RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 FAM86B2P0C5J1 330 aa11.17□□□□□ -0.62
HDAC6-207ENST00000430858 SELPP16109 830 aa11.17□□□□□ -0.62
HDAC6-207ENST00000430858 XBP1P17861 261 aa11.17□□□□□ -0.62
HDAC6-207ENST00000430858 HOXC8P31273 242 aa11.17□□□□□ -0.62
HDAC6-207ENST00000430858 CIITAP33076 1130 aa11.17□□□□□ -0.62
HDAC6-207ENST00000430858 ZNF200P98182 395 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-207ENST00000430858 FAM109BQ6ICB4 259 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-207ENST00000430858 TRIM50Q86XT4 487 aa11.17□□□□□ -0.62
HDAC6-207ENST00000430858 DAGLBQ8NCG7 672 aa11.17□□□□□ -0.62
HDAC6-207ENST00000430858 RASGRP4Q8TDF6 673 aa11.17□□□□□ -0.62
HDAC6-207ENST00000430858 DHX38Q92620 1227 aaKnown RBP11.17□□□□□ -0.62
HDAC6-207ENST00000430858 RNPEPQ9H4A4 650 aa11.17□□□□□ -0.62
HDAC6-207ENST00000430858 SMARCAD1Q9H4L7 1026 aa11.17□□□□□ -0.62
HDAC6-207ENST00000430858 ERAP1Q9NZ08 941 aa11.17□□□□□ -0.62
HDAC6-207ENST00000430858 PCDHA4Q9UN74 947 aa11.17□□□□□ -0.62
HDAC6-207ENST00000430858 TELO2Q9Y4R8 837 aa11.17□□□□□ -0.62
HDAC6-207ENST00000430858 EMSYQ7Z589 1322 aa11.16□□□□□ -0.62
HDAC6-207ENST00000430858 NRCAMQ92823 1304 aa11.16□□□□□ -0.62
HDAC6-207ENST00000430858 MYH7BA7E2Y1 1941 aa11.16□□□□□ -0.62
HDAC6-207ENST00000430858 IGLV3-22A0A075B6J6 115 aa11.16□□□□□ -0.62
HDAC6-207ENST00000430858 LGR5O75473 907 aa11.16□□□□□ -0.62
HDAC6-207ENST00000430858 CKBP12277 381 aa11.16□□□□□ -0.62
HDAC6-207ENST00000430858 USP11P51784 963 aa11.16□□□□□ -0.62
HDAC6-207ENST00000430858 ACTR2P61160 394 aa11.16□□□□□ -0.62
HDAC6-207ENST00000430858 ITGB3BPQ13352 177 aaPredicted RBP11.16□□□□□ -0.62
HDAC6-207ENST00000430858 HIC1Q14526 733 aa11.16□□□□□ -0.62
HDAC6-207ENST00000430858 ME3Q16798 604 aa11.16□□□□□ -0.62
HDAC6-207ENST00000430858 LRRC8DQ7L1W4 858 aa11.16□□□□□ -0.62
HDAC6-207ENST00000430858 OTOP2Q7RTS6 562 aa11.16□□□□□ -0.62
HDAC6-207ENST00000430858 DEFB128Q7Z7B8 93 aa11.16□□□□□ -0.62
HDAC6-207ENST00000430858 SERINC5Q86VE9 423 aa11.16□□□□□ -0.62
HDAC6-207ENST00000430858 BLIDQ8IZY5 108 aa11.16□□□□□ -0.62
HDAC6-207ENST00000430858 DEFB123Q8N688 67 aa11.16□□□□□ -0.62
HDAC6-207ENST00000430858 WASF1Q92558 559 aa11.16□□□□□ -0.62
HDAC6-207ENST00000430858 GLG1Q92896 1179 aa11.16□□□□□ -0.62
HDAC6-207ENST00000430858 TNPO1Q92973 898 aaKnown RBP11.16□□□□□ -0.62
HDAC6-207ENST00000430858 ATP6V0A1Q93050 837 aa11.16□□□□□ -0.62
HDAC6-207ENST00000430858 GTF3C6Q969F1 213 aa11.16□□□□□ -0.62
HDAC6-207ENST00000430858 AZI2Q9H6S1 392 aa11.16□□□□□ -0.62
HDAC6-207ENST00000430858 M0R2N6 131 aa11.15□□□□□ -0.62
HDAC6-207ENST00000430858 IPO5O00410 1097 aaKnown RBP11.15□□□□□ -0.62
HDAC6-207ENST00000430858 TREHO43280 583 aa11.15□□□□□ -0.62
HDAC6-207ENST00000430858 CAND2O75155 1236 aa11.15□□□□□ -0.62
HDAC6-207ENST00000430858 ATG7O95352 703 aa11.15□□□□□ -0.62
HDAC6-207ENST00000430858 CTDNEP1O95476 244 aa11.15□□□□□ -0.62
HDAC6-207ENST00000430858 ACTN1P12814 892 aa11.15□□□□□ -0.62
HDAC6-207ENST00000430858 TRIM71Q2Q1W2 868 aaKnown RBP11.15□□□□□ -0.62
HDAC6-207ENST00000430858 PRR16Q569H4 304 aa11.15□□□□□ -0.62
HDAC6-207ENST00000430858 ZNF697Q5TEC3 545 aa11.15□□□□□ -0.62
HDAC6-207ENST00000430858 NECAB1Q8N987 351 aa11.15□□□□□ -0.62
HDAC6-207ENST00000430858 VWCEQ96DN2 955 aa11.15□□□□□ -0.62
HDAC6-207ENST00000430858 AIFM3Q96NN9 605 aa11.15□□□□□ -0.62
HDAC6-207ENST00000430858 ZNF577Q9BSK1 485 aa11.15□□□□□ -0.62
HDAC6-207ENST00000430858 PHF20Q9BVI0 1012 aa11.15□□□□□ -0.62
HDAC6-207ENST00000430858 FTOQ9C0B1 505 aaKnown RBP eCLIP11.15□□□□□ -0.62
HDAC6-207ENST00000430858 TBC1D22BQ9NU19 505 aa11.15□□□□□ -0.62
HDAC6-207ENST00000430858 SETD4Q9NVD3 440 aa11.15□□□□□ -0.62
HDAC6-207ENST00000430858 ORC3Q9UBD5 711 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-207ENST00000430858 TMEM265A0A087WTH1 108 aa11.14□□□□□ -0.63
HDAC6-207ENST00000430858 DHX15O43143 795 aaKnown RBP11.14□□□□□ -0.63
HDAC6-207ENST00000430858 LARGE1O95461 756 aa11.14□□□□□ -0.63
HDAC6-207ENST00000430858 MARK3P27448 753 aa11.14□□□□□ -0.63
HDAC6-207ENST00000430858 THPOP40225 353 aa11.14□□□□□ -0.63
HDAC6-207ENST00000430858 RBM25P49756 843 aaKnown RBP11.14□□□□□ -0.63
HDAC6-207ENST00000430858 SLC26A2P50443 739 aa11.14□□□□□ -0.63
HDAC6-207ENST00000430858 STAT5BP51692 787 aa11.14□□□□□ -0.63
HDAC6-207ENST00000430858 ADAM17P78536 824 aa11.14□□□□□ -0.63
HDAC6-207ENST00000430858 PPFIA1Q13136 1202 aa11.14□□□□□ -0.63
HDAC6-207ENST00000430858 NPY5RQ15761 445 aa11.14□□□□□ -0.63
HDAC6-207ENST00000430858 ZNF618Q5T7W0 954 aa11.14□□□□□ -0.63
HDAC6-207ENST00000430858 MOXD1Q6UVY6 613 aa11.14□□□□□ -0.63
HDAC6-207ENST00000430858 Q7L0L9 218 aa11.14□□□□□ -0.63
HDAC6-207ENST00000430858 PLPPR4Q7Z2D5 763 aa11.14□□□□□ -0.63
HDAC6-207ENST00000430858 KRT25Q7Z3Z0 450 aa11.14□□□□□ -0.63
HDAC6-207ENST00000430858 TBCKQ8TEA7 893 aa11.14□□□□□ -0.63
HDAC6-207ENST00000430858 LMBR1Q8WVP7 490 aa11.14□□□□□ -0.63
HDAC6-207ENST00000430858 WNT8BQ93098 351 aa11.14□□□□□ -0.63
HDAC6-207ENST00000430858 PCYT2Q99447 389 aa11.14□□□□□ -0.63
HDAC6-207ENST00000430858 MTMR10Q9NXD2 777 aa11.14□□□□□ -0.63
HDAC6-207ENST00000430858 CXXC1Q9P0U4 656 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-207ENST00000430858 TCEAL9Q9UHQ7 104 aa11.14□□□□□ -0.63
HDAC6-207ENST00000430858 KCNJ14Q9UNX9 436 aa11.14□□□□□ -0.63
HDAC6-207ENST00000430858 LIMCH1Q9UPQ0 1083 aa11.14□□□□□ -0.63
HDAC6-207ENST00000430858 SLC4A7Q9Y6M7 1214 aa11.14□□□□□ -0.63
HDAC6-207ENST00000430858 IGKV6D-21A0A0A0MT36 114 aa11.13□□□□□ -0.63
HDAC6-207ENST00000430858 RRN3P2A6NIE6 340 aa11.13□□□□□ -0.63
HDAC6-207ENST00000430858 ZBBXA8MT70 800 aa11.13□□□□□ -0.63
HDAC6-207ENST00000430858 RSPH10B2B2RC85 870 aa11.13□□□□□ -0.63
HDAC6-207ENST00000430858 DDX39AO00148 427 aaKnown RBP11.13□□□□□ -0.63
HDAC6-207ENST00000430858 EDIL3O43854 480 aa11.13□□□□□ -0.63
HDAC6-207ENST00000430858 BAIAP3O94812 1187 aa11.13□□□□□ -0.63
HDAC6-207ENST00000430858 CCNE2O96020 404 aa11.13□□□□□ -0.63
HDAC6-207ENST00000430858 CXCL10P02778 98 aa11.13□□□□□ -0.63
HDAC6-207ENST00000430858 RSPH10BP0C881 870 aa11.13□□□□□ -0.63
HDAC6-207ENST00000430858 DNAJB2P25686 324 aa11.13□□□□□ -0.63
HDAC6-207ENST00000430858 KRT76Q01546 638 aa11.13□□□□□ -0.63
HDAC6-207ENST00000430858 GPNMBQ14956 572 aa11.13□□□□□ -0.63
HDAC6-207ENST00000430858 NONOQ15233 471 aaKnown RBP eCLIP11.13□□□□□ -0.63
HDAC6-207ENST00000430858 GRIK4Q16099 956 aa11.13□□□□□ -0.63
HDAC6-207ENST00000430858 ZNF746Q6NUN9 644 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms