RNA–Protein interactions for RNA: ENST00000432213.1

SEC13-212, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-212ENST00000432213 MGAT3Q09327 533 aa16.38■□□□□ 0.21
SEC13-212ENST00000432213 EPC2Q52LR7 807 aa16.38■□□□□ 0.21
SEC13-212ENST00000432213 TYW1BQ6NUM6 668 aa16.38■□□□□ 0.21
SEC13-212ENST00000432213 SMARCC2Q8TAQ2 1214 aa16.38■□□□□ 0.21
SEC13-212ENST00000432213 RUFY2Q8WXA3 655 aa16.38■□□□□ 0.21
SEC13-212ENST00000432213 LINC01599Q8WXQ3 324 aa16.38■□□□□ 0.21
SEC13-212ENST00000432213 TOP1MTQ969P6 601 aa16.38■□□□□ 0.21
SEC13-212ENST00000432213 INSL6Q9Y581 213 aa16.38■□□□□ 0.21
SEC13-212ENST00000432213 C5orf42Q9H799 3197 aa16.38■□□□□ 0.21
SEC13-212ENST00000432213 SLC27A2O14975 620 aa16.37■□□□□ 0.21
SEC13-212ENST00000432213 DDAH1O94760 285 aa16.37■□□□□ 0.21
SEC13-212ENST00000432213 TCF7P36402 384 aaPredicted RBP16.37■□□□□ 0.21
SEC13-212ENST00000432213 NEDD9Q14511 834 aa16.37■□□□□ 0.21
SEC13-212ENST00000432213 FAM26DQ5JW98 314 aa16.37■□□□□ 0.21
SEC13-212ENST00000432213 MARCH8Q5T0T0 291 aa16.37■□□□□ 0.21
SEC13-212ENST00000432213 CCDC82Q8N4S0 544 aa16.37■□□□□ 0.21
SEC13-212ENST00000432213 RRP36Q96EU6 259 aaKnown RBP16.37■□□□□ 0.21
SEC13-212ENST00000432213 PCYT2Q99447 389 aa16.37■□□□□ 0.21
SEC13-212ENST00000432213 LRFN3Q9BTN0 628 aa16.37■□□□□ 0.21
SEC13-212ENST00000432213 RC3H2Q9HBD1 1191 aaKnown RBP16.37■□□□□ 0.21
SEC13-212ENST00000432213 LMCD1Q9NZU5 365 aa16.37■□□□□ 0.21
SEC13-212ENST00000432213 EVPLQ92817 2033 aa16.36■□□□□ 0.21
SEC13-212ENST00000432213 FNDC1Q4ZHG4 1894 aaPredicted RBP16.36■□□□□ 0.21
SEC13-212ENST00000432213 EFCAB14O75071 495 aa16.36■□□□□ 0.21
SEC13-212ENST00000432213 GHRP10912 638 aa16.36■□□□□ 0.21
SEC13-212ENST00000432213 KCNA5P22460 613 aa16.36■□□□□ 0.21
SEC13-212ENST00000432213 GNPTABQ3T906 1256 aa16.36■□□□□ 0.21
SEC13-212ENST00000432213 CTCFLQ8NI51 663 aaPredicted RBP16.36■□□□□ 0.21
SEC13-212ENST00000432213 CYP2W1Q8TAV3 490 aa16.36■□□□□ 0.21
SEC13-212ENST00000432213 SEPT8Q92599 483 aa16.36■□□□□ 0.21
SEC13-212ENST00000432213 PGBD1Q96JS3 809 aa16.36■□□□□ 0.21
SEC13-212ENST00000432213 USP26Q9BXU7 913 aa16.36■□□□□ 0.21
SEC13-212ENST00000432213 UBIAD1Q9Y5Z9 338 aa16.36■□□□□ 0.21
SEC13-212ENST00000432213 H3BQ06 376 aaPredicted RBP16.35■□□□□ 0.21
SEC13-212ENST00000432213 ADAMTS3O15072 1205 aa16.35■□□□□ 0.21
SEC13-212ENST00000432213 STAM2O75886 525 aa16.35■□□□□ 0.21
SEC13-212ENST00000432213 LPIN1Q14693 890 aa16.35■□□□□ 0.21
SEC13-212ENST00000432213 SART3Q15020 963 aaKnown RBP16.35■□□□□ 0.21
SEC13-212ENST00000432213 TCEAL5Q5H9L2 206 aa16.35■□□□□ 0.21
SEC13-212ENST00000432213 TCEANC2Q96MN5 208 aa16.35■□□□□ 0.21
SEC13-212ENST00000432213 MAP3K14Q99558 947 aa16.35■□□□□ 0.21
SEC13-212ENST00000432213 IFIH1Q9BYX4 1025 aaKnown RBP16.35■□□□□ 0.21
SEC13-212ENST00000432213 EHMT1Q9H9B1 1298 aa16.35■□□□□ 0.21
SEC13-212ENST00000432213 CSPG5O95196 566 aa16.34■□□□□ 0.21
SEC13-212ENST00000432213 LEXMQ3ZCV2 418 aa16.34■□□□□ 0.21
SEC13-212ENST00000432213 CREB3L3Q68CJ9 461 aa16.34■□□□□ 0.21
SEC13-212ENST00000432213 TMTC3Q6ZXV5 915 aa16.34■□□□□ 0.21
SEC13-212ENST00000432213 TMEM192Q8IY95 271 aa16.34■□□□□ 0.21
SEC13-212ENST00000432213 TRAPPC12Q8WVT3 735 aa16.34■□□□□ 0.21
SEC13-212ENST00000432213 MRPL38Q96DV4 380 aaKnown RBP16.34■□□□□ 0.21
SEC13-212ENST00000432213 YME1L1Q96TA2 773 aa16.34■□□□□ 0.21
SEC13-212ENST00000432213 SENP7Q9BQF6 1050 aa16.34■□□□□ 0.21
SEC13-212ENST00000432213 ESYT1Q9BSJ8 1104 aa16.34■□□□□ 0.21
SEC13-212ENST00000432213 AGO3Q9H9G7 860 aaKnown RBP16.34■□□□□ 0.21
SEC13-212ENST00000432213 CNTNAP5Q8WYK1 1306 aa16.34■□□□□ 0.21
SEC13-212ENST00000432213 MBLAC1A4D2B0 266 aaPredicted RBP16.33■□□□□ 0.2
SEC13-212ENST00000432213 H3BNC9 293 aa16.33■□□□□ 0.2
SEC13-212ENST00000432213 CAND2O75155 1236 aa16.33■□□□□ 0.2
SEC13-212ENST00000432213 GPM6BQ13491 265 aa16.33■□□□□ 0.2
SEC13-212ENST00000432213 NECTIN1Q15223 517 aa16.33■□□□□ 0.2
SEC13-212ENST00000432213 GRIK4Q16099 956 aa16.33■□□□□ 0.2
SEC13-212ENST00000432213 WWC2Q6AWC2 1192 aa16.33■□□□□ 0.2
SEC13-212ENST00000432213 NFXL1Q6ZNB6 911 aa16.33■□□□□ 0.2
SEC13-212ENST00000432213 DNAJB3Q8WWF6 145 aa16.33■□□□□ 0.2
SEC13-212ENST00000432213 GPRASP2Q96D09 838 aa16.33■□□□□ 0.2
SEC13-212ENST00000432213 PSTPIP2Q9H939 334 aa16.33■□□□□ 0.2
SEC13-212ENST00000432213 PCDHA6Q9UN73 950 aa16.33■□□□□ 0.2
SEC13-212ENST00000432213 PCDHA8Q9Y5H6 950 aa16.33■□□□□ 0.2
SEC13-212ENST00000432213 GRM6O15303 877 aa16.32■□□□□ 0.2
SEC13-212ENST00000432213 SMARCA1P28370 1054 aa16.32■□□□□ 0.2
SEC13-212ENST00000432213 KIF5BP33176 963 aa16.32■□□□□ 0.2
SEC13-212ENST00000432213 MCM5P33992 734 aa16.32■□□□□ 0.2
SEC13-212ENST00000432213 GTF2F1P35269 517 aaKnown RBP eCLIP16.32■□□□□ 0.2
SEC13-212ENST00000432213 LTBRP36941 435 aa16.32■□□□□ 0.2
SEC13-212ENST00000432213 PLA2G5P39877 138 aa16.32■□□□□ 0.2
SEC13-212ENST00000432213 IGBP1P78318 339 aa16.32■□□□□ 0.2
SEC13-212ENST00000432213 TMEM62Q0P6H9 643 aa16.32■□□□□ 0.2
SEC13-212ENST00000432213 FUT2Q10981 343 aa16.32■□□□□ 0.2
SEC13-212ENST00000432213 TRAF1Q13077 416 aa16.32■□□□□ 0.2
SEC13-212ENST00000432213 PPFIA1Q13136 1202 aa16.32■□□□□ 0.2
SEC13-212ENST00000432213 FBXO47Q5MNV8 452 aa16.32■□□□□ 0.2
SEC13-212ENST00000432213 CASC1Q6TDU7 716 aa16.32■□□□□ 0.2
SEC13-212ENST00000432213 RTN4RL1Q86UN2 441 aaPredicted RBP16.32■□□□□ 0.2
SEC13-212ENST00000432213 MICU3Q86XE3 530 aa16.32■□□□□ 0.2
SEC13-212ENST00000432213 FAM178BQ8IXR5 827 aa16.32■□□□□ 0.2
SEC13-212ENST00000432213 NEK9Q8TD19 979 aa16.32■□□□□ 0.2
SEC13-212ENST00000432213 CUL5Q93034 780 aa16.32■□□□□ 0.2
SEC13-212ENST00000432213 TMEM260Q9NX78 707 aa16.32■□□□□ 0.2
SEC13-212ENST00000432213 SEC63Q9UGP8 760 aaKnown RBP16.32■□□□□ 0.2
SEC13-212ENST00000432213 TUBE1Q9UJT0 475 aa16.32■□□□□ 0.2
SEC13-212ENST00000432213 ZNF215Q9UL58 517 aaPredicted RBP16.32■□□□□ 0.2
SEC13-212ENST00000432213 BRPF3Q9ULD4 1205 aa16.32■□□□□ 0.2
SEC13-212ENST00000432213 CDY2AQ9Y6F7 541 aa16.32■□□□□ 0.2
SEC13-212ENST00000432213 NRCAMQ92823 1304 aa16.31■□□□□ 0.2
SEC13-212ENST00000432213 CCDC69A6NI79 296 aa16.31■□□□□ 0.2
SEC13-212ENST00000432213 ARP10275 920 aa16.31■□□□□ 0.2
SEC13-212ENST00000432213 DLX2Q07687 328 aaPredicted RBP16.31■□□□□ 0.2
SEC13-212ENST00000432213 ITGB3BPQ13352 177 aaPredicted RBP16.31■□□□□ 0.2
SEC13-212ENST00000432213 MTMR1Q13613 665 aa16.31■□□□□ 0.2
SEC13-212ENST00000432213 CAMK1Q14012 370 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms