RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 CDC45O75419 566 aa25.02■■□□□ 1.6
RPUSD3-206ENST00000433535 EXOSC10Q01780 885 aaKnown RBP25.02■■□□□ 1.6
RPUSD3-206ENST00000433535 TFF2Q03403 129 aa25.02■■□□□ 1.6
RPUSD3-206ENST00000433535 MTMR1Q13613 665 aa25.02■■□□□ 1.6
RPUSD3-206ENST00000433535 PLEKHG4Q58EX7 1191 aa25.02■■□□□ 1.6
RPUSD3-206ENST00000433535 TYW1BQ6NUM6 668 aa25.02■■□□□ 1.6
RPUSD3-206ENST00000433535 GIMAP8Q8ND71 665 aaPredicted RBP25.02■■□□□ 1.6
RPUSD3-206ENST00000433535 GDPD5Q8WTR4 605 aa25.02■■□□□ 1.6
RPUSD3-206ENST00000433535 RAD9AQ99638 391 aa25.02■■□□□ 1.6
RPUSD3-206ENST00000433535 TSPYL2Q9H2G4 693 aaPredicted RBP25.02■■□□□ 1.6
RPUSD3-206ENST00000433535 RBM28Q9NW13 759 aaKnown RBP25.02■■□□□ 1.6
RPUSD3-206ENST00000433535 SIP14410 1827 aa25.02■■□□□ 1.6
RPUSD3-206ENST00000433535 GNAT1P11488 350 aa25.01■■□□□ 1.59
RPUSD3-206ENST00000433535 RTN1Q16799 776 aa25.01■■□□□ 1.59
RPUSD3-206ENST00000433535 DHX32Q7L7V1 743 aaKnown RBP25.01■■□□□ 1.59
RPUSD3-206ENST00000433535 MYOCDQ8IZQ8 938 aa25.01■■□□□ 1.59
RPUSD3-206ENST00000433535 ADAMTS19Q8TE59 1207 aa25.01■■□□□ 1.59
RPUSD3-206ENST00000433535 CDHR1Q96JP9 859 aa25.01■■□□□ 1.59
RPUSD3-206ENST00000433535 PGBD1Q96JS3 809 aa25.01■■□□□ 1.59
RPUSD3-206ENST00000433535 ZBTB43O43298 467 aa25■■□□□ 1.59
RPUSD3-206ENST00000433535 CAND2O75155 1236 aa25■■□□□ 1.59
RPUSD3-206ENST00000433535 MARK3P27448 753 aa25■■□□□ 1.59
RPUSD3-206ENST00000433535 NAPAP54920 295 aa25■■□□□ 1.59
RPUSD3-206ENST00000433535 ADAM17P78536 824 aa25■■□□□ 1.59
RPUSD3-206ENST00000433535 FUT2Q10981 343 aa25■■□□□ 1.59
RPUSD3-206ENST00000433535 GSTTP1A0A1W2PQM5 241 aa24.99■■□□□ 1.59
RPUSD3-206ENST00000433535 LINC01553A4QN01 128 aa24.99■■□□□ 1.59
RPUSD3-206ENST00000433535 AMHP03971 560 aa24.99■■□□□ 1.59
RPUSD3-206ENST00000433535 IL27Q8NEV9 243 aa24.99■■□□□ 1.59
RPUSD3-206ENST00000433535 SEPT8Q92599 483 aa24.99■■□□□ 1.59
RPUSD3-206ENST00000433535 KAT6AQ92794 2004 aa24.99■■□□□ 1.59
RPUSD3-206ENST00000433535 JADE2Q9NQC1 790 aa24.99■■□□□ 1.59
RPUSD3-206ENST00000433535 TRANK1O15050 2925 aa24.99■■□□□ 1.59
RPUSD3-206ENST00000433535 NRCAMQ92823 1304 aa24.98■■□□□ 1.59
RPUSD3-206ENST00000433535 KLF18A0A0U1RQI7 1052 aa24.98■■□□□ 1.59
RPUSD3-206ENST00000433535 GOLGA8AA7E2F4 631 aa24.98■■□□□ 1.59
RPUSD3-206ENST00000433535 GOLGA8BA8MQT2 603 aa24.98■■□□□ 1.59
RPUSD3-206ENST00000433535 TNFRSF10AO00220 468 aa24.98■■□□□ 1.59
RPUSD3-206ENST00000433535 TSGA10IPQ3SY00 556 aa24.98■■□□□ 1.59
RPUSD3-206ENST00000433535 RUFY4Q6ZNE9 571 aa24.98■■□□□ 1.59
RPUSD3-206ENST00000433535 SEPT1Q8WYJ6 367 aa24.98■■□□□ 1.59
RPUSD3-206ENST00000433535 TGS1Q96RS0 853 aaKnown RBP24.98■■□□□ 1.59
RPUSD3-206ENST00000433535 EHMT1Q9H9B1 1298 aa24.98■■□□□ 1.59
RPUSD3-206ENST00000433535 CENPBP07199 599 aaPredicted RBP24.97■■□□□ 1.59
RPUSD3-206ENST00000433535 KCNQ1P51787 676 aa24.97■■□□□ 1.59
RPUSD3-206ENST00000433535 ERVK-21P61565 698 aa24.97■■□□□ 1.59
RPUSD3-206ENST00000433535 PPFIA1Q13136 1202 aa24.97■■□□□ 1.59
RPUSD3-206ENST00000433535 PPP1R18Q6NYC8 613 aa24.97■■□□□ 1.59
RPUSD3-206ENST00000433535 CYP2W1Q8TAV3 490 aa24.97■■□□□ 1.59
RPUSD3-206ENST00000433535 GLG1Q92896 1179 aa24.97■■□□□ 1.59
RPUSD3-206ENST00000433535 SUGCTQ9HAC7 445 aa24.97■■□□□ 1.59
RPUSD3-206ENST00000433535 RIC8AQ9NPQ8 531 aa24.97■■□□□ 1.59
RPUSD3-206ENST00000433535 NAP1L2Q9ULW6 460 aaPredicted RBP24.97■■□□□ 1.59
RPUSD3-206ENST00000433535 V9GY48 417 aaPredicted RBP24.97■■□□□ 1.59
RPUSD3-206ENST00000433535 REV3LO60673 3130 aa24.97■■□□□ 1.59
RPUSD3-206ENST00000433535 TCF20Q9UGU0 1960 aaKnown RBP24.96■■□□□ 1.59
RPUSD3-206ENST00000433535 STXBP3O00186 592 aa24.96■■□□□ 1.59
RPUSD3-206ENST00000433535 CPA1P15085 419 aa24.96■■□□□ 1.59
RPUSD3-206ENST00000433535 CDC27P30260 824 aa24.96■■□□□ 1.59
RPUSD3-206ENST00000433535 ADCY7P51828 1080 aa24.96■■□□□ 1.59
RPUSD3-206ENST00000433535 KRT32Q14532 448 aa24.96■■□□□ 1.59
RPUSD3-206ENST00000433535 UHRF1Q96T88 793 aaPredicted RBP24.96■■□□□ 1.59
RPUSD3-206ENST00000433535 ANO3Q9BYT9 981 aa24.96■■□□□ 1.59
RPUSD3-206ENST00000433535 JPH1Q9HDC5 661 aaPredicted RBP24.96■■□□□ 1.59
RPUSD3-206ENST00000433535 KCNH7Q9NS40 1196 aa24.96■■□□□ 1.59
RPUSD3-206ENST00000433535 FAM217BQ9NTX9 383 aaPredicted RBP24.96■■□□□ 1.59
RPUSD3-206ENST00000433535 TMEM260Q9NX78 707 aa24.96■■□□□ 1.59
RPUSD3-206ENST00000433535 ERAP1Q9NZ08 941 aa24.96■■□□□ 1.59
RPUSD3-206ENST00000433535 INSL6Q9Y581 213 aa24.96■■□□□ 1.59
RPUSD3-206ENST00000433535 GRIK4Q16099 956 aa24.95■■□□□ 1.58
RPUSD3-206ENST00000433535 FAM26DQ5JW98 314 aa24.95■■□□□ 1.58
RPUSD3-206ENST00000433535 NECAB3Q96P71 396 aaPredicted RBP24.95■■□□□ 1.58
RPUSD3-206ENST00000433535 MXRA8Q9BRK3 442 aa24.95■■□□□ 1.58
RPUSD3-206ENST00000433535 C17orf80Q9BSJ5 609 aa24.95■■□□□ 1.58
RPUSD3-206ENST00000433535 TUBE1Q9UJT0 475 aa24.95■■□□□ 1.58
RPUSD3-206ENST00000433535 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.94■■□□□ 1.58
RPUSD3-206ENST00000433535 CHRNA1P02708 482 aa24.94■■□□□ 1.58
RPUSD3-206ENST00000433535 HTRA4P83105 476 aaPredicted RBP24.94■■□□□ 1.58
RPUSD3-206ENST00000433535 ZBTB10Q96DT7 871 aa24.94■■□□□ 1.58
RPUSD3-206ENST00000433535 PCYT2Q99447 389 aa24.94■■□□□ 1.58
RPUSD3-206ENST00000433535 IFIH1Q9BYX4 1025 aaKnown RBP24.94■■□□□ 1.58
RPUSD3-206ENST00000433535 SMARCAD1Q9H4L7 1026 aa24.94■■□□□ 1.58
RPUSD3-206ENST00000433535 SLC9A2Q9UBY0 812 aa24.94■■□□□ 1.58
RPUSD3-206ENST00000433535 SMCO2A6NFE2 343 aa24.93■■□□□ 1.58
RPUSD3-206ENST00000433535 MAFGO15525 162 aa24.93■■□□□ 1.58
RPUSD3-206ENST00000433535 UPP2O95045 317 aa24.93■■□□□ 1.58
RPUSD3-206ENST00000433535 GHRP10912 638 aa24.93■■□□□ 1.58
RPUSD3-206ENST00000433535 IGBP1P78318 339 aa24.93■■□□□ 1.58
RPUSD3-206ENST00000433535 FGD1P98174 961 aa24.93■■□□□ 1.58
RPUSD3-206ENST00000433535 TAF2Q6P1X5 1199 aa24.93■■□□□ 1.58
RPUSD3-206ENST00000433535 SP7Q8TDD2 431 aaPredicted RBP24.93■■□□□ 1.58
RPUSD3-206ENST00000433535 BARHL2Q9NY43 387 aa24.93■■□□□ 1.58
RPUSD3-206ENST00000433535 hCG_1984214I3L0E3 225 aa24.92■■□□□ 1.58
RPUSD3-206ENST00000433535 ARP10275 920 aa24.92■■□□□ 1.58
RPUSD3-206ENST00000433535 BMP1P13497 986 aa24.92■■□□□ 1.58
RPUSD3-206ENST00000433535 APOBRQ0VD83 1088 aa24.92■■□□□ 1.58
RPUSD3-206ENST00000433535 AAK1Q2M2I8 961 aa24.92■■□□□ 1.58
RPUSD3-206ENST00000433535 MARCH8Q5T0T0 291 aa24.92■■□□□ 1.58
RPUSD3-206ENST00000433535 ZNF713Q8N859 430 aaPredicted RBP24.92■■□□□ 1.58
RPUSD3-206ENST00000433535 DNAJB3Q8WWF6 145 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms