RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 ARNTL2Q8WYA1 636 aa18.4■□□□□ 0.54
ITGB1-207ENST00000439974 GPR20Q99678 358 aa18.4■□□□□ 0.54
ITGB1-207ENST00000439974 SENP7Q9BQF6 1050 aa18.4■□□□□ 0.54
ITGB1-207ENST00000439974 C22orf23Q9BZE7 217 aa18.4■□□□□ 0.54
ITGB1-207ENST00000439974 TSPYL2Q9H2G4 693 aaPredicted RBP18.4■□□□□ 0.54
ITGB1-207ENST00000439974 TPCN1Q9ULQ1 816 aa18.4■□□□□ 0.54
ITGB1-207ENST00000439974 EMSYQ7Z589 1322 aa18.4■□□□□ 0.54
ITGB1-207ENST00000439974 RFXAPO00287 272 aa18.39■□□□□ 0.53
ITGB1-207ENST00000439974 EIF5BO60841 1220 aaKnown RBP18.39■□□□□ 0.53
ITGB1-207ENST00000439974 SMIM10L2AP0DMW4 78 aa18.39■□□□□ 0.53
ITGB1-207ENST00000439974 SMIM10L2BP0DMW5 78 aa18.39■□□□□ 0.53
ITGB1-207ENST00000439974 POU3F3P20264 500 aaPredicted RBP18.39■□□□□ 0.53
ITGB1-207ENST00000439974 RCAN1P53805 252 aa18.39■□□□□ 0.53
ITGB1-207ENST00000439974 EVCP57679 992 aa18.39■□□□□ 0.53
ITGB1-207ENST00000439974 DEFB103AP81534 67 aa18.39■□□□□ 0.53
ITGB1-207ENST00000439974 MRPS5P82675 430 aaKnown RBP18.39■□□□□ 0.53
ITGB1-207ENST00000439974 MBTPS1Q14703 1052 aa18.39■□□□□ 0.53
ITGB1-207ENST00000439974 UBE2SQ16763 222 aa18.39■□□□□ 0.53
ITGB1-207ENST00000439974 TCTN1Q2MV58 587 aa18.39■□□□□ 0.53
ITGB1-207ENST00000439974 TYW1BQ6NUM6 668 aa18.39■□□□□ 0.53
ITGB1-207ENST00000439974 ATP6V0A1Q93050 837 aa18.39■□□□□ 0.53
ITGB1-207ENST00000439974 IL17RAQ96F46 866 aa18.39■□□□□ 0.53
ITGB1-207ENST00000439974 ASB2Q96Q27 587 aa18.39■□□□□ 0.53
ITGB1-207ENST00000439974 ZBED2Q9BTP6 218 aa18.39■□□□□ 0.53
ITGB1-207ENST00000439974 PSTPIP2Q9H939 334 aa18.39■□□□□ 0.53
ITGB1-207ENST00000439974 ZNF215Q9UL58 517 aaPredicted RBP18.39■□□□□ 0.53
ITGB1-207ENST00000439974 EPOPA6NHQ4 379 aa18.38■□□□□ 0.53
ITGB1-207ENST00000439974 RSPH10B2B2RC85 870 aa18.38■□□□□ 0.53
ITGB1-207ENST00000439974 LGR5O75473 907 aa18.38■□□□□ 0.53
ITGB1-207ENST00000439974 LARGE1O95461 756 aa18.38■□□□□ 0.53
ITGB1-207ENST00000439974 RSPH10BP0C881 870 aa18.38■□□□□ 0.53
ITGB1-207ENST00000439974 THPOP40225 353 aa18.38■□□□□ 0.53
ITGB1-207ENST00000439974 TMCO2Q7Z6W1 182 aaPredicted RBP18.38■□□□□ 0.53
ITGB1-207ENST00000439974 GIMAP8Q8ND71 665 aaPredicted RBP18.38■□□□□ 0.53
ITGB1-207ENST00000439974 KIF2CQ99661 725 aa18.38■□□□□ 0.53
ITGB1-207ENST00000439974 SLC26A6Q9BXS9 759 aa18.38■□□□□ 0.53
ITGB1-207ENST00000439974 RNPEPQ9H4A4 650 aa18.38■□□□□ 0.53
ITGB1-207ENST00000439974 MTCH2Q9Y6C9 303 aa18.38■□□□□ 0.53
ITGB1-207ENST00000439974 MUC3AQ02505 3323 aa18.38■□□□□ 0.53
ITGB1-207ENST00000439974 NID2Q14112 1375 aa18.38■□□□□ 0.53
ITGB1-207ENST00000439974 CCDC196A0A1B0GTZ2 297 aa18.37■□□□□ 0.53
ITGB1-207ENST00000439974 TREHO43280 583 aa18.37■□□□□ 0.53
ITGB1-207ENST00000439974 CAND2O75155 1236 aa18.37■□□□□ 0.53
ITGB1-207ENST00000439974 GJB5O95377 273 aa18.37■□□□□ 0.53
ITGB1-207ENST00000439974 GNAT1P11488 350 aa18.37■□□□□ 0.53
ITGB1-207ENST00000439974 SP4Q02446 784 aa18.37■□□□□ 0.53
ITGB1-207ENST00000439974 NTRK3Q16288 839 aa18.37■□□□□ 0.53
ITGB1-207ENST00000439974 TRIM50Q86XT4 487 aa18.37■□□□□ 0.53
ITGB1-207ENST00000439974 NECAB1Q8N987 351 aa18.37■□□□□ 0.53
ITGB1-207ENST00000439974 GPRASP2Q96D09 838 aa18.37■□□□□ 0.53
ITGB1-207ENST00000439974 ZNF274Q96GC6 653 aaPredicted RBP18.37■□□□□ 0.53
ITGB1-207ENST00000439974 CDHR1Q96JP9 859 aa18.37■□□□□ 0.53
ITGB1-207ENST00000439974 KAT6AQ92794 2004 aa18.37■□□□□ 0.53
ITGB1-207ENST00000439974 TRANK1O15050 2925 aa18.36■□□□□ 0.53
ITGB1-207ENST00000439974 LCHNA4D1U4 455 aa18.36■□□□□ 0.53
ITGB1-207ENST00000439974 STXBP3O00186 592 aa18.36■□□□□ 0.53
ITGB1-207ENST00000439974 NAPAP54920 295 aa18.36■□□□□ 0.53
ITGB1-207ENST00000439974 SCRN1Q12765 414 aa18.36■□□□□ 0.53
ITGB1-207ENST00000439974 UTP14CQ5TAP6 766 aaKnown RBP18.36■□□□□ 0.53
ITGB1-207ENST00000439974 MICAL3Q7RTP6 2002 aa18.36■□□□□ 0.53
ITGB1-207ENST00000439974 IL27Q8NEV9 243 aa18.36■□□□□ 0.53
ITGB1-207ENST00000439974 RAD9AQ99638 391 aa18.36■□□□□ 0.53
ITGB1-207ENST00000439974 SPDYE3A6NKU9 549 aa18.35■□□□□ 0.53
ITGB1-207ENST00000439974 ADAMTS3O15072 1205 aa18.35■□□□□ 0.53
ITGB1-207ENST00000439974 GRB10Q13322 594 aa18.35■□□□□ 0.53
ITGB1-207ENST00000439974 SKIV2LQ15477 1246 aaKnown RBP18.35■□□□□ 0.53
ITGB1-207ENST00000439974 PKN1Q16512 942 aa18.35■□□□□ 0.53
ITGB1-207ENST00000439974 DBF4BQ8NFT6 615 aa18.35■□□□□ 0.53
ITGB1-207ENST00000439974 SLKQ9H2G2 1235 aaPredicted RBP18.35■□□□□ 0.53
ITGB1-207ENST00000439974 SETD4Q9NVD3 440 aa18.35■□□□□ 0.53
ITGB1-207ENST00000439974 TELO2Q9Y4R8 837 aa18.35■□□□□ 0.53
ITGB1-207ENST00000439974 NCOR1O75376 2440 aa18.35■□□□□ 0.53
ITGB1-207ENST00000439974 TNFRSF10AO00220 468 aa18.34■□□□□ 0.53
ITGB1-207ENST00000439974 PRPF3O43395 683 aaKnown RBP18.34■□□□□ 0.53
ITGB1-207ENST00000439974 AMHP03971 560 aa18.34■□□□□ 0.53
ITGB1-207ENST00000439974 SCG2P13521 617 aa18.34■□□□□ 0.53
ITGB1-207ENST00000439974 KCNA2P16389 499 aa18.34■□□□□ 0.53
ITGB1-207ENST00000439974 IFNAR1P17181 557 aa18.34■□□□□ 0.53
ITGB1-207ENST00000439974 ITGB5P18084 799 aa18.34■□□□□ 0.53
ITGB1-207ENST00000439974 ARHGAP4P98171 946 aa18.34■□□□□ 0.53
ITGB1-207ENST00000439974 ME3Q16798 604 aa18.34■□□□□ 0.53
ITGB1-207ENST00000439974 PFKFB3Q16875 520 aaPredicted RBP18.34■□□□□ 0.53
ITGB1-207ENST00000439974 PLEKHG4Q58EX7 1191 aa18.34■□□□□ 0.53
ITGB1-207ENST00000439974 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.34■□□□□ 0.53
ITGB1-207ENST00000439974 SPRED2Q7Z698 418 aa18.34■□□□□ 0.53
ITGB1-207ENST00000439974 PGBD1Q96JS3 809 aa18.34■□□□□ 0.53
ITGB1-207ENST00000439974 AIFM3Q96NN9 605 aa18.34■□□□□ 0.53
ITGB1-207ENST00000439974 EHMT1Q9H9B1 1298 aa18.34■□□□□ 0.53
ITGB1-207ENST00000439974 PCDHA6Q9UN73 950 aa18.34■□□□□ 0.53
ITGB1-207ENST00000439974 PCDHA8Q9Y5H6 950 aa18.34■□□□□ 0.53
ITGB1-207ENST00000439974 COL4A4P53420 1690 aaPredicted RBP18.34■□□□□ 0.53
ITGB1-207ENST00000439974 REV3LO60673 3130 aa18.34■□□□□ 0.53
ITGB1-207ENST00000439974 NRCAMQ92823 1304 aa18.33■□□□□ 0.53
ITGB1-207ENST00000439974 CPLX1O14810 134 aa18.33■□□□□ 0.52
ITGB1-207ENST00000439974 PFKFB2O60825 505 aa18.33■□□□□ 0.52
ITGB1-207ENST00000439974 ATP9AO75110 1047 aa18.33■□□□□ 0.52
ITGB1-207ENST00000439974 CTSHP09668 335 aa18.33■□□□□ 0.52
ITGB1-207ENST00000439974 TCF7P36402 384 aaPredicted RBP18.33■□□□□ 0.52
ITGB1-207ENST00000439974 RBM25P49756 843 aaKnown RBP18.33■□□□□ 0.52
ITGB1-207ENST00000439974 ADAM17P78536 824 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms