RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 DNAJC19Q96DA6 116 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 CEP63Q96MT8 703 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 KRT12Q99456 494 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 EYA3Q99504 573 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 NUDT12Q9BQG2 462 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 POTEMA6NI47 508 aa16.78■□□□□ 0.28
CDC42EP4-202ENST00000439510 MEFVO15553 781 aaPredicted RBP16.78■□□□□ 0.28
CDC42EP4-202ENST00000439510 ADRA2BP18089 450 aa16.78■□□□□ 0.28
CDC42EP4-202ENST00000439510 HNRNPH1P31943 449 aaKnown RBP16.78■□□□□ 0.28
CDC42EP4-202ENST00000439510 HSPA9P38646 679 aaKnown RBP16.78■□□□□ 0.28
CDC42EP4-202ENST00000439510 KRT79Q5XKE5 535 aa16.78■□□□□ 0.28
CDC42EP4-202ENST00000439510 KCNV1Q6PIU1 500 aa16.78■□□□□ 0.28
CDC42EP4-202ENST00000439510 C16orf86Q6ZW13 317 aa16.78■□□□□ 0.28
CDC42EP4-202ENST00000439510 SNX29Q8TEQ0 813 aa16.78■□□□□ 0.28
CDC42EP4-202ENST00000439510 ATP6V1G3Q96LB4 118 aa16.78■□□□□ 0.28
CDC42EP4-202ENST00000439510 RIOX1Q9H6W3 641 aa16.78■□□□□ 0.28
CDC42EP4-202ENST00000439510 MYH7BA7E2Y1 1941 aa16.78■□□□□ 0.28
CDC42EP4-202ENST00000439510 BTNL10A8MVZ5 291 aa16.78■□□□□ 0.28
CDC42EP4-202ENST00000439510 HMGB1P1B2RPK0 211 aaPredicted RBP16.78■□□□□ 0.28
CDC42EP4-202ENST00000439510 FSBPO95073 299 aa16.78■□□□□ 0.28
CDC42EP4-202ENST00000439510 NOVP48745 357 aa16.78■□□□□ 0.28
CDC42EP4-202ENST00000439510 COASYQ13057 564 aa16.78■□□□□ 0.28
CDC42EP4-202ENST00000439510 USP38Q8NB14 1042 aa16.78■□□□□ 0.28
CDC42EP4-202ENST00000439510 NLRP3Q96P20 1036 aa16.78■□□□□ 0.28
CDC42EP4-202ENST00000439510 CAMKK2Q96RR4 588 aa16.78■□□□□ 0.28
CDC42EP4-202ENST00000439510 LSM14BQ9BX40 385 aaKnown RBP16.78■□□□□ 0.28
CDC42EP4-202ENST00000439510 AIPL1Q9NZN9 384 aa16.78■□□□□ 0.28
CDC42EP4-202ENST00000439510 PPP1R37O75864 691 aa16.77■□□□□ 0.28
CDC42EP4-202ENST00000439510 TDP2O95551 362 aa16.77■□□□□ 0.28
CDC42EP4-202ENST00000439510 GNA14O95837 355 aa16.77■□□□□ 0.28
CDC42EP4-202ENST00000439510 CDK8P49336 464 aa16.77■□□□□ 0.28
CDC42EP4-202ENST00000439510 FNTAP49354 379 aa16.77■□□□□ 0.28
CDC42EP4-202ENST00000439510 POLR2FP61218 127 aaKnown RBP16.77■□□□□ 0.28
CDC42EP4-202ENST00000439510 PTGISQ16647 500 aa16.77■□□□□ 0.28
CDC42EP4-202ENST00000439510 NAA35Q5VZE5 725 aa16.77■□□□□ 0.28
CDC42EP4-202ENST00000439510 TPTE2Q6XPS3 522 aa16.77■□□□□ 0.28
CDC42EP4-202ENST00000439510 TRIM59Q8IWR1 403 aa16.77■□□□□ 0.28
CDC42EP4-202ENST00000439510 TBC1D5Q92609 795 aa16.77■□□□□ 0.28
CDC42EP4-202ENST00000439510 TNRC6CQ9HCJ0 1690 aaKnown RBP16.77■□□□□ 0.28
CDC42EP4-202ENST00000439510 TRAF5O00463 557 aa16.77■□□□□ 0.27
CDC42EP4-202ENST00000439510 GUCY2FP51841 1108 aa16.77■□□□□ 0.27
CDC42EP4-202ENST00000439510 TNNC1P63316 161 aa16.77■□□□□ 0.27
CDC42EP4-202ENST00000439510 GUCY1A3Q02108 690 aa16.77■□□□□ 0.27
CDC42EP4-202ENST00000439510 DIXDC1Q155Q3 683 aa16.77■□□□□ 0.27
CDC42EP4-202ENST00000439510 CCDC40Q4G0X9 1142 aa16.77■□□□□ 0.27
CDC42EP4-202ENST00000439510 FBXW10Q5XX13 1052 aa16.77■□□□□ 0.27
CDC42EP4-202ENST00000439510 SLC51AQ86UW1 340 aa16.77■□□□□ 0.27
CDC42EP4-202ENST00000439510 NYXQ9GZU5 481 aa16.77■□□□□ 0.27
CDC42EP4-202ENST00000439510 GGA2Q9UJY4 613 aa16.77■□□□□ 0.27
CDC42EP4-202ENST00000439510 A0A087X0T9 212 aa16.76■□□□□ 0.27
CDC42EP4-202ENST00000439510 FAM228BP0C875 321 aa16.76■□□□□ 0.27
CDC42EP4-202ENST00000439510 ITGB3BPQ13352 177 aaPredicted RBP16.76■□□□□ 0.27
CDC42EP4-202ENST00000439510 MICALCLQ6ZW33 695 aa16.76■□□□□ 0.27
CDC42EP4-202ENST00000439510 PDGFDQ9GZP0 370 aaPredicted RBP16.76■□□□□ 0.27
CDC42EP4-202ENST00000439510 SAP30BPQ9UHR5 308 aaKnown RBP16.76■□□□□ 0.27
CDC42EP4-202ENST00000439510 RAD51CO43502 376 aa16.76■□□□□ 0.27
CDC42EP4-202ENST00000439510 KIAA0754O94854 1291 aa16.76■□□□□ 0.27
CDC42EP4-202ENST00000439510 MDH1P40925 334 aaKnown RBP16.76■□□□□ 0.27
CDC42EP4-202ENST00000439510 KIAA0753Q2KHM9 967 aa16.76■□□□□ 0.27
CDC42EP4-202ENST00000439510 LRIG3Q6UXM1 1119 aa16.76■□□□□ 0.27
CDC42EP4-202ENST00000439510 MAPKAPK5Q8IW41 473 aa16.76■□□□□ 0.27
CDC42EP4-202ENST00000439510 ISCUQ9H1K1 167 aa16.76■□□□□ 0.27
CDC42EP4-202ENST00000439510 TAF1DQ9H5J8 278 aaPredicted RBP16.76■□□□□ 0.27
CDC42EP4-202ENST00000439510 VAT1LQ9HCJ6 419 aa16.76■□□□□ 0.27
CDC42EP4-202ENST00000439510 PLCB1Q9NQ66 1216 aa16.76■□□□□ 0.27
CDC42EP4-202ENST00000439510 USP8P40818 1118 aa16.75■□□□□ 0.27
CDC42EP4-202ENST00000439510 GRIK5Q16478 980 aa16.75■□□□□ 0.27
CDC42EP4-202ENST00000439510 ECM1Q16610 540 aa16.75■□□□□ 0.27
CDC42EP4-202ENST00000439510 FAM26FQ5R3K3 315 aa16.75■□□□□ 0.27
CDC42EP4-202ENST00000439510 ZC3H3Q8IXZ2 948 aaKnown RBP16.75■□□□□ 0.27
CDC42EP4-202ENST00000439510 OTUD6BQ8N6M0 293 aa16.75■□□□□ 0.27
CDC42EP4-202ENST00000439510 CNBD1Q8NA66 436 aa16.75■□□□□ 0.27
CDC42EP4-202ENST00000439510 ZNF473Q8WTR7 871 aaKnown RBP16.75■□□□□ 0.27
CDC42EP4-202ENST00000439510 BHMG1C9JSJ3 638 aaPredicted RBP16.75■□□□□ 0.27
CDC42EP4-202ENST00000439510 ADCY7P51828 1080 aa16.75■□□□□ 0.27
CDC42EP4-202ENST00000439510 DDR1Q08345 913 aa16.75■□□□□ 0.27
CDC42EP4-202ENST00000439510 TRADDQ15628 312 aa16.75■□□□□ 0.27
CDC42EP4-202ENST00000439510 PPP4R3AQ6IN85 833 aa16.75■□□□□ 0.27
CDC42EP4-202ENST00000439510 CERS3Q8IU89 383 aa16.75■□□□□ 0.27
CDC42EP4-202ENST00000439510 CEP95Q96GE4 821 aa16.75■□□□□ 0.27
CDC42EP4-202ENST00000439510 RTFDC1Q9BY42 306 aaPredicted RBP16.75■□□□□ 0.27
CDC42EP4-202ENST00000439510 GANQ9H2C0 597 aa16.75■□□□□ 0.27
CDC42EP4-202ENST00000439510 PACSIN2Q9UNF0 486 aaPredicted RBP16.75■□□□□ 0.27
CDC42EP4-202ENST00000439510 PLAAQ9Y263 795 aa16.75■□□□□ 0.27
CDC42EP4-202ENST00000439510 LDHCP07864 332 aa16.75■□□□□ 0.27
CDC42EP4-202ENST00000439510 ECHS1P30084 290 aa16.75■□□□□ 0.27
CDC42EP4-202ENST00000439510 IRX3P78415 501 aaPredicted RBP16.75■□□□□ 0.27
CDC42EP4-202ENST00000439510 PACSIN1Q9BY11 444 aa16.75■□□□□ 0.27
CDC42EP4-202ENST00000439510 TMBIM4Q9HC24 238 aa16.75■□□□□ 0.27
CDC42EP4-202ENST00000439510 PANK4Q9NVE7 773 aa16.75■□□□□ 0.27
CDC42EP4-202ENST00000439510 GEMIN8Q9NWZ8 242 aaKnown RBP16.75■□□□□ 0.27
CDC42EP4-202ENST00000439510 PCDHA2Q9Y5H9 948 aa16.75■□□□□ 0.27
CDC42EP4-202ENST00000439510 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.75■□□□□ 0.27
CDC42EP4-202ENST00000439510 USP17L5A8MUK1 530 aa16.74■□□□□ 0.27
CDC42EP4-202ENST00000439510 TM4SF1P30408 202 aa16.74■□□□□ 0.27
CDC42EP4-202ENST00000439510 DNA2P51530 1060 aa16.74■□□□□ 0.27
CDC42EP4-202ENST00000439510 KLHL30Q0D2K2 578 aa16.74■□□□□ 0.27
CDC42EP4-202ENST00000439510 CUL1Q13616 776 aa16.74■□□□□ 0.27
CDC42EP4-202ENST00000439510 RAPGEF1Q13905 1077 aa16.74■□□□□ 0.27
CDC42EP4-202ENST00000439510 HYIQ5T013 277 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms