RNA–Protein interactions for RNA: ENST00000434278.5

LMBR1-208, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-208ENST00000434278 ZNF215Q9UL58 517 aaPredicted RBP23.08■■□□□ 1.29
LMBR1-208ENST00000434278 CDH23Q9H251 3354 aa23.07■■□□□ 1.28
LMBR1-208ENST00000434278 TREHO43280 583 aa23.07■■□□□ 1.28
LMBR1-208ENST00000434278 NBNO60934 754 aa23.07■■□□□ 1.28
LMBR1-208ENST00000434278 RABGGTBP53611 331 aa23.07■■□□□ 1.28
LMBR1-208ENST00000434278 ARHGAP4P98171 946 aa23.07■■□□□ 1.28
LMBR1-208ENST00000434278 AKAP17AQ02040 695 aaKnown RBP23.07■■□□□ 1.28
LMBR1-208ENST00000434278 GRIN2CQ14957 1233 aa23.07■■□□□ 1.28
LMBR1-208ENST00000434278 CCDC12Q8WUD4 166 aaPredicted RBP23.07■■□□□ 1.28
LMBR1-208ENST00000434278 ZNF274Q96GC6 653 aaPredicted RBP23.07■■□□□ 1.28
LMBR1-208ENST00000434278 PDRG1Q9NUG6 133 aa23.07■■□□□ 1.28
LMBR1-208ENST00000434278 YBX2Q9Y2T7 364 aaKnown RBP23.07■■□□□ 1.28
LMBR1-208ENST00000434278 MEIS1O00470 390 aa23.06■■□□□ 1.28
LMBR1-208ENST00000434278 CXCL10P02778 98 aa23.06■■□□□ 1.28
LMBR1-208ENST00000434278 MBTPS1Q14703 1052 aa23.06■■□□□ 1.28
LMBR1-208ENST00000434278 RAB30Q15771 203 aa23.06■■□□□ 1.28
LMBR1-208ENST00000434278 CRYGNQ8WXF5 182 aa23.06■■□□□ 1.28
LMBR1-208ENST00000434278 AGO4Q9HCK5 861 aaKnown RBP23.06■■□□□ 1.28
LMBR1-208ENST00000434278 JPH1Q9HDC5 661 aaPredicted RBP23.06■■□□□ 1.28
LMBR1-208ENST00000434278 MSRAQ9UJ68 235 aa23.06■■□□□ 1.28
LMBR1-208ENST00000434278 ATP2A2P16615 1042 aaKnown RBP23.05■■□□□ 1.28
LMBR1-208ENST00000434278 ADAM17P78536 824 aa23.05■■□□□ 1.28
LMBR1-208ENST00000434278 ITGB3BPQ13352 177 aaPredicted RBP23.05■■□□□ 1.28
LMBR1-208ENST00000434278 TCTN1Q2MV58 587 aa23.05■■□□□ 1.28
LMBR1-208ENST00000434278 REXO1Q8N1G1 1221 aaKnown RBP23.05■■□□□ 1.28
LMBR1-208ENST00000434278 NKX2-4Q9H2Z4 354 aa23.05■■□□□ 1.28
LMBR1-208ENST00000434278 VPS54Q9P1Q0 977 aa23.05■■□□□ 1.28
LMBR1-208ENST00000434278 NFASCO94856 1347 aa23.05■■□□□ 1.28
LMBR1-208ENST00000434278 FAM86B1E9PN63 330 aa23.04■■□□□ 1.28
LMBR1-208ENST00000434278 PARNO95453 639 aaKnown RBP23.04■■□□□ 1.28
LMBR1-208ENST00000434278 FAM86B2P0C5J1 330 aa23.04■■□□□ 1.28
LMBR1-208ENST00000434278 MYOGP15173 224 aa23.04■■□□□ 1.28
LMBR1-208ENST00000434278 GNA11P29992 359 aa23.04■■□□□ 1.28
LMBR1-208ENST00000434278 ZNF76P36508 570 aa23.04■■□□□ 1.28
LMBR1-208ENST00000434278 THPOP40225 353 aa23.04■■□□□ 1.28
LMBR1-208ENST00000434278 STK3Q13188 491 aa23.04■■□□□ 1.28
LMBR1-208ENST00000434278 RASGRP4Q8TDF6 673 aa23.04■■□□□ 1.28
LMBR1-208ENST00000434278 LMBR1Q8WVP7 490 aa23.04■■□□□ 1.28
LMBR1-208ENST00000434278 PCYT2Q99447 389 aa23.04■■□□□ 1.28
LMBR1-208ENST00000434278 SLC9A2Q9UBY0 812 aa23.04■■□□□ 1.28
LMBR1-208ENST00000434278 BAIAP3O94812 1187 aa23.03■■□□□ 1.28
LMBR1-208ENST00000434278 CYP3A4P08684 503 aa23.03■■□□□ 1.28
LMBR1-208ENST00000434278 MARK3P27448 753 aa23.03■■□□□ 1.28
LMBR1-208ENST00000434278 SDF4Q9BRK5 362 aa23.03■■□□□ 1.28
LMBR1-208ENST00000434278 PCDHA11Q9Y5I1 949 aa23.03■■□□□ 1.28
LMBR1-208ENST00000434278 IGLV3-22A0A075B6J6 115 aa23.02■■□□□ 1.28
LMBR1-208ENST00000434278 RSPH10B2B2RC85 870 aa23.02■■□□□ 1.28
LMBR1-208ENST00000434278 LGR5O75473 907 aa23.02■■□□□ 1.28
LMBR1-208ENST00000434278 RSPH10BP0C881 870 aa23.02■■□□□ 1.28
LMBR1-208ENST00000434278 GNAT1P11488 350 aa23.02■■□□□ 1.28
LMBR1-208ENST00000434278 SSRP1Q08945 709 aaKnown RBP23.02■■□□□ 1.28
LMBR1-208ENST00000434278 MCTP2Q6DN12 878 aa23.02■■□□□ 1.28
LMBR1-208ENST00000434278 CNKSR3Q6P9H4 555 aa23.02■■□□□ 1.28
LMBR1-208ENST00000434278 NIPA1Q7RTP0 329 aa23.02■■□□□ 1.28
LMBR1-208ENST00000434278 PLA2G4DQ86XP0 818 aa23.02■■□□□ 1.28
LMBR1-208ENST00000434278 CCDC148Q8NFR7 591 aa23.02■■□□□ 1.28
LMBR1-208ENST00000434278 GLG1Q92896 1179 aa23.02■■□□□ 1.28
LMBR1-208ENST00000434278 SLC9A7Q96T83 725 aa23.02■■□□□ 1.28
LMBR1-208ENST00000434278 SMARCAD1Q9H4L7 1026 aa23.02■■□□□ 1.28
LMBR1-208ENST00000434278 ERAP1Q9NZ08 941 aa23.02■■□□□ 1.28
LMBR1-208ENST00000434278 EMSYQ7Z589 1322 aa23.02■■□□□ 1.28
LMBR1-208ENST00000434278 NRCAMQ92823 1304 aa23.02■■□□□ 1.28
LMBR1-208ENST00000434278 CPLX1O14810 134 aa23.01■■□□□ 1.27
LMBR1-208ENST00000434278 FOSL2P15408 326 aa23.01■■□□□ 1.27
LMBR1-208ENST00000434278 ANAPC15P60006 121 aa23.01■■□□□ 1.27
LMBR1-208ENST00000434278 ACTR2P61160 394 aa23.01■■□□□ 1.27
LMBR1-208ENST00000434278 TRIM22Q8IYM9 498 aa23.01■■□□□ 1.27
LMBR1-208ENST00000434278 SLC17A8Q8NDX2 589 aa23.01■■□□□ 1.27
LMBR1-208ENST00000434278 PHOSPHO2Q8TCD6 241 aa23.01■■□□□ 1.27
LMBR1-208ENST00000434278 SLC28A3Q9HAS3 691 aa23.01■■□□□ 1.27
LMBR1-208ENST00000434278 PTPRSQ13332 1948 aa23■■□□□ 1.27
LMBR1-208ENST00000434278 WDR5P61964 334 aaKnown RBP23■■□□□ 1.27
LMBR1-208ENST00000434278 PPFIA1Q13136 1202 aa23■■□□□ 1.27
LMBR1-208ENST00000434278 HERC6Q8IVU3 1022 aa23■■□□□ 1.27
LMBR1-208ENST00000434278 BICD2Q8TD16 824 aa23■■□□□ 1.27
LMBR1-208ENST00000434278 UIMC1Q96RL1 719 aa23■■□□□ 1.27
LMBR1-208ENST00000434278 SH3GLB2Q9NR46 395 aa23■■□□□ 1.27
LMBR1-208ENST00000434278 DDX39AO00148 427 aaKnown RBP22.99■■□□□ 1.27
LMBR1-208ENST00000434278 DHX15O43143 795 aaKnown RBP22.99■■□□□ 1.27
LMBR1-208ENST00000434278 ATG7O95352 703 aa22.99■■□□□ 1.27
LMBR1-208ENST00000434278 DEXIO95424 95 aa22.99■■□□□ 1.27
LMBR1-208ENST00000434278 CCNE2O96020 404 aa22.99■■□□□ 1.27
LMBR1-208ENST00000434278 CTSHP09668 335 aa22.99■■□□□ 1.27
LMBR1-208ENST00000434278 NLRP5P59047 1200 aa22.99■■□□□ 1.27
LMBR1-208ENST00000434278 SCRN1Q12765 414 aa22.99■■□□□ 1.27
LMBR1-208ENST00000434278 GRIK4Q16099 956 aa22.99■■□□□ 1.27
LMBR1-208ENST00000434278 RUFY4Q6ZNE9 571 aa22.99■■□□□ 1.27
LMBR1-208ENST00000434278 AIFM3Q96NN9 605 aa22.99■■□□□ 1.27
LMBR1-208ENST00000434278 OSBPL7Q9BZF2 842 aa22.99■■□□□ 1.27
LMBR1-208ENST00000434278 PRDM12Q9H4Q4 367 aa22.99■■□□□ 1.27
LMBR1-208ENST00000434278 TPCN1Q9ULQ1 816 aa22.99■■□□□ 1.27
LMBR1-208ENST00000434278 KAT6AQ92794 2004 aa22.98■■□□□ 1.27
LMBR1-208ENST00000434278 EDIL3O43854 480 aa22.98■■□□□ 1.27
LMBR1-208ENST00000434278 CAND2O75155 1236 aa22.98■■□□□ 1.27
LMBR1-208ENST00000434278 SEC24BO95487 1268 aa22.98■■□□□ 1.27
LMBR1-208ENST00000434278 KCNJ6P48051 423 aa22.98■■□□□ 1.27
LMBR1-208ENST00000434278 DEFB103AP81534 67 aa22.98■■□□□ 1.27
LMBR1-208ENST00000434278 MARCH8Q5T0T0 291 aa22.98■■□□□ 1.27
LMBR1-208ENST00000434278 TMCO2Q7Z6W1 182 aaPredicted RBP22.98■■□□□ 1.27
LMBR1-208ENST00000434278 MAFAQ8NHW3 353 aaPredicted RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms