RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 FOSP01100 380 aaPredicted RBP13.39□□□□□ -0.27
HDAC8-214ENST00000439122 ZNF76P36508 570 aa13.39□□□□□ -0.27
HDAC8-214ENST00000439122 EPS15P42566 896 aa13.39□□□□□ -0.27
HDAC8-214ENST00000439122 GFPT1Q06210 699 aaPredicted RBP13.39□□□□□ -0.27
HDAC8-214ENST00000439122 RRP1BQ14684 758 aaKnown RBP13.39□□□□□ -0.27
HDAC8-214ENST00000439122 LSM14BQ9BX40 385 aaKnown RBP13.39□□□□□ -0.27
HDAC8-214ENST00000439122 JRKLQ9Y4A0 524 aa13.39□□□□□ -0.27
HDAC8-214ENST00000439122 A0A1W2PRG0 241 aa13.39□□□□□ -0.27
HDAC8-214ENST00000439122 ENTPD3O75355 529 aa13.39□□□□□ -0.27
HDAC8-214ENST00000439122 LCA5LO95447 670 aa13.39□□□□□ -0.27
HDAC8-214ENST00000439122 SPATA31C1P0DKV0 1188 aa13.39□□□□□ -0.27
HDAC8-214ENST00000439122 RPA1P27694 616 aa13.39□□□□□ -0.27
HDAC8-214ENST00000439122 MAGEA1P43355 309 aa13.39□□□□□ -0.27
HDAC8-214ENST00000439122 CASP5P51878 434 aa13.39□□□□□ -0.27
HDAC8-214ENST00000439122 USP14P54578 494 aa13.39□□□□□ -0.27
HDAC8-214ENST00000439122 POLR2FP61218 127 aaKnown RBP13.39□□□□□ -0.27
HDAC8-214ENST00000439122 FAM193AP78312 1265 aa13.39□□□□□ -0.27
HDAC8-214ENST00000439122 CYP4A11Q02928 519 aa13.39□□□□□ -0.27
HDAC8-214ENST00000439122 FAM83BQ5T0W9 1011 aa13.39□□□□□ -0.27
HDAC8-214ENST00000439122 CC2D2BQ6DHV5 1058 aa13.39□□□□□ -0.27
HDAC8-214ENST00000439122 CYP2W1Q8TAV3 490 aa13.39□□□□□ -0.27
HDAC8-214ENST00000439122 RPGRIP1Q96KN7 1286 aa13.39□□□□□ -0.27
HDAC8-214ENST00000439122 EDEM3Q9BZQ6 932 aa13.39□□□□□ -0.27
HDAC8-214ENST00000439122 PDE11AQ9HCR9 933 aa13.39□□□□□ -0.27
HDAC8-214ENST00000439122 CEP72Q9P209 647 aa13.39□□□□□ -0.27
HDAC8-214ENST00000439122 FRMD3A2A2Y4 597 aa13.38□□□□□ -0.27
HDAC8-214ENST00000439122 ERICH4A6NGS2 130 aa13.38□□□□□ -0.27
HDAC8-214ENST00000439122 MSH4O15457 936 aa13.38□□□□□ -0.27
HDAC8-214ENST00000439122 NOL4O94818 638 aa13.38□□□□□ -0.27
HDAC8-214ENST00000439122 NR2F2P24468 414 aa13.38□□□□□ -0.27
HDAC8-214ENST00000439122 GPS2Q13227 327 aa13.38□□□□□ -0.27
HDAC8-214ENST00000439122 GIT2Q14161 759 aa13.38□□□□□ -0.27
HDAC8-214ENST00000439122 WDR93Q6P2C0 686 aa13.38□□□□□ -0.27
HDAC8-214ENST00000439122 TRIM59Q8IWR1 403 aa13.38□□□□□ -0.27
HDAC8-214ENST00000439122 ANKRD13CQ8N6S4 541 aa13.38□□□□□ -0.27
HDAC8-214ENST00000439122 CNKSR1Q969H4 720 aa13.38□□□□□ -0.27
HDAC8-214ENST00000439122 FAM20AQ96MK3 541 aa13.38□□□□□ -0.27
HDAC8-214ENST00000439122 REEP2Q9BRK0 252 aa13.38□□□□□ -0.27
HDAC8-214ENST00000439122 PRR12Q9ULL5 1215 aa13.38□□□□□ -0.27
HDAC8-214ENST00000439122 ATRNL1Q5VV63 1379 aa13.38□□□□□ -0.27
HDAC8-214ENST00000439122 MYH10P35580 1976 aa13.38□□□□□ -0.27
HDAC8-214ENST00000439122 TCP10L2B9ZVM9 353 aa13.38□□□□□ -0.27
HDAC8-214ENST00000439122 OPLAHO14841 1288 aa13.38□□□□□ -0.27
HDAC8-214ENST00000439122 CETN3O15182 167 aa13.38□□□□□ -0.27
HDAC8-214ENST00000439122 APBA1Q02410 837 aa13.38□□□□□ -0.27
HDAC8-214ENST00000439122 RASSF7Q02833 373 aa13.38□□□□□ -0.27
HDAC8-214ENST00000439122 SLC9C1Q4G0N8 1177 aa13.38□□□□□ -0.27
HDAC8-214ENST00000439122 SFMBT2Q5VUG0 894 aa13.38□□□□□ -0.27
HDAC8-214ENST00000439122 HGSNATQ68CP4 663 aa13.38□□□□□ -0.27
HDAC8-214ENST00000439122 SYT2Q8N9I0 419 aaPredicted RBP13.38□□□□□ -0.27
HDAC8-214ENST00000439122 PKNOX2Q96KN3 472 aa13.38□□□□□ -0.27
HDAC8-214ENST00000439122 ALS2CR12Q96Q35 445 aa13.38□□□□□ -0.27
HDAC8-214ENST00000439122 NUCKS1Q9H1E3 243 aaKnown RBP13.38□□□□□ -0.27
HDAC8-214ENST00000439122 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.38□□□□□ -0.27
HDAC8-214ENST00000439122 SNX12Q9UMY4 172 aa13.38□□□□□ -0.27
HDAC8-214ENST00000439122 SSU72P8A0A1W2PR75 194 aa13.37□□□□□ -0.27
HDAC8-214ENST00000439122 H3BQF6 201 aa13.37□□□□□ -0.27
HDAC8-214ENST00000439122 PDE2AO00408 941 aaPredicted RBP13.37□□□□□ -0.27
HDAC8-214ENST00000439122 PPIP5K2O43314 1243 aa13.37□□□□□ -0.27
HDAC8-214ENST00000439122 EIF3JO75822 258 aaKnown RBP13.37□□□□□ -0.27
HDAC8-214ENST00000439122 ECE1P42892 770 aa13.37□□□□□ -0.27
HDAC8-214ENST00000439122 STAT2P52630 851 aa13.37□□□□□ -0.27
HDAC8-214ENST00000439122 MARSP56192 900 aaKnown RBP13.37□□□□□ -0.27
HDAC8-214ENST00000439122 ARID5AQ03989 594 aa13.37□□□□□ -0.27
HDAC8-214ENST00000439122 CASP8Q14790 479 aa13.37□□□□□ -0.27
HDAC8-214ENST00000439122 ASTE1Q2TB18 679 aaPredicted RBP13.37□□□□□ -0.27
HDAC8-214ENST00000439122 EDRF1Q3B7T1 1238 aa13.37□□□□□ -0.27
HDAC8-214ENST00000439122 PPP4R3CPQ6ZMV5 832 aa13.37□□□□□ -0.27
HDAC8-214ENST00000439122 SFR1Q86XK3 245 aa13.37□□□□□ -0.27
HDAC8-214ENST00000439122 FAM184BQ9ULE4 1060 aa13.37□□□□□ -0.27
HDAC8-214ENST00000439122 YDJCA8MPS7 323 aa13.36□□□□□ -0.27
HDAC8-214ENST00000439122 MMP14P50281 582 aa13.36□□□□□ -0.27
HDAC8-214ENST00000439122 NAP1L1P55209 391 aaKnown RBP13.36□□□□□ -0.27
HDAC8-214ENST00000439122 MAPK8IP2Q13387 824 aaPredicted RBP13.36□□□□□ -0.27
HDAC8-214ENST00000439122 IQCEQ6IPM2 695 aa13.36□□□□□ -0.27
HDAC8-214ENST00000439122 BTNL9Q6UXG8 535 aa13.36□□□□□ -0.27
HDAC8-214ENST00000439122 ARHGAP27Q6ZUM4 889 aa13.36□□□□□ -0.27
HDAC8-214ENST00000439122 PSMB7Q99436 277 aa13.36□□□□□ -0.27
HDAC8-214ENST00000439122 BHMT2Q9H2M3 363 aa13.36□□□□□ -0.27
HDAC8-214ENST00000439122 POLD4Q9HCU8 107 aa13.36□□□□□ -0.27
HDAC8-214ENST00000439122 SMCHD1A6NHR9 2005 aa13.36□□□□□ -0.27
HDAC8-214ENST00000439122 CLRN2A0PK11 232 aa13.36□□□□□ -0.27
HDAC8-214ENST00000439122 TLR2O60603 784 aa13.36□□□□□ -0.27
HDAC8-214ENST00000439122 CFBP00751 764 aa13.36□□□□□ -0.27
HDAC8-214ENST00000439122 SERPING1P05155 500 aa13.36□□□□□ -0.27
HDAC8-214ENST00000439122 MCM3P25205 808 aa13.36□□□□□ -0.27
HDAC8-214ENST00000439122 CIITAP33076 1130 aa13.36□□□□□ -0.27
HDAC8-214ENST00000439122 GYS2P54840 703 aa13.36□□□□□ -0.27
HDAC8-214ENST00000439122 C2orf54Q08AI8 447 aa13.36□□□□□ -0.27
HDAC8-214ENST00000439122 KCNH2Q12809 1159 aa13.36□□□□□ -0.27
HDAC8-214ENST00000439122 RAPGEF1Q13905 1077 aa13.36□□□□□ -0.27
HDAC8-214ENST00000439122 ENOX2Q16206 610 aaKnown RBP13.36□□□□□ -0.27
HDAC8-214ENST00000439122 KNOP1Q1ED39 458 aaKnown RBP13.36□□□□□ -0.27
HDAC8-214ENST00000439122 TXLNBQ8N3L3 684 aa13.36□□□□□ -0.27
HDAC8-214ENST00000439122 SYN2Q92777 582 aaPredicted RBP13.36□□□□□ -0.27
HDAC8-214ENST00000439122 ARHGEF10LQ9HCE6 1279 aa13.36□□□□□ -0.27
HDAC8-214ENST00000439122 RGL1Q9NZL6 768 aa13.36□□□□□ -0.27
HDAC8-214ENST00000439122 TMOD2Q9NZR1 351 aa13.36□□□□□ -0.27
HDAC8-214ENST00000439122 SALL4Q9UJQ4 1053 aa13.36□□□□□ -0.27
HDAC8-214ENST00000439122 VAV3Q9UKW4 847 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms