q6Q0C0 670 aa26.79■■□□□ 1.88
VARS-217ENST00000440048 PLPPR4Q7Z2D5 763 aa26.79■■□□□ 1.88
VARS-217ENST00000440048 SH2B1Q9NRF2 756 aaPredicted RBP26.79■■□□□ 1.88
VARS-217ENST00000440048 CXXC1Q9P0U4 656 aaPredicted RBP26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms