RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 AENQ8WTP8 325 aaKnown RBP17.24■□□□□ 0.35
DHFR-201ENST00000439211 GGT7Q9UJ14 662 aa17.24■□□□□ 0.35
DHFR-201ENST00000439211 ZNF804BA4D1E1 1349 aa17.24■□□□□ 0.35
DHFR-201ENST00000439211 FAM170AA1A519 330 aa17.24■□□□□ 0.35
DHFR-201ENST00000439211 BUB1O43683 1085 aa17.24■□□□□ 0.35
DHFR-201ENST00000439211 LRRC41Q15345 812 aa17.24■□□□□ 0.35
DHFR-201ENST00000439211 KRT79Q5XKE5 535 aa17.24■□□□□ 0.35
DHFR-201ENST00000439211 SH3RF1Q7Z6J0 888 aa17.24■□□□□ 0.35
DHFR-201ENST00000439211 LONP2Q86WA8 852 aa17.24■□□□□ 0.35
DHFR-201ENST00000439211 KLHL7Q8IXQ5 586 aa17.24■□□□□ 0.35
DHFR-201ENST00000439211 SPATA4Q8NEY3 305 aa17.24■□□□□ 0.35
DHFR-201ENST00000439211 AGAP11Q8TF27 550 aa17.24■□□□□ 0.35
DHFR-201ENST00000439211 ABCC6O95255 1503 aa17.24■□□□□ 0.35
DHFR-201ENST00000439211 hCG_2014768A0A024R1R8 64 aa17.23■□□□□ 0.35
DHFR-201ENST00000439211 CETN3O15182 167 aa17.23■□□□□ 0.35
DHFR-201ENST00000439211 ATP4AP20648 1035 aa17.23■□□□□ 0.35
DHFR-201ENST00000439211 TSNAXIP1Q2TAA8 658 aa17.23■□□□□ 0.35
DHFR-201ENST00000439211 FAM182BQ5T319 152 aa17.23■□□□□ 0.35
DHFR-201ENST00000439211 PDXDC2PQ6P474 469 aa17.23■□□□□ 0.35
DHFR-201ENST00000439211 TLDC1Q6P9B6 456 aa17.23■□□□□ 0.35
DHFR-201ENST00000439211 ADSSL1Q8N142 457 aa17.23■□□□□ 0.35
DHFR-201ENST00000439211 LUC7LQ9NQ29 371 aaKnown RBP17.23■□□□□ 0.35
DHFR-201ENST00000439211 LEMD3Q9Y2U8 911 aa17.23■□□□□ 0.35
DHFR-201ENST00000439211 CD2APQ9Y5K6 639 aa17.23■□□□□ 0.35
DHFR-201ENST00000439211 DUSP10Q9Y6W6 482 aa17.23■□□□□ 0.35
DHFR-201ENST00000439211 FAM205AQ6ZU69 1335 aa17.23■□□□□ 0.35
DHFR-201ENST00000439211 C6orf229H3BNL8 230 aa17.23■□□□□ 0.35
DHFR-201ENST00000439211 ATRNO75882 1429 aa17.23■□□□□ 0.35
DHFR-201ENST00000439211 FRMPD2Q68DX3 1309 aaPredicted RBP17.23■□□□□ 0.35
DHFR-201ENST00000439211 CEP128Q6ZU80 1094 aa17.23■□□□□ 0.35
DHFR-201ENST00000439211 EYA3Q99504 573 aa17.23■□□□□ 0.35
DHFR-201ENST00000439211 NSRP1Q9H0G5 558 aaKnown RBP17.23■□□□□ 0.35
DHFR-201ENST00000439211 GBP1P32455 592 aa17.23■□□□□ 0.35
DHFR-201ENST00000439211 REXO1Q8N1G1 1221 aaKnown RBP17.23■□□□□ 0.35
DHFR-201ENST00000439211 USH1CQ9Y6N9 552 aa17.23■□□□□ 0.35
DHFR-201ENST00000439211 ITIH6Q6UXX5 1313 aa17.22■□□□□ 0.35
DHFR-201ENST00000439211 ATP2A2P16615 1042 aaKnown RBP17.22■□□□□ 0.35
DHFR-201ENST00000439211 NELFCDQ8IXH7 590 aa17.22■□□□□ 0.35
DHFR-201ENST00000439211 SH3RF3Q8TEJ3 882 aaPredicted RBP17.22■□□□□ 0.35
DHFR-201ENST00000439211 SNX29Q8TEQ0 813 aa17.22■□□□□ 0.35
DHFR-201ENST00000439211 SHISA4Q96DD7 197 aa17.22■□□□□ 0.35
DHFR-201ENST00000439211 EPAS1Q99814 870 aa17.22■□□□□ 0.35
DHFR-201ENST00000439211 AMPD2Q01433 879 aa17.22■□□□□ 0.35
DHFR-201ENST00000439211 PTPROQ16827 1216 aa17.22■□□□□ 0.35
DHFR-201ENST00000439211 GLE1Q53GS7 698 aaKnown RBP17.22■□□□□ 0.35
DHFR-201ENST00000439211 MFSD4BQ5TF39 518 aa17.22■□□□□ 0.35
DHFR-201ENST00000439211 KRT25Q7Z3Z0 450 aa17.22■□□□□ 0.35
DHFR-201ENST00000439211 NEK8Q86SG6 692 aa17.22■□□□□ 0.35
DHFR-201ENST00000439211 TBCKQ8TEA7 893 aa17.22■□□□□ 0.35
DHFR-201ENST00000439211 ELAC2Q9BQ52 826 aaKnown RBP17.22■□□□□ 0.35
DHFR-201ENST00000439211 PYGBP11216 843 aa17.22■□□□□ 0.35
DHFR-201ENST00000439211 STK4Q13043 487 aa17.22■□□□□ 0.35
DHFR-201ENST00000439211 PPP4R3AQ6IN85 833 aa17.22■□□□□ 0.35
DHFR-201ENST00000439211 RNF10Q8N5U6 811 aaKnown RBP17.22■□□□□ 0.35
DHFR-201ENST00000439211 TAF4BQ92750 862 aa17.22■□□□□ 0.35
DHFR-201ENST00000439211 GBP5Q96PP8 586 aa17.22■□□□□ 0.35
DHFR-201ENST00000439211 PSMD14O00487 310 aa17.21■□□□□ 0.35
DHFR-201ENST00000439211 SMNDC1O75940 238 aaKnown RBP eCLIP17.21■□□□□ 0.35
DHFR-201ENST00000439211 CCNE1P24864 410 aa17.21■□□□□ 0.35
DHFR-201ENST00000439211 CARSP49589 748 aaKnown RBP17.21■□□□□ 0.35
DHFR-201ENST00000439211 GSTO1P78417 241 aa17.21■□□□□ 0.35
DHFR-201ENST00000439211 CALCRLQ16602 461 aa17.21■□□□□ 0.35
DHFR-201ENST00000439211 TCERG1LQ5VWI1 586 aa17.21■□□□□ 0.35
DHFR-201ENST00000439211 CDCA2Q69YH5 1023 aaPredicted RBP17.21■□□□□ 0.35
DHFR-201ENST00000439211 ANKRD40Q6AI12 368 aa17.21■□□□□ 0.35
DHFR-201ENST00000439211 P3H4Q92791 437 aa17.21■□□□□ 0.35
DHFR-201ENST00000439211 MTRQ99707 1265 aa17.21■□□□□ 0.35
DHFR-201ENST00000439211 THAP9Q9H5L6 903 aa17.21■□□□□ 0.35
DHFR-201ENST00000439211 LMTK3Q96Q04 1460 aa17.21■□□□□ 0.35
DHFR-201ENST00000439211 PDE2AO00408 941 aaPredicted RBP17.21■□□□□ 0.35
DHFR-201ENST00000439211 MOCS3O95396 460 aa17.21■□□□□ 0.35
DHFR-201ENST00000439211 IFNAR2P48551 515 aa17.21■□□□□ 0.35
DHFR-201ENST00000439211 SCNN1BP51168 640 aa17.21■□□□□ 0.35
DHFR-201ENST00000439211 ZBED6P86452 979 aa17.21■□□□□ 0.35
DHFR-201ENST00000439211 IL17AQ16552 155 aa17.21■□□□□ 0.35
DHFR-201ENST00000439211 DHTKD1Q96HY7 919 aaPredicted RBP17.21■□□□□ 0.35
DHFR-201ENST00000439211 NYXQ9GZU5 481 aa17.21■□□□□ 0.35
DHFR-201ENST00000439211 ADAMTS3O15072 1205 aa17.21■□□□□ 0.35
DHFR-201ENST00000439211 FESP07332 822 aa17.21■□□□□ 0.35
DHFR-201ENST00000439211 FUT2Q10981 343 aa17.21■□□□□ 0.35
DHFR-201ENST00000439211 APTXQ7Z2E3 356 aaKnown RBP17.21■□□□□ 0.35
DHFR-201ENST00000439211 OR2W6PQ8NHA6 318 aa17.21■□□□□ 0.35
DHFR-201ENST00000439211 LACRTQ9GZZ8 138 aa17.21■□□□□ 0.35
DHFR-201ENST00000439211 HYOU1Q9Y4L1 999 aa17.21■□□□□ 0.35
DHFR-201ENST00000439211 ORC4O43929 436 aa17.2■□□□□ 0.34
DHFR-201ENST00000439211 MUM1Q2TAK8 710 aa17.2■□□□□ 0.34
DHFR-201ENST00000439211 RPGRQ92834 1020 aaKnown RBP17.2■□□□□ 0.34
DHFR-201ENST00000439211 C2CD2Q9Y426 696 aa17.2■□□□□ 0.34
DHFR-201ENST00000439211 CCT8L1PA6NM43 557 aa17.2■□□□□ 0.34
DHFR-201ENST00000439211 SESN3P58005 492 aa17.2■□□□□ 0.34
DHFR-201ENST00000439211 CFAP221Q4G0U5 840 aa17.2■□□□□ 0.34
DHFR-201ENST00000439211 KIF2BQ8N4N8 673 aa17.2■□□□□ 0.34
DHFR-201ENST00000439211 PIGSQ96S52 555 aa17.2■□□□□ 0.34
DHFR-201ENST00000439211 TMEM47Q9BQJ4 181 aa17.2■□□□□ 0.34
DHFR-201ENST00000439211 MLXIPQ9HAP2 919 aa17.2■□□□□ 0.34
DHFR-201ENST00000439211 EHD2Q9NZN4 543 aa17.2■□□□□ 0.34
DHFR-201ENST00000439211 PCDHA6Q9UN73 950 aa17.2■□□□□ 0.34
DHFR-201ENST00000439211 PCDHA8Q9Y5H6 950 aa17.2■□□□□ 0.34
DHFR-201ENST00000439211 TCP1P17987 556 aaKnown RBP17.2■□□□□ 0.34
DHFR-201ENST00000439211 RFC4P35249 363 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms