RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 SCFD1Q8WVM8 642 aa14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 KCTD10Q9H3F6 313 aa14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 KCNMB3Q9NPA1 279 aa14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.68□□□□□ -0.06
SNRNP200-202ENST00000429650 GOLGA6BA6NDN3 693 aa14.67□□□□□ -0.06
SNRNP200-202ENST00000429650 PPEF1O14829 653 aaPredicted RBP14.67□□□□□ -0.06
SNRNP200-202ENST00000429650 SLURP2P0DP57 97 aa14.67□□□□□ -0.06
SNRNP200-202ENST00000429650 PAFAH1B1P43034 410 aa14.67□□□□□ -0.06
SNRNP200-202ENST00000429650 HERC4Q5GLZ8 1057 aaPredicted RBP14.67□□□□□ -0.06
SNRNP200-202ENST00000429650 FOXR1Q6PIV2 292 aa14.67□□□□□ -0.06
SNRNP200-202ENST00000429650 SND1Q7KZF4 910 aaKnown RBP eCLIP14.67□□□□□ -0.06
SNRNP200-202ENST00000429650 SP8Q8IXZ3 490 aa14.67□□□□□ -0.06
SNRNP200-202ENST00000429650 MXD3Q9BW11 206 aa14.67□□□□□ -0.06
SNRNP200-202ENST00000429650 KANSL2Q9H9L4 492 aa14.67□□□□□ -0.06
SNRNP200-202ENST00000429650 ATP6V0A2Q9Y487 856 aa14.67□□□□□ -0.06
SNRNP200-202ENST00000429650 KLRG2A4D1S0 409 aaPredicted RBP14.67□□□□□ -0.06
SNRNP200-202ENST00000429650 VGLL3A8MV65 326 aa14.67□□□□□ -0.06
SNRNP200-202ENST00000429650 SCNN1DP51172 638 aa14.67□□□□□ -0.06
SNRNP200-202ENST00000429650 APBA1Q02410 837 aa14.67□□□□□ -0.06
SNRNP200-202ENST00000429650 QRICH1Q2TAL8 776 aa14.67□□□□□ -0.06
SNRNP200-202ENST00000429650 CDC42EP5Q6NZY7 148 aa14.67□□□□□ -0.06
SNRNP200-202ENST00000429650 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.67□□□□□ -0.06
SNRNP200-202ENST00000429650 ZC3H3Q8IXZ2 948 aaKnown RBP14.67□□□□□ -0.06
SNRNP200-202ENST00000429650 EMILIN3Q9NT22 766 aa14.67□□□□□ -0.06
SNRNP200-202ENST00000429650 STIM2Q9P246 746 aa14.67□□□□□ -0.06
SNRNP200-202ENST00000429650 LCMT1Q9UIC8 334 aa14.67□□□□□ -0.06
SNRNP200-202ENST00000429650 TSKSQ9UJT2 592 aa14.67□□□□□ -0.06
SNRNP200-202ENST00000429650 FRMD3A2A2Y4 597 aa14.66□□□□□ -0.06
SNRNP200-202ENST00000429650 HLA-DOAP06340 250 aa14.66□□□□□ -0.06
SNRNP200-202ENST00000429650 NAP1L1P55209 391 aaKnown RBP14.66□□□□□ -0.06
SNRNP200-202ENST00000429650 SRLQ86TD4 932 aa14.66□□□□□ -0.06
SNRNP200-202ENST00000429650 ANO3Q9BYT9 981 aa14.66□□□□□ -0.06
SNRNP200-202ENST00000429650 RBM12Q9NTZ6 932 aaKnown RBP14.66□□□□□ -0.06
SNRNP200-202ENST00000429650 CYP3A7-CYP3A51PA0A087WV96 503 aa14.66□□□□□ -0.06
SNRNP200-202ENST00000429650 SLC26A4O43511 780 aa14.66□□□□□ -0.06
SNRNP200-202ENST00000429650 MED24O75448 989 aa14.66□□□□□ -0.06
SNRNP200-202ENST00000429650 CYP3A7P24462 503 aa14.66□□□□□ -0.06
SNRNP200-202ENST00000429650 STAT3P40763 770 aa14.66□□□□□ -0.06
SNRNP200-202ENST00000429650 USP11P51784 963 aa14.66□□□□□ -0.06
SNRNP200-202ENST00000429650 GLT8D2Q9H1C3 349 aa14.66□□□□□ -0.06
SNRNP200-202ENST00000429650 POLRMTO00411 1230 aaKnown RBP14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 EPHB4P54760 987 aa14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 SLC12A3P55017 1021 aa14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 NAB2Q15742 525 aa14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 SLC18A3Q16572 532 aa14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 ARSHQ5FYA8 562 aa14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 GPATCH11Q8N954 259 aa14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 TBC1D5Q92609 795 aa14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 MS4A14Q96JA4 679 aa14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 MBOAT7Q96N66 472 aa14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 LUC7LQ9NQ29 371 aaKnown RBP14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 FEZ2Q9UHY8 353 aaPredicted RBP14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 PCDHA1Q9Y5I3 950 aa14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 MYO1CO00159 1063 aa14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 PALMO75781 387 aa14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 TNFRSF8P28908 595 aa14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 NFIAQ12857 509 aa14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 ADAM9Q13443 819 aa14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 RAPGEF1Q13905 1077 aa14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 EDRF1Q3B7T1 1238 aa14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 CFAP221Q4G0U5 840 aa14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 APOBEC3HQ6NTF7 200 aaKnown RBP14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 C8orf74Q6P047 294 aa14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 PPP4R3CPQ6ZMV5 832 aa14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 GANQ9H2C0 597 aa14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 DNAJC18Q9H819 358 aa14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 AIPL1Q9NZN9 384 aa14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 RNF14Q9UBS8 474 aa14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 RRP15Q9Y3B9 282 aaKnown RBP14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 PITPNM2Q9BZ72 1349 aa14.65□□□□□ -0.06
SNRNP200-202ENST00000429650 POTEFA5A3E0 1075 aa14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 POTEIP0CG38 1075 aa14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 KLRC1P26715 233 aa14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 EMBQ6PCB8 327 aa14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 POTEGQ6S5H5 508 aa14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 POTEEQ6S8J3 1075 aa14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 FAM76AQ8TAV0 307 aa14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 CCDC17Q96LX7 622 aa14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 ZC3H12CQ9C0D7 883 aaKnown RBP14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 TSPYL1Q9H0U9 437 aa14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 DHX36Q9H2U1 1008 aaKnown RBP14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 A0A087X0T9 212 aa14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 GOLGA6CA6NDK9 693 aa14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 MYCNP04198 464 aaPredicted RBP14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 KRT18P05783 430 aaKnown RBP14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 FAM228BP0C875 321 aa14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 GOLGA6DP0CG33 693 aa14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 ARID5AQ03989 594 aa14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 SPIRE1Q08AE8 756 aa14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 KCNH2Q12809 1159 aa14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 CDC37Q16543 378 aaPredicted RBP14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 GLE1Q53GS7 698 aaKnown RBP14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 HHIPL2Q6UWX4 724 aa14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 ZFPM1Q8IX07 1006 aa14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 SLFN12Q8IYM2 578 aa14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 FAM133AQ8N9E0 248 aa14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 EHD4Q9H223 541 aa14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 ZHX3Q9H4I2 956 aa14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 GOLGA6AQ9NYA3 693 aa14.64□□□□□ -0.07
SNRNP200-202ENST00000429650 PCDHGC5Q9Y5F6 944 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms