RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 PHF20Q9BVI0 1012 aa16.21■□□□□ 0.19
LAMA4-208ENST00000431543 NOC4LQ9BVI4 516 aaKnown RBP16.21■□□□□ 0.19
LAMA4-208ENST00000431543 SEZ6LQ9BYH1 1024 aa16.21■□□□□ 0.19
LAMA4-208ENST00000431543 PCDHA4Q9UN74 947 aa16.21■□□□□ 0.19
LAMA4-208ENST00000431543 LAMA2P24043 3122 aaKnown RBP16.2■□□□□ 0.18
LAMA4-208ENST00000431543 GSTTP1A0A1W2PQM5 241 aa16.2■□□□□ 0.18
LAMA4-208ENST00000431543 M0R2N6 131 aa16.2■□□□□ 0.18
LAMA4-208ENST00000431543 NOP56O00567 594 aaKnown RBP16.2■□□□□ 0.18
LAMA4-208ENST00000431543 F2P00734 622 aa16.2■□□□□ 0.18
LAMA4-208ENST00000431543 LGALS2P05162 132 aa16.2■□□□□ 0.18
LAMA4-208ENST00000431543 CYP3A4P08684 503 aa16.2■□□□□ 0.18
LAMA4-208ENST00000431543 DDIT3P35638 169 aa16.2■□□□□ 0.18
LAMA4-208ENST00000431543 ITGB3BPQ13352 177 aaPredicted RBP16.2■□□□□ 0.18
LAMA4-208ENST00000431543 C9orf50Q5SZB4 431 aa16.2■□□□□ 0.18
LAMA4-208ENST00000431543 UTP14CQ5TAP6 766 aaKnown RBP16.2■□□□□ 0.18
LAMA4-208ENST00000431543 GDF6Q6KF10 455 aaPredicted RBP16.2■□□□□ 0.18
LAMA4-208ENST00000431543 TRIM50Q86XT4 487 aa16.2■□□□□ 0.18
LAMA4-208ENST00000431543 BLIDQ8IZY5 108 aa16.2■□□□□ 0.18
LAMA4-208ENST00000431543 CDHR1Q96JP9 859 aa16.2■□□□□ 0.18
LAMA4-208ENST00000431543 FOXP1Q9H334 677 aaPredicted RBP16.2■□□□□ 0.18
LAMA4-208ENST00000431543 AGO4Q9HCK5 861 aaKnown RBP16.2■□□□□ 0.18
LAMA4-208ENST00000431543 HDAC6Q9UBN7 1215 aa16.2■□□□□ 0.18
LAMA4-208ENST00000431543 MTMR6Q9Y217 621 aa16.2■□□□□ 0.18
LAMA4-208ENST00000431543 IGLV3-22A0A075B6J6 115 aa16.19■□□□□ 0.18
LAMA4-208ENST00000431543 MAFGO15525 162 aa16.19■□□□□ 0.18
LAMA4-208ENST00000431543 BRD1O95696 1058 aa16.19■□□□□ 0.18
LAMA4-208ENST00000431543 FXR1P51114 621 aaKnown RBP eCLIP16.19■□□□□ 0.18
LAMA4-208ENST00000431543 CCL23P55773 120 aa16.19■□□□□ 0.18
LAMA4-208ENST00000431543 ZNF200P98182 395 aaPredicted RBP16.19■□□□□ 0.18
LAMA4-208ENST00000431543 PTPN11Q06124 597 aaPredicted RBP16.19■□□□□ 0.18
LAMA4-208ENST00000431543 SHHQ15465 462 aa16.19■□□□□ 0.18
LAMA4-208ENST00000431543 MFSD5Q6N075 450 aa16.19■□□□□ 0.18
LAMA4-208ENST00000431543 DIS3L2Q8IYB7 885 aaKnown RBP16.19■□□□□ 0.18
LAMA4-208ENST00000431543 GIMAP8Q8ND71 665 aaPredicted RBP16.19■□□□□ 0.18
LAMA4-208ENST00000431543 HIPK3Q9H422 1215 aa16.19■□□□□ 0.18
LAMA4-208ENST00000431543 H3BRB1 525 aa16.18■□□□□ 0.18
LAMA4-208ENST00000431543 SOX1O00570 391 aaPredicted RBP16.18■□□□□ 0.18
LAMA4-208ENST00000431543 CSF2RAP15509 400 aa16.18■□□□□ 0.18
LAMA4-208ENST00000431543 TCF7P36402 384 aaPredicted RBP16.18■□□□□ 0.18
LAMA4-208ENST00000431543 FPGSQ05932 587 aa16.18■□□□□ 0.18
LAMA4-208ENST00000431543 PTGISQ16647 500 aa16.18■□□□□ 0.18
LAMA4-208ENST00000431543 C16orf59Q7L2K0 433 aa16.18■□□□□ 0.18
LAMA4-208ENST00000431543 BRAPQ7Z569 592 aa16.18■□□□□ 0.18
LAMA4-208ENST00000431543 SESTD1Q86VW0 696 aa16.18■□□□□ 0.18
LAMA4-208ENST00000431543 PLA2G4DQ86XP0 818 aa16.18■□□□□ 0.18
LAMA4-208ENST00000431543 TDHQ8IZJ6 230 aa16.18■□□□□ 0.18
LAMA4-208ENST00000431543 C7orf31Q8N865 590 aa16.18■□□□□ 0.18
LAMA4-208ENST00000431543 DAGLBQ8NCG7 672 aa16.18■□□□□ 0.18
LAMA4-208ENST00000431543 OXER1Q8TDS5 423 aa16.18■□□□□ 0.18
LAMA4-208ENST00000431543 WNT8AQ9H1J5 351 aa16.18■□□□□ 0.18
LAMA4-208ENST00000431543 TUT1Q9H6E5 874 aaKnown RBP16.18■□□□□ 0.18
LAMA4-208ENST00000431543 CCDC194A0A1B0GVG4 234 aa16.17■□□□□ 0.18
LAMA4-208ENST00000431543 A0A1W2PPC1 479 aa16.17■□□□□ 0.18
LAMA4-208ENST00000431543 DHX15O43143 795 aaKnown RBP16.17■□□□□ 0.18
LAMA4-208ENST00000431543 F13A1P00488 732 aa16.17■□□□□ 0.18
LAMA4-208ENST00000431543 SUPT20HL2P0C7V6 817 aa16.17■□□□□ 0.18
LAMA4-208ENST00000431543 ACRP10323 421 aa16.17■□□□□ 0.18
LAMA4-208ENST00000431543 FOXD4L5Q5VV16 416 aaPredicted RBP16.17■□□□□ 0.18
LAMA4-208ENST00000431543 NIPA1Q7RTP0 329 aa16.17■□□□□ 0.18
LAMA4-208ENST00000431543 TBCKQ8TEA7 893 aa16.17■□□□□ 0.18
LAMA4-208ENST00000431543 FOXD4L4Q8WXT5 416 aaPredicted RBP16.17■□□□□ 0.18
LAMA4-208ENST00000431543 SEPT1Q8WYJ6 367 aa16.17■□□□□ 0.18
LAMA4-208ENST00000431543 SCLYQ96I15 445 aa16.17■□□□□ 0.18
LAMA4-208ENST00000431543 KATNAL1Q9BW62 490 aa16.17■□□□□ 0.18
LAMA4-208ENST00000431543 RNPEPQ9H4A4 650 aa16.17■□□□□ 0.18
LAMA4-208ENST00000431543 GTF2IRD1Q9UHL9 959 aa16.17■□□□□ 0.18
LAMA4-208ENST00000431543 BTBD18B2RXH4 712 aa16.16■□□□□ 0.18
LAMA4-208ENST00000431543 DDX39AO00148 427 aaKnown RBP16.16■□□□□ 0.18
LAMA4-208ENST00000431543 U2AF2P26368 475 aaKnown RBP eCLIP16.16■□□□□ 0.18
LAMA4-208ENST00000431543 CIITAP33076 1130 aa16.16■□□□□ 0.18
LAMA4-208ENST00000431543 PRR16Q569H4 304 aa16.16■□□□□ 0.18
LAMA4-208ENST00000431543 KRT25Q7Z3Z0 450 aa16.16■□□□□ 0.18
LAMA4-208ENST00000431543 NOSTRINQ8IVI9 506 aa16.16■□□□□ 0.18
LAMA4-208ENST00000431543 DHX38Q92620 1227 aaKnown RBP16.16■□□□□ 0.18
LAMA4-208ENST00000431543 WNT8BQ93098 351 aa16.16■□□□□ 0.18
LAMA4-208ENST00000431543 VWCEQ96DN2 955 aa16.16■□□□□ 0.18
LAMA4-208ENST00000431543 PCYT2Q99447 389 aa16.16■□□□□ 0.18
LAMA4-208ENST00000431543 JPH1Q9HDC5 661 aaPredicted RBP16.16■□□□□ 0.18
LAMA4-208ENST00000431543 SLC9A2Q9UBY0 812 aa16.16■□□□□ 0.18
LAMA4-208ENST00000431543 NOL7Q9UMY1 257 aaKnown RBP16.16■□□□□ 0.18
LAMA4-208ENST00000431543 NOD1Q9Y239 953 aa16.16■□□□□ 0.18
LAMA4-208ENST00000431543 NFASCO94856 1347 aa16.16■□□□□ 0.18
LAMA4-208ENST00000431543 CCNE2O96020 404 aa16.15■□□□□ 0.18
LAMA4-208ENST00000431543 SMIM10L2AP0DMW4 78 aa16.15■□□□□ 0.18
LAMA4-208ENST00000431543 SMIM10L2BP0DMW5 78 aa16.15■□□□□ 0.18
LAMA4-208ENST00000431543 USP11P51784 963 aa16.15■□□□□ 0.18
LAMA4-208ENST00000431543 ACTR2P61160 394 aa16.15■□□□□ 0.18
LAMA4-208ENST00000431543 EARS2Q5JPH6 523 aaKnown RBP16.15■□□□□ 0.18
LAMA4-208ENST00000431543 FERMT3Q86UX7 667 aa16.15■□□□□ 0.18
LAMA4-208ENST00000431543 TMEM199Q8N511 208 aa16.15■□□□□ 0.18
LAMA4-208ENST00000431543 GJA10Q969M2 543 aa16.15■□□□□ 0.18
LAMA4-208ENST00000431543 LENG9Q96B70 501 aa16.15■□□□□ 0.18
LAMA4-208ENST00000431543 LRCH3Q96II8 777 aa16.15■□□□□ 0.18
LAMA4-208ENST00000431543 ZNF396Q96N95 335 aaPredicted RBP16.15■□□□□ 0.18
LAMA4-208ENST00000431543 SDF4Q9BRK5 362 aa16.15■□□□□ 0.18
LAMA4-208ENST00000431543 SETD4Q9NVD3 440 aa16.15■□□□□ 0.18
LAMA4-208ENST00000431543 LAMA3Q16787 3333 aa16.15■□□□□ 0.18
LAMA4-208ENST00000431543 TRIP12Q14669 1992 aaPredicted RBP16.15■□□□□ 0.18
LAMA4-208ENST00000431543 IPO5O00410 1097 aaKnown RBP16.14■□□□□ 0.17
LAMA4-208ENST00000431543 TDP2O95551 362 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms