RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 RABGGTBP53611 331 aa25.29■■□□□ 1.64
SEMA3B-205ENST00000434030 AKAP17AQ02040 695 aaKnown RBP25.29■■□□□ 1.64
SEMA3B-205ENST00000434030 JAKMIP3Q5VZ66 844 aa25.29■■□□□ 1.64
SEMA3B-205ENST00000434030 TRAF7Q6Q0C0 670 aa25.29■■□□□ 1.64
SEMA3B-205ENST00000434030 SLC17A8Q8NDX2 589 aa25.29■■□□□ 1.64
SEMA3B-205ENST00000434030 RNF26Q9BY78 433 aaPredicted RBP25.29■■□□□ 1.64
SEMA3B-205ENST00000434030 UPF3BQ9BZI7 483 aaKnown RBP25.29■■□□□ 1.64
SEMA3B-205ENST00000434030 YBX2Q9Y2T7 364 aaKnown RBP25.29■■□□□ 1.64
SEMA3B-205ENST00000434030 ADAMTS3O15072 1205 aa25.28■■□□□ 1.64
SEMA3B-205ENST00000434030 CXCL10P02778 98 aa25.28■■□□□ 1.64
SEMA3B-205ENST00000434030 ARP10275 920 aa25.28■■□□□ 1.64
SEMA3B-205ENST00000434030 CEP55Q53EZ4 464 aa25.28■■□□□ 1.64
SEMA3B-205ENST00000434030 CCDC12Q8WUD4 166 aaPredicted RBP25.28■■□□□ 1.64
SEMA3B-205ENST00000434030 SLC26A6Q9BXS9 759 aa25.28■■□□□ 1.64
SEMA3B-205ENST00000434030 NKX2-4Q9H2Z4 354 aa25.28■■□□□ 1.64
SEMA3B-205ENST00000434030 SETD4Q9NVD3 440 aa25.28■■□□□ 1.64
SEMA3B-205ENST00000434030 ZNF274Q96GC6 653 aaPredicted RBP25.27■■□□□ 1.64
SEMA3B-205ENST00000434030 LARP6Q9BRS8 491 aaKnown RBP25.27■■□□□ 1.64
SEMA3B-205ENST00000434030 C6orf50Q9HD87 102 aa25.27■■□□□ 1.64
SEMA3B-205ENST00000434030 PCDHA11Q9Y5I1 949 aa25.27■■□□□ 1.64
SEMA3B-205ENST00000434030 WDR81Q562E7 1941 aa25.27■■□□□ 1.64
SEMA3B-205ENST00000434030 MICAL3Q7RTP6 2002 aa25.27■■□□□ 1.64
SEMA3B-205ENST00000434030 MYH9P35579 1960 aaKnown RBP25.26■■□□□ 1.63
SEMA3B-205ENST00000434030 MEIS1O00470 390 aa25.26■■□□□ 1.63
SEMA3B-205ENST00000434030 BAIAP3O94812 1187 aa25.26■■□□□ 1.63
SEMA3B-205ENST00000434030 GNAT1P11488 350 aa25.26■■□□□ 1.63
SEMA3B-205ENST00000434030 THPOP40225 353 aa25.26■■□□□ 1.63
SEMA3B-205ENST00000434030 ADAM17P78536 824 aa25.26■■□□□ 1.63
SEMA3B-205ENST00000434030 ARHGAP4P98171 946 aa25.26■■□□□ 1.63
SEMA3B-205ENST00000434030 PHOSPHO2Q8TCD6 241 aa25.26■■□□□ 1.63
SEMA3B-205ENST00000434030 SLC9A7Q96T83 725 aa25.26■■□□□ 1.63
SEMA3B-205ENST00000434030 JPH1Q9HDC5 661 aaPredicted RBP25.26■■□□□ 1.63
SEMA3B-205ENST00000434030 SLC9A2Q9UBY0 812 aa25.26■■□□□ 1.63
SEMA3B-205ENST00000434030 NFASCO94856 1347 aa25.26■■□□□ 1.63
SEMA3B-205ENST00000434030 MYOGP15173 224 aa25.25■■□□□ 1.63
SEMA3B-205ENST00000434030 FOSL2P15408 326 aa25.25■■□□□ 1.63
SEMA3B-205ENST00000434030 GNA11P29992 359 aa25.25■■□□□ 1.63
SEMA3B-205ENST00000434030 ZNF76P36508 570 aa25.25■■□□□ 1.63
SEMA3B-205ENST00000434030 MBTPS1Q14703 1052 aa25.25■■□□□ 1.63
SEMA3B-205ENST00000434030 CNKSR3Q6P9H4 555 aa25.25■■□□□ 1.63
SEMA3B-205ENST00000434030 CRYGNQ8WXF5 182 aa25.25■■□□□ 1.63
SEMA3B-205ENST00000434030 SLC28A3Q9HAS3 691 aa25.25■■□□□ 1.63
SEMA3B-205ENST00000434030 AGO4Q9HCK5 861 aaKnown RBP25.25■■□□□ 1.63
SEMA3B-205ENST00000434030 PDRG1Q9NUG6 133 aa25.25■■□□□ 1.63
SEMA3B-205ENST00000434030 NRCAMQ92823 1304 aa25.24■■□□□ 1.63
SEMA3B-205ENST00000434030 RSPH10B2B2RC85 870 aa25.24■■□□□ 1.63
SEMA3B-205ENST00000434030 RBAK-RBAKDNI3L0D1 243 aa25.24■■□□□ 1.63
SEMA3B-205ENST00000434030 CYP3A4P08684 503 aa25.24■■□□□ 1.63
SEMA3B-205ENST00000434030 RSPH10BP0C881 870 aa25.24■■□□□ 1.63
SEMA3B-205ENST00000434030 TCTN1Q2MV58 587 aa25.24■■□□□ 1.63
SEMA3B-205ENST00000434030 MCTP2Q6DN12 878 aa25.24■■□□□ 1.63
SEMA3B-205ENST00000434030 NIPA1Q7RTP0 329 aa25.24■■□□□ 1.63
SEMA3B-205ENST00000434030 REXO1Q8N1G1 1221 aaKnown RBP25.24■■□□□ 1.63
SEMA3B-205ENST00000434030 LMBR1Q8WVP7 490 aa25.24■■□□□ 1.63
SEMA3B-205ENST00000434030 SDF4Q9BRK5 362 aa25.24■■□□□ 1.63
SEMA3B-205ENST00000434030 SMARCAD1Q9H4L7 1026 aa25.24■■□□□ 1.63
SEMA3B-205ENST00000434030 ERAP1Q9NZ08 941 aa25.24■■□□□ 1.63
SEMA3B-205ENST00000434030 LOXHD1Q8IVV2 1947 aa25.24■■□□□ 1.63
SEMA3B-205ENST00000434030 CHD9Q3L8U1 2897 aa25.23■■□□□ 1.63
SEMA3B-205ENST00000434030 EYSQ5T1H1 3165 aa25.23■■□□□ 1.63
SEMA3B-205ENST00000434030 FAM86B1E9PN63 330 aa25.23■■□□□ 1.63
SEMA3B-205ENST00000434030 FAM86B2P0C5J1 330 aa25.23■■□□□ 1.63
SEMA3B-205ENST00000434030 MARK3P27448 753 aa25.23■■□□□ 1.63
SEMA3B-205ENST00000434030 ITGB3BPQ13352 177 aaPredicted RBP25.23■■□□□ 1.63
SEMA3B-205ENST00000434030 GLG1Q92896 1179 aa25.23■■□□□ 1.63
SEMA3B-205ENST00000434030 PCYT2Q99447 389 aa25.23■■□□□ 1.63
SEMA3B-205ENST00000434030 VPS54Q9P1Q0 977 aa25.23■■□□□ 1.63
SEMA3B-205ENST00000434030 SIP14410 1827 aa25.23■■□□□ 1.63
SEMA3B-205ENST00000434030 EMSYQ7Z589 1322 aa25.22■■□□□ 1.63
SEMA3B-205ENST00000434030 LGR5O75473 907 aa25.22■■□□□ 1.63
SEMA3B-205ENST00000434030 WDR5P61964 334 aaKnown RBP25.22■■□□□ 1.63
SEMA3B-205ENST00000434030 SSRP1Q08945 709 aaKnown RBP25.22■■□□□ 1.63
SEMA3B-205ENST00000434030 CCDC148Q8NFR7 591 aa25.22■■□□□ 1.63
SEMA3B-205ENST00000434030 MAFAQ8NHW3 353 aaPredicted RBP25.22■■□□□ 1.63
SEMA3B-205ENST00000434030 IGLV3-22A0A075B6J6 115 aa25.21■■□□□ 1.63
SEMA3B-205ENST00000434030 CAND2O75155 1236 aa25.21■■□□□ 1.63
SEMA3B-205ENST00000434030 KCNJ6P48051 423 aa25.21■■□□□ 1.63
SEMA3B-205ENST00000434030 ACTR2P61160 394 aa25.21■■□□□ 1.63
SEMA3B-205ENST00000434030 STK3Q13188 491 aa25.21■■□□□ 1.63
SEMA3B-205ENST00000434030 PLA2G4DQ86XP0 818 aa25.21■■□□□ 1.63
SEMA3B-205ENST00000434030 HERC6Q8IVU3 1022 aa25.21■■□□□ 1.63
SEMA3B-205ENST00000434030 TRIM22Q8IYM9 498 aa25.21■■□□□ 1.63
SEMA3B-205ENST00000434030 BICD2Q8TD16 824 aa25.21■■□□□ 1.63
SEMA3B-205ENST00000434030 RASGRP4Q8TDF6 673 aa25.21■■□□□ 1.63
SEMA3B-205ENST00000434030 PRDM12Q9H4Q4 367 aa25.21■■□□□ 1.63
SEMA3B-205ENST00000434030 SH3GLB2Q9NR46 395 aa25.21■■□□□ 1.63
SEMA3B-205ENST00000434030 ABHD14A-ACY1A0A1B0GW23 586 aa25.2■■□□□ 1.62
SEMA3B-205ENST00000434030 CPLX1O14810 134 aa25.2■■□□□ 1.62
SEMA3B-205ENST00000434030 PPFIA1Q13136 1202 aa25.2■■□□□ 1.62
SEMA3B-205ENST00000434030 PPP2R2DQ66LE6 453 aa25.2■■□□□ 1.62
SEMA3B-205ENST00000434030 EVPLQ92817 2033 aa25.2■■□□□ 1.62
SEMA3B-205ENST00000434030 ATG7O95352 703 aa25.19■■□□□ 1.62
SEMA3B-205ENST00000434030 ANAPC15P60006 121 aa25.19■■□□□ 1.62
SEMA3B-205ENST00000434030 DEFB103AP81534 67 aa25.19■■□□□ 1.62
SEMA3B-205ENST00000434030 IKBKEQ14164 716 aa25.19■■□□□ 1.62
SEMA3B-205ENST00000434030 GRIK4Q16099 956 aa25.19■■□□□ 1.62
SEMA3B-205ENST00000434030 DBF4BQ8NFT6 615 aa25.19■■□□□ 1.62
SEMA3B-205ENST00000434030 AZI2Q9H6S1 392 aa25.19■■□□□ 1.62
SEMA3B-205ENST00000434030 KIF28PB7ZC32 967 aa25.18■■□□□ 1.62
SEMA3B-205ENST00000434030 DHX15O43143 795 aaKnown RBP25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms