RNA–Protein interactions for RNA: ENST00000439600.2

LMO3-207, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,044 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-207ENST00000439600 RNF207Q6ZRF8 634 aa12.38□□□□□ -0.43
LMO3-207ENST00000439600 Q6ZVU0 165 aa12.38□□□□□ -0.43
LMO3-207ENST00000439600 REXO1Q8N1G1 1221 aaKnown RBP12.38□□□□□ -0.43
LMO3-207ENST00000439600 TXNRD2Q9NNW7 524 aa12.38□□□□□ -0.43
LMO3-207ENST00000439600 HOMER2Q9NSB8 354 aa12.38□□□□□ -0.43
LMO3-207ENST00000439600 ADGRA2Q96PE1 1338 aa12.37□□□□□ -0.43
LMO3-207ENST00000439600 VPS37CA5D8V6 355 aaPredicted RBP12.37□□□□□ -0.43
LMO3-207ENST00000439600 SPDYE3A6NKU9 549 aa12.37□□□□□ -0.43
LMO3-207ENST00000439600 TBC1D8O95759 1140 aa12.37□□□□□ -0.43
LMO3-207ENST00000439600 HOXD10P28358 340 aa12.37□□□□□ -0.43
LMO3-207ENST00000439600 CTCFP49711 727 aaPredicted RBP12.37□□□□□ -0.43
LMO3-207ENST00000439600 PRR20EP86478 221 aa12.37□□□□□ -0.43
LMO3-207ENST00000439600 PRR20CP86479 221 aa12.37□□□□□ -0.43
LMO3-207ENST00000439600 PRR20DP86480 221 aa12.37□□□□□ -0.43
LMO3-207ENST00000439600 PRR20BP86481 221 aa12.37□□□□□ -0.43
LMO3-207ENST00000439600 PRR20AP86496 221 aa12.37□□□□□ -0.43
LMO3-207ENST00000439600 SP3Q02447 781 aa12.37□□□□□ -0.43
LMO3-207ENST00000439600 WDR78Q5VTH9 848 aa12.37□□□□□ -0.43
LMO3-207ENST00000439600 MCTP1Q6DN14 999 aa12.37□□□□□ -0.43
LMO3-207ENST00000439600 NSMFQ6X4W1 530 aa12.37□□□□□ -0.43
LMO3-207ENST00000439600 KRT25Q7Z3Z0 450 aa12.37□□□□□ -0.43
LMO3-207ENST00000439600 BRAPQ7Z569 592 aa12.37□□□□□ -0.43
LMO3-207ENST00000439600 PLEKHH3Q7Z736 793 aa12.37□□□□□ -0.43
LMO3-207ENST00000439600 DIS3L2Q8IYB7 885 aaKnown RBP12.37□□□□□ -0.43
LMO3-207ENST00000439600 CLEC4DQ8WXI8 215 aa12.37□□□□□ -0.43
LMO3-207ENST00000439600 AIFM3Q96NN9 605 aa12.37□□□□□ -0.43
LMO3-207ENST00000439600 NAP1L4Q99733 375 aaKnown RBP12.37□□□□□ -0.43
LMO3-207ENST00000439600 KLF16Q9BXK1 252 aaPredicted RBP12.37□□□□□ -0.43
LMO3-207ENST00000439600 TOR4AQ9NXH8 423 aa12.37□□□□□ -0.43
LMO3-207ENST00000439600 CHMP5Q9NZZ3 219 aa12.37□□□□□ -0.43
LMO3-207ENST00000439600 ADD3Q9UEY8 706 aaKnown RBP12.37□□□□□ -0.43
LMO3-207ENST00000439600 KCNJ14Q9UNX9 436 aa12.37□□□□□ -0.43
LMO3-207ENST00000439600 RIPK3Q9Y572 518 aa12.37□□□□□ -0.43
LMO3-207ENST00000439600 PHIPQ8WWQ0 1821 aa12.37□□□□□ -0.43
LMO3-207ENST00000439600 LOC102724159A0A0B4J2E5 919 aa12.36□□□□□ -0.43
LMO3-207ENST00000439600 CCDC194A0A1B0GVG4 234 aa12.36□□□□□ -0.43
LMO3-207ENST00000439600 SLC15A5A6NIM6 579 aa12.36□□□□□ -0.43
LMO3-207ENST00000439600 CCDC85CA6NKD9 419 aa12.36□□□□□ -0.43
LMO3-207ENST00000439600 U2AF2P26368 475 aaKnown RBP eCLIP12.36□□□□□ -0.43
LMO3-207ENST00000439600 HSD17B4P51659 736 aa12.36□□□□□ -0.43
LMO3-207ENST00000439600 SMTNP53814 917 aa12.36□□□□□ -0.43
LMO3-207ENST00000439600 FCGRTP55899 365 aa12.36□□□□□ -0.43
LMO3-207ENST00000439600 PWP2Q15269 919 aaKnown RBP12.36□□□□□ -0.43
LMO3-207ENST00000439600 MTFR1Q15390 333 aa12.36□□□□□ -0.43
LMO3-207ENST00000439600 DNERQ8NFT8 737 aa12.36□□□□□ -0.43
LMO3-207ENST00000439600 MMP19Q99542 508 aa12.36□□□□□ -0.43
LMO3-207ENST00000439600 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.36□□□□□ -0.43
LMO3-207ENST00000439600 SERTAD1Q9UHV2 236 aa12.36□□□□□ -0.43
LMO3-207ENST00000439600 MYH4Q9Y623 1939 aa12.35□□□□□ -0.43
LMO3-207ENST00000439600 SOWAHDA6NJG2 315 aa12.35□□□□□ -0.43
LMO3-207ENST00000439600 A6NJY4 79 aa12.35□□□□□ -0.43
LMO3-207ENST00000439600 BTBD18B2RXH4 712 aa12.35□□□□□ -0.43
LMO3-207ENST00000439600 GPR25O00155 361 aa12.35□□□□□ -0.43
LMO3-207ENST00000439600 MEIS2O14770 477 aa12.35□□□□□ -0.43
LMO3-207ENST00000439600 ZSCAN22P10073 491 aaPredicted RBP12.35□□□□□ -0.43
LMO3-207ENST00000439600 LBX1P52954 281 aa12.35□□□□□ -0.43
LMO3-207ENST00000439600 RPS6P62753 249 aaKnown RBP12.35□□□□□ -0.43
LMO3-207ENST00000439600 GUCY1B3Q02153 619 aa12.35□□□□□ -0.43
LMO3-207ENST00000439600 CLN3Q13286 438 aa12.35□□□□□ -0.43
LMO3-207ENST00000439600 BAATQ14032 418 aaPredicted RBP12.35□□□□□ -0.43
LMO3-207ENST00000439600 MUM1L1Q5H9M0 696 aa12.35□□□□□ -0.43
LMO3-207ENST00000439600 XRRA1Q6P2D8 792 aa12.35□□□□□ -0.43
LMO3-207ENST00000439600 GPR142Q7Z601 462 aa12.35□□□□□ -0.43
LMO3-207ENST00000439600 DPP9Q86TI2 863 aa12.35□□□□□ -0.43
LMO3-207ENST00000439600 NOSTRINQ8IVI9 506 aa12.35□□□□□ -0.43
LMO3-207ENST00000439600 NSUN6Q8TEA1 469 aaKnown RBP12.35□□□□□ -0.43
LMO3-207ENST00000439600 ERO1AQ96HE7 468 aa12.35□□□□□ -0.43
LMO3-207ENST00000439600 EFCC1Q9HA90 598 aa12.35□□□□□ -0.43
LMO3-207ENST00000439600 CYP39A1Q9NYL5 469 aa12.35□□□□□ -0.43
LMO3-207ENST00000439600 BIN2Q9UBW5 565 aaPredicted RBP12.35□□□□□ -0.43
LMO3-207ENST00000439600 NOL7Q9UMY1 257 aaKnown RBP12.35□□□□□ -0.43
LMO3-207ENST00000439600 DIS3Q9Y2L1 958 aaKnown RBP12.35□□□□□ -0.43
LMO3-207ENST00000439600 PDE4DIPQ5VU43 2346 aa12.35□□□□□ -0.43
LMO3-207ENST00000439600 LOC285556D6RIA3 1793 aa12.34□□□□□ -0.43
LMO3-207ENST00000439600 NFIBO00712 420 aa12.34□□□□□ -0.43
LMO3-207ENST00000439600 TNPO2O14787 897 aaKnown RBP12.34□□□□□ -0.43
LMO3-207ENST00000439600 FKTNO75072 461 aa12.34□□□□□ -0.43
LMO3-207ENST00000439600 TRAPPC10P48553 1259 aa12.34□□□□□ -0.43
LMO3-207ENST00000439600 USP11P51784 963 aa12.34□□□□□ -0.43
LMO3-207ENST00000439600 LACTBP83111 547 aaPredicted RBP12.34□□□□□ -0.43
LMO3-207ENST00000439600 FOXK2Q01167 660 aa12.34□□□□□ -0.43
LMO3-207ENST00000439600 NONOQ15233 471 aaKnown RBP eCLIP12.34□□□□□ -0.43
LMO3-207ENST00000439600 RILPL1Q5EBL4 403 aa12.34□□□□□ -0.43
LMO3-207ENST00000439600 ARHGEF16Q5VV41 709 aa12.34□□□□□ -0.43
LMO3-207ENST00000439600 ATL3Q6DD88 541 aa12.34□□□□□ -0.43
LMO3-207ENST00000439600 USP17L6PQ6QN14 398 aa12.34□□□□□ -0.43
LMO3-207ENST00000439600 SYTL5Q8TDW5 730 aaPredicted RBP12.34□□□□□ -0.43
LMO3-207ENST00000439600 SCG3Q8WXD2 468 aaKnown RBP12.34□□□□□ -0.43
LMO3-207ENST00000439600 SOCS4Q8WXH5 440 aa12.34□□□□□ -0.43
LMO3-207ENST00000439600 IWS1Q96ST2 819 aa12.34□□□□□ -0.43
LMO3-207ENST00000439600 PORCNQ9H237 461 aa12.34□□□□□ -0.43
LMO3-207ENST00000439600 A1CFQ9NQ94 594 aaKnown RBP12.34□□□□□ -0.43
LMO3-207ENST00000439600 SCHIP1Q9P0W5 487 aaPredicted RBP12.34□□□□□ -0.43
LMO3-207ENST00000439600 PCDHA6Q9UN73 950 aa12.34□□□□□ -0.43
LMO3-207ENST00000439600 MTMR6Q9Y217 621 aa12.34□□□□□ -0.43
LMO3-207ENST00000439600 PCDHA8Q9Y5H6 950 aa12.34□□□□□ -0.43
LMO3-207ENST00000439600 ASB14A6NK59 587 aa12.33□□□□□ -0.44
LMO3-207ENST00000439600 J3QL48 77 aa12.33□□□□□ -0.44
LMO3-207ENST00000439600 CDK2AP1O14519 115 aa12.33□□□□□ -0.44
LMO3-207ENST00000439600 OPLAHO14841 1288 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms