RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 SEPT2Q15019 361 aa8.33□□□□□ -1.08
COL17A1-204ENST00000433822 NAALADL2Q58DX5 795 aa8.33□□□□□ -1.08
COL17A1-204ENST00000433822 FIGNQ5HY92 759 aa8.33□□□□□ -1.08
COL17A1-204ENST00000433822 MFSD14BQ5SR56 506 aa8.33□□□□□ -1.08
COL17A1-204ENST00000433822 GPATCH4Q5T3I0 446 aaKnown RBP8.33□□□□□ -1.08
COL17A1-204ENST00000433822 RRAGBQ5VZM2 374 aa8.33□□□□□ -1.08
COL17A1-204ENST00000433822 SYT10Q6XYQ8 523 aa8.33□□□□□ -1.08
COL17A1-204ENST00000433822 HOMER1Q86YM7 354 aa8.33□□□□□ -1.08
COL17A1-204ENST00000433822 FAM114A1Q8IWE2 563 aa8.33□□□□□ -1.08
COL17A1-204ENST00000433822 GRAMD1CQ8IYS0 662 aa8.33□□□□□ -1.08
COL17A1-204ENST00000433822 IGSF22Q8N9C0 903 aa8.33□□□□□ -1.08
COL17A1-204ENST00000433822 GIMAP8Q8ND71 665 aaPredicted RBP8.33□□□□□ -1.08
COL17A1-204ENST00000433822 FLAD1Q8NFF5 587 aa8.33□□□□□ -1.08
COL17A1-204ENST00000433822 MTMR8Q96EF0 704 aa8.33□□□□□ -1.08
COL17A1-204ENST00000433822 DYNLL2Q96FJ2 89 aa8.33□□□□□ -1.08
COL17A1-204ENST00000433822 C7orf25Q9BPX7 421 aa8.33□□□□□ -1.08
COL17A1-204ENST00000433822 RAB34Q9BZG1 259 aa8.33□□□□□ -1.08
COL17A1-204ENST00000433822 FAM117AQ9C073 453 aa8.33□□□□□ -1.08
COL17A1-204ENST00000433822 MTMR4Q9NYA4 1195 aa8.33□□□□□ -1.08
COL17A1-204ENST00000433822 DDX41Q9UJV9 622 aaKnown RBP8.33□□□□□ -1.08
COL17A1-204ENST00000433822 SYNPO2Q9UMS6 1093 aa8.33□□□□□ -1.08
COL17A1-204ENST00000433822 PHF24Q9UPV7 400 aa8.33□□□□□ -1.08
COL17A1-204ENST00000433822 CD2APQ9Y5K6 639 aa8.33□□□□□ -1.08
COL17A1-204ENST00000433822 ARFGEF1Q9Y6D6 1849 aa8.33□□□□□ -1.08
COL17A1-204ENST00000433822 PVALEFA0A1B0GWK0 134 aa8.32□□□□□ -1.08
COL17A1-204ENST00000433822 hCG_1642624A0A1W2PR95 340 aa8.32□□□□□ -1.08
COL17A1-204ENST00000433822 LGALS16A8MUM7 142 aa8.32□□□□□ -1.08
COL17A1-204ENST00000433822 KLRC4O43908 158 aa8.32□□□□□ -1.08
COL17A1-204ENST00000433822 TADA3O75528 432 aa8.32□□□□□ -1.08
COL17A1-204ENST00000433822 TUBBP07437 444 aa8.32□□□□□ -1.08
COL17A1-204ENST00000433822 PDHBP11177 359 aa8.32□□□□□ -1.08
COL17A1-204ENST00000433822 NPR1P16066 1061 aa8.32□□□□□ -1.08
COL17A1-204ENST00000433822 RFC5P40937 340 aa8.32□□□□□ -1.08
COL17A1-204ENST00000433822 COPB1P53618 953 aaKnown RBP8.32□□□□□ -1.08
COL17A1-204ENST00000433822 NAPAP54920 295 aa8.32□□□□□ -1.08
COL17A1-204ENST00000433822 MCCD1P59942 119 aaPredicted RBP8.32□□□□□ -1.08
COL17A1-204ENST00000433822 KRT31Q15323 416 aa8.32□□□□□ -1.08
COL17A1-204ENST00000433822 NOM1Q5C9Z4 860 aaKnown RBP8.32□□□□□ -1.08
COL17A1-204ENST00000433822 TCP11X2Q5H9J9 407 aa8.32□□□□□ -1.08
COL17A1-204ENST00000433822 SOGA3Q5TF21 947 aa8.32□□□□□ -1.08
COL17A1-204ENST00000433822 JAKMIP3Q5VZ66 844 aa8.32□□□□□ -1.08
COL17A1-204ENST00000433822 PPP4R3AQ6IN85 833 aa8.32□□□□□ -1.08
COL17A1-204ENST00000433822 MOXD1Q6UVY6 613 aa8.32□□□□□ -1.08
COL17A1-204ENST00000433822 HEATR3Q7Z4Q2 680 aa8.32□□□□□ -1.08
COL17A1-204ENST00000433822 REXO1Q8N1G1 1221 aaKnown RBP8.32□□□□□ -1.08
COL17A1-204ENST00000433822 NLGN1Q8N2Q7 840 aa8.32□□□□□ -1.08
COL17A1-204ENST00000433822 ZNF592Q92610 1267 aa8.32□□□□□ -1.08
COL17A1-204ENST00000433822 NUP58Q9BVL2 599 aa8.32□□□□□ -1.08
COL17A1-204ENST00000433822 TRIM34Q9BYJ4 488 aa8.32□□□□□ -1.08
COL17A1-204ENST00000433822 KDM4CQ9H3R0 1056 aa8.32□□□□□ -1.08
COL17A1-204ENST00000433822 ARGLU1Q9NWB6 273 aaPredicted RBP8.32□□□□□ -1.08
COL17A1-204ENST00000433822 POLLQ9UGP5 575 aa8.32□□□□□ -1.08
COL17A1-204ENST00000433822 GDF2Q9UK05 429 aaPredicted RBP8.32□□□□□ -1.08
COL17A1-204ENST00000433822 STX8Q9UNK0 236 aa8.32□□□□□ -1.08
COL17A1-204ENST00000433822 CTNND2Q9UQB3 1225 aa8.32□□□□□ -1.08
COL17A1-204ENST00000433822 DAGLAQ9Y4D2 1042 aa8.32□□□□□ -1.08
COL17A1-204ENST00000433822 PARP3Q9Y6F1 533 aa8.32□□□□□ -1.08
COL17A1-204ENST00000433822 A0A1W2PQJ5 194 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 USP17L3A6NCW0 530 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 USP17L4A6NCW7 530 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 SMCO2A6NFE2 343 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 KCNJ18B7U540 433 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 SHISA8B8ZZ34 492 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 N4BP3O15049 544 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 TTLL1O95922 423 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 GYPCP04921 128 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 VEGFAP15692 232 aaPredicted RBP8.31□□□□□ -1.08
COL17A1-204ENST00000433822 CCNE1P24864 410 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 ALDH1B1P30837 517 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 PRCPP42785 496 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 DNM2P50570 870 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 CDK17Q00537 523 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 GABPB1Q06547 395 aaPredicted RBP8.31□□□□□ -1.08
COL17A1-204ENST00000433822 DDR1Q08345 913 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 PSMD2Q13200 908 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 KCNJ12Q14500 433 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 GRIK5Q16478 980 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 INF2Q27J81 1249 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 HYIQ5T013 277 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 UTP14CQ5TAP6 766 aaKnown RBP8.31□□□□□ -1.08
COL17A1-204ENST00000433822 TTI2Q6NXR4 508 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 CYP26C1Q6V0L0 522 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 SMIM5Q71RC9 77 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 USP17L1Q7RTZ2 530 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 CABP7Q86V35 215 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 MAPKAPK5Q8IW41 473 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 MSL3Q8N5Y2 521 aaKnown RBP8.31□□□□□ -1.08
COL17A1-204ENST00000433822 ZNF507Q8TCN5 953 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 NELFBQ8WX92 580 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 CEP95Q96GE4 821 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 MTMR9Q96QG7 549 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 TRIM9Q9C026 710 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 TMEM60Q9H2L4 133 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 DHX36Q9H2U1 1008 aaKnown RBP8.31□□□□□ -1.08
COL17A1-204ENST00000433822 RRAGCQ9HB90 399 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 MRFAP1Q9Y605 127 aa8.31□□□□□ -1.08
COL17A1-204ENST00000433822 PNMA6FA0A0J9YX94 578 aa8.3□□□□□ -1.08
COL17A1-204ENST00000433822 TEX33O43247 280 aa8.3□□□□□ -1.08
COL17A1-204ENST00000433822 FGFR1OPO95684 399 aaKnown RBP8.3□□□□□ -1.08
COL17A1-204ENST00000433822 FBXO45P0C2W1 286 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms