RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 PPARGC1AQ9UBK2 798 aaKnown RBP7.98□□□□□ -1.13
HDAC9-213ENST00000433709 SIT1Q9Y3P8 196 aa7.98□□□□□ -1.13
HDAC9-213ENST00000433709 IGSF3O75054 1194 aa7.97□□□□□ -1.13
HDAC9-213ENST00000433709 HSPA1LP34931 641 aa7.97□□□□□ -1.13
HDAC9-213ENST00000433709 MAPKAPK2P49137 400 aa7.97□□□□□ -1.13
HDAC9-213ENST00000433709 PRR5P85299 388 aa7.97□□□□□ -1.13
HDAC9-213ENST00000433709 SQSTM1Q13501 440 aa7.97□□□□□ -1.13
HDAC9-213ENST00000433709 PLEKHN1Q494U1 663 aaPredicted RBP7.97□□□□□ -1.13
HDAC9-213ENST00000433709 ZC3H12BQ5HYM0 836 aaKnown RBP7.97□□□□□ -1.13
HDAC9-213ENST00000433709 TMC6Q7Z403 805 aa7.97□□□□□ -1.13
HDAC9-213ENST00000433709 KCNN1Q92952 543 aa7.97□□□□□ -1.13
HDAC9-213ENST00000433709 CDIP1Q9H305 208 aa7.97□□□□□ -1.13
HDAC9-213ENST00000433709 DBR1Q9UK59 544 aaKnown RBP7.97□□□□□ -1.13
HDAC9-213ENST00000433709 X6R8D5 127 aa7.97□□□□□ -1.13
HDAC9-213ENST00000433709 RPGRIP1LQ68CZ1 1315 aa7.97□□□□□ -1.13
HDAC9-213ENST00000433709 DIP2AQ14689 1571 aa7.97□□□□□ -1.13
HDAC9-213ENST00000433709 HFM1A2PYH4 1435 aa7.96□□□□□ -1.13
HDAC9-213ENST00000433709 ZFYVE9O95405 1425 aa7.96□□□□□ -1.13
HDAC9-213ENST00000433709 FAM135BQ49AJ0 1406 aa7.96□□□□□ -1.13
HDAC9-213ENST00000433709 HRKO00198 91 aa7.96□□□□□ -1.14
HDAC9-213ENST00000433709 ABLIM1O14639 778 aa7.96□□□□□ -1.14
HDAC9-213ENST00000433709 TXKP42681 527 aa7.96□□□□□ -1.14
HDAC9-213ENST00000433709 ZC3H14Q6PJT7 736 aaKnown RBP7.96□□□□□ -1.14
HDAC9-213ENST00000433709 LBX2Q6XYB7 198 aa7.96□□□□□ -1.14
HDAC9-213ENST00000433709 Q8N1Y9 231 aa7.96□□□□□ -1.14
HDAC9-213ENST00000433709 NETO2Q8NC67 525 aa7.96□□□□□ -1.14
HDAC9-213ENST00000433709 PTPRN2Q92932 1015 aa7.96□□□□□ -1.14
HDAC9-213ENST00000433709 RNPC3Q96LT9 517 aaKnown RBP7.96□□□□□ -1.14
HDAC9-213ENST00000433709 MBD1Q9UIS9 605 aaPredicted RBP7.96□□□□□ -1.14
HDAC9-213ENST00000433709 PLA2G2DQ9UNK4 145 aa7.96□□□□□ -1.14
HDAC9-213ENST00000433709 TMEM94Q12767 1356 aa7.96□□□□□ -1.14
HDAC9-213ENST00000433709 TEX51A0A1B0GUA7 166 aa7.95□□□□□ -1.14
HDAC9-213ENST00000433709 ETV2O00321 342 aaPredicted RBP7.95□□□□□ -1.14
HDAC9-213ENST00000433709 GPR85P60893 370 aa7.95□□□□□ -1.14
HDAC9-213ENST00000433709 TMEM62Q0P6H9 643 aa7.95□□□□□ -1.14
HDAC9-213ENST00000433709 IFNL3Q8IZI9 196 aa7.95□□□□□ -1.14
HDAC9-213ENST00000433709 ZFYVE21Q9BQ24 234 aa7.95□□□□□ -1.14
HDAC9-213ENST00000433709 JAM3Q9BX67 310 aa7.95□□□□□ -1.14
HDAC9-213ENST00000433709 BCAS3Q9H6U6 928 aa7.95□□□□□ -1.14
HDAC9-213ENST00000433709 CNTD2Q9H8S5 307 aa7.95□□□□□ -1.14
HDAC9-213ENST00000433709 SIRT5Q9NXA8 310 aa7.95□□□□□ -1.14
HDAC9-213ENST00000433709 TMEM131LA2VDJ0 1609 aa7.95□□□□□ -1.14
HDAC9-213ENST00000433709 E9PCH4 1651 aa7.95□□□□□ -1.14
HDAC9-213ENST00000433709 NAIPQ13075 1403 aa7.95□□□□□ -1.14
HDAC9-213ENST00000433709 H7BY64 318 aa7.94□□□□□ -1.14
HDAC9-213ENST00000433709 ATF3P18847 181 aa7.94□□□□□ -1.14
HDAC9-213ENST00000433709 MROH9Q5TGP6 573 aa7.94□□□□□ -1.14
HDAC9-213ENST00000433709 OLFML2BQ68BL8 750 aa7.94□□□□□ -1.14
HDAC9-213ENST00000433709 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.94□□□□□ -1.14
HDAC9-213ENST00000433709 GCM1Q9NP62 436 aa7.94□□□□□ -1.14
HDAC9-213ENST00000433709 TRPM2O94759 1503 aa7.93□□□□□ -1.14
HDAC9-213ENST00000433709 NWD1Q149M9 1564 aa7.93□□□□□ -1.14
HDAC9-213ENST00000433709 ESYT3A0FGR9 886 aa7.93□□□□□ -1.14
HDAC9-213ENST00000433709 KRT1P04264 644 aa7.93□□□□□ -1.14
HDAC9-213ENST00000433709 TMEM253P0C7T8 217 aa7.93□□□□□ -1.14
HDAC9-213ENST00000433709 CDR1P51861 262 aa7.93□□□□□ -1.14
HDAC9-213ENST00000433709 NCKAP1LP55160 1127 aa7.93□□□□□ -1.14
HDAC9-213ENST00000433709 GABREP78334 506 aa7.93□□□□□ -1.14
HDAC9-213ENST00000433709 DLG4P78352 724 aa7.93□□□□□ -1.14
HDAC9-213ENST00000433709 RBM10P98175 930 aaKnown RBP7.93□□□□□ -1.14
HDAC9-213ENST00000433709 ZNF200P98182 395 aaPredicted RBP7.93□□□□□ -1.14
HDAC9-213ENST00000433709 ZNF124Q15973 351 aa7.93□□□□□ -1.14
HDAC9-213ENST00000433709 MAMDC2Q7Z304 686 aaPredicted RBP7.93□□□□□ -1.14
HDAC9-213ENST00000433709 RIOX2Q8IUF8 465 aa7.93□□□□□ -1.14
HDAC9-213ENST00000433709 PEX11GQ96HA9 241 aa7.93□□□□□ -1.14
HDAC9-213ENST00000433709 SLC38A3Q99624 504 aa7.93□□□□□ -1.14
HDAC9-213ENST00000433709 SLC52A2Q9HAB3 445 aa7.93□□□□□ -1.14
HDAC9-213ENST00000433709 NDOR1Q9UHB4 597 aa7.93□□□□□ -1.14
HDAC9-213ENST00000433709 COA3Q9Y2R0 106 aaPredicted RBP7.93□□□□□ -1.14
HDAC9-213ENST00000433709 PCDHA8Q9Y5H6 950 aa7.93□□□□□ -1.14
HDAC9-213ENST00000433709 MRPL42Q9Y6G3 142 aaKnown RBP7.93□□□□□ -1.14
HDAC9-213ENST00000433709 CCDC163A0A0D9SF12 145 aa7.92□□□□□ -1.14
HDAC9-213ENST00000433709 SGSM2O43147 1006 aa7.92□□□□□ -1.14
HDAC9-213ENST00000433709 SEMA7AO75326 666 aa7.92□□□□□ -1.14
HDAC9-213ENST00000433709 EPHB3P54753 998 aa7.92□□□□□ -1.14
HDAC9-213ENST00000433709 KIZQ2M2Z5 673 aa7.92□□□□□ -1.14
HDAC9-213ENST00000433709 JAZF1Q86VZ6 243 aa7.92□□□□□ -1.14
HDAC9-213ENST00000433709 LDHDQ86WU2 507 aa7.92□□□□□ -1.14
HDAC9-213ENST00000433709 SLC7A14Q8TBB6 771 aa7.92□□□□□ -1.14
HDAC9-213ENST00000433709 KCNJ15Q99712 375 aa7.92□□□□□ -1.14
HDAC9-213ENST00000433709 KRTAP4-8Q9BYQ9 185 aa7.92□□□□□ -1.14
HDAC9-213ENST00000433709 NUDT5Q9UKK9 219 aa7.92□□□□□ -1.14
HDAC9-213ENST00000433709 PCDHA9Q9Y5H5 950 aa7.92□□□□□ -1.14
HDAC9-213ENST00000433709 AQP7O14520 342 aa7.91□□□□□ -1.14
HDAC9-213ENST00000433709 PPP1R12AO14974 1030 aaPredicted RBP7.91□□□□□ -1.14
HDAC9-213ENST00000433709 SOD2P04179 222 aa7.91□□□□□ -1.14
HDAC9-213ENST00000433709 C8AP07357 584 aa7.91□□□□□ -1.14
HDAC9-213ENST00000433709 C1QTNF9P0C862 333 aa7.91□□□□□ -1.14
HDAC9-213ENST00000433709 GRK2P25098 689 aa7.91□□□□□ -1.14
HDAC9-213ENST00000433709 GRK3P35626 688 aa7.91□□□□□ -1.14
HDAC9-213ENST00000433709 GUCY1A3Q02108 690 aa7.91□□□□□ -1.14
HDAC9-213ENST00000433709 ATG14Q6ZNE5 492 aa7.91□□□□□ -1.14
HDAC9-213ENST00000433709 DCP2Q8IU60 420 aaKnown RBP7.91□□□□□ -1.14
HDAC9-213ENST00000433709 TSPAN17Q96FV3 270 aa7.91□□□□□ -1.14
HDAC9-213ENST00000433709 AP5M1Q9H0R1 490 aa7.91□□□□□ -1.14
HDAC9-213ENST00000433709 IPPKQ9H8X2 491 aa7.91□□□□□ -1.14
HDAC9-213ENST00000433709 NCOA5Q9HCD5 579 aaKnown RBP7.91□□□□□ -1.14
HDAC9-213ENST00000433709 TMEM260Q9NX78 707 aa7.91□□□□□ -1.14
HDAC9-213ENST00000433709 DCCP43146 1447 aa7.91□□□□□ -1.14
HDAC9-213ENST00000433709 SPHKAPQ2M3C7 1700 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms