RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 NOX5Q96PH1 765 aa12.55□□□□□ -0.4
CLDN4-202ENST00000431918 ADAMTS1Q9UHI8 967 aa12.55□□□□□ -0.4
CLDN4-202ENST00000431918 EIF2AK2P19525 551 aaKnown RBP12.55□□□□□ -0.4
CLDN4-202ENST00000431918 GFPT1Q06210 699 aaPredicted RBP12.55□□□□□ -0.4
CLDN4-202ENST00000431918 ORC2Q13416 577 aaPredicted RBP12.55□□□□□ -0.4
CLDN4-202ENST00000431918 SLC15A2Q16348 729 aa12.55□□□□□ -0.4
CLDN4-202ENST00000431918 KIAA0753Q2KHM9 967 aa12.55□□□□□ -0.4
CLDN4-202ENST00000431918 PPP4R3AQ6IN85 833 aa12.55□□□□□ -0.4
CLDN4-202ENST00000431918 DYDC2Q96IM9 177 aa12.55□□□□□ -0.4
CLDN4-202ENST00000431918 DUSP10Q9Y6W6 482 aa12.55□□□□□ -0.4
CLDN4-202ENST00000431918 CHD4Q14839 1912 aa12.55□□□□□ -0.4
CLDN4-202ENST00000431918 SMC1AQ14683 1233 aaKnown RBP12.54□□□□□ -0.4
CLDN4-202ENST00000431918 LONRF2Q1L5Z9 754 aa12.54□□□□□ -0.4
CLDN4-202ENST00000431918 IRF2BP1Q8IU81 584 aa12.54□□□□□ -0.4
CLDN4-202ENST00000431918 IFT81Q8WYA0 676 aa12.54□□□□□ -0.4
CLDN4-202ENST00000431918 HOOK2Q96ED9 719 aa12.54□□□□□ -0.4
CLDN4-202ENST00000431918 CWC15Q9P013 229 aaKnown RBP12.54□□□□□ -0.4
CLDN4-202ENST00000431918 ABCB11O95342 1321 aa12.54□□□□□ -0.4
CLDN4-202ENST00000431918 ATP1A1P05023 1023 aaKnown RBP12.54□□□□□ -0.4
CLDN4-202ENST00000431918 POLD1P28340 1107 aa12.54□□□□□ -0.4
CLDN4-202ENST00000431918 EXOC3L4Q17RC7 722 aa12.54□□□□□ -0.4
CLDN4-202ENST00000431918 TMEM132AQ24JP5 1023 aa12.54□□□□□ -0.4
CLDN4-202ENST00000431918 BICD1Q96G01 975 aa12.54□□□□□ -0.4
CLDN4-202ENST00000431918 MTMR9Q96QG7 549 aa12.54□□□□□ -0.4
CLDN4-202ENST00000431918 ZNF70Q9UC06 446 aaPredicted RBP12.54□□□□□ -0.4
CLDN4-202ENST00000431918 PCDHA13Q9Y5I0 950 aa12.54□□□□□ -0.4
CLDN4-202ENST00000431918 GNA14O95837 355 aa12.54□□□□□ -0.4
CLDN4-202ENST00000431918 PSMC6P62333 389 aa12.54□□□□□ -0.4
CLDN4-202ENST00000431918 CETN1Q12798 172 aa12.54□□□□□ -0.4
CLDN4-202ENST00000431918 HDXQ7Z353 690 aa12.54□□□□□ -0.4
CLDN4-202ENST00000431918 CATSPER3Q86XQ3 398 aa12.54□□□□□ -0.4
CLDN4-202ENST00000431918 SNED1Q8TER0 1413 aa12.54□□□□□ -0.4
CLDN4-202ENST00000431918 PPARDQ03181 441 aa12.53□□□□□ -0.4
CLDN4-202ENST00000431918 STYK1Q6J9G0 422 aa12.53□□□□□ -0.4
CLDN4-202ENST00000431918 RTKN2Q8IZC4 609 aa12.53□□□□□ -0.4
CLDN4-202ENST00000431918 TRIM58Q8NG06 486 aa12.53□□□□□ -0.4
CLDN4-202ENST00000431918 EIF2AK1Q9BQI3 630 aaKnown RBP12.53□□□□□ -0.4
CLDN4-202ENST00000431918 TEKT3Q9BXF9 490 aa12.53□□□□□ -0.4
CLDN4-202ENST00000431918 PCIF1Q9H4Z3 704 aa12.53□□□□□ -0.4
CLDN4-202ENST00000431918 RSPH10B2B2RC85 870 aa12.53□□□□□ -0.4
CLDN4-202ENST00000431918 BACH1O14867 736 aa12.53□□□□□ -0.4
CLDN4-202ENST00000431918 RSPH10BP0C881 870 aa12.53□□□□□ -0.4
CLDN4-202ENST00000431918 KSR1Q8IVT5 923 aa12.53□□□□□ -0.4
CLDN4-202ENST00000431918 HAS1Q92839 578 aa12.53□□□□□ -0.4
CLDN4-202ENST00000431918 REEP2Q9BRK0 252 aa12.53□□□□□ -0.4
CLDN4-202ENST00000431918 ZCCHC17Q9NP64 241 aaKnown RBP12.53□□□□□ -0.4
CLDN4-202ENST00000431918 TMEM110-MUSTN1A8MSY1 372 aa12.53□□□□□ -0.4
CLDN4-202ENST00000431918 K7ENM7 598 aa12.53□□□□□ -0.4
CLDN4-202ENST00000431918 DPEP1P16444 411 aa12.53□□□□□ -0.4
CLDN4-202ENST00000431918 SLC20A2Q08357 652 aa12.53□□□□□ -0.4
CLDN4-202ENST00000431918 C2orf54Q08AI8 447 aa12.53□□□□□ -0.4
CLDN4-202ENST00000431918 KCNH2Q12809 1159 aa12.53□□□□□ -0.4
CLDN4-202ENST00000431918 TUBB2AQ13885 445 aa12.53□□□□□ -0.4
CLDN4-202ENST00000431918 CCDC170Q8IYT3 715 aa12.53□□□□□ -0.4
CLDN4-202ENST00000431918 TUBB2BQ9BVA1 445 aa12.53□□□□□ -0.4
CLDN4-202ENST00000431918 LACRTQ9GZZ8 138 aa12.53□□□□□ -0.4
CLDN4-202ENST00000431918 DNAJC18Q9H819 358 aa12.53□□□□□ -0.4
CLDN4-202ENST00000431918 EFCC1Q9HA90 598 aa12.53□□□□□ -0.4
CLDN4-202ENST00000431918 RAVER2Q9HCJ3 691 aaKnown RBP12.53□□□□□ -0.4
CLDN4-202ENST00000431918 CACNA1SQ13698 1873 aa12.52□□□□□ -0.4
CLDN4-202ENST00000431918 ZNF185O15231 689 aa12.52□□□□□ -0.4
CLDN4-202ENST00000431918 FTCDO95954 541 aa12.52□□□□□ -0.4
CLDN4-202ENST00000431918 ABCB4P21439 1286 aa12.52□□□□□ -0.4
CLDN4-202ENST00000431918 VAV2P52735 878 aa12.52□□□□□ -0.4
CLDN4-202ENST00000431918 APBA1Q02410 837 aa12.52□□□□□ -0.4
CLDN4-202ENST00000431918 ECM1Q16610 540 aa12.52□□□□□ -0.4
CLDN4-202ENST00000431918 PRAMEF18Q5VWM3 479 aa12.52□□□□□ -0.4
CLDN4-202ENST00000431918 RSBN1LQ6PCB5 846 aaPredicted RBP12.52□□□□□ -0.4
CLDN4-202ENST00000431918 LEKR1Q6ZMV7 388 aa12.52□□□□□ -0.4
CLDN4-202ENST00000431918 MYO1AQ9UBC5 1043 aa12.52□□□□□ -0.4
CLDN4-202ENST00000431918 C4AP0C0L4 1744 aa12.52□□□□□ -0.4
CLDN4-202ENST00000431918 C4BP0C0L5 1744 aa12.52□□□□□ -0.4
CLDN4-202ENST00000431918 M0R2N6 131 aa12.52□□□□□ -0.4
CLDN4-202ENST00000431918 ENTPD3O75355 529 aa12.52□□□□□ -0.4
CLDN4-202ENST00000431918 CYP11B2P19099 503 aa12.52□□□□□ -0.4
CLDN4-202ENST00000431918 MCM3P25205 808 aa12.52□□□□□ -0.4
CLDN4-202ENST00000431918 NMT1P30419 496 aaKnown RBP12.52□□□□□ -0.4
CLDN4-202ENST00000431918 GYS2P54840 703 aa12.52□□□□□ -0.4
CLDN4-202ENST00000431918 HNRNPH2P55795 449 aaKnown RBP12.52□□□□□ -0.4
CLDN4-202ENST00000431918 EHHADHQ08426 723 aa12.52□□□□□ -0.4
CLDN4-202ENST00000431918 CIAPIN1Q6FI81 312 aa12.52□□□□□ -0.4
CLDN4-202ENST00000431918 APTXQ7Z2E3 356 aaKnown RBP12.52□□□□□ -0.4
CLDN4-202ENST00000431918 LRRC15Q8TF66 581 aa12.52□□□□□ -0.4
CLDN4-202ENST00000431918 MYCBPQ99417 103 aaPredicted RBP12.52□□□□□ -0.4
CLDN4-202ENST00000431918 EHD4Q9H223 541 aa12.52□□□□□ -0.4
CLDN4-202ENST00000431918 PICK1Q9NRD5 415 aa12.52□□□□□ -0.4
CLDN4-202ENST00000431918 LRRC10BA6NIK2 292 aa12.52□□□□□ -0.41
CLDN4-202ENST00000431918 NCK2O43639 380 aa12.52□□□□□ -0.41
CLDN4-202ENST00000431918 MYBP10242 640 aa12.52□□□□□ -0.41
CLDN4-202ENST00000431918 TTLL12Q14166 644 aaPredicted RBP12.52□□□□□ -0.41
CLDN4-202ENST00000431918 MCTP2Q6DN12 878 aa12.52□□□□□ -0.41
CLDN4-202ENST00000431918 CENPPQ6IPU0 288 aa12.52□□□□□ -0.41
CLDN4-202ENST00000431918 LDHDQ86WU2 507 aa12.52□□□□□ -0.41
CLDN4-202ENST00000431918 U2AF1L4Q8WU68 220 aaKnown RBP12.52□□□□□ -0.41
CLDN4-202ENST00000431918 BCCIPQ9P287 314 aaKnown RBP eCLIP12.52□□□□□ -0.41
CLDN4-202ENST00000431918 HERC5Q9UII4 1024 aaKnown RBP12.52□□□□□ -0.41
CLDN4-202ENST00000431918 DDX60Q8IY21 1712 aaKnown RBP12.52□□□□□ -0.41
CLDN4-202ENST00000431918 PLSCR1O15162 318 aa12.52□□□□□ -0.41
CLDN4-202ENST00000431918 ASNSP08243 561 aa12.52□□□□□ -0.41
CLDN4-202ENST00000431918 ACTN1P12814 892 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms