RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 HTATIP2Q9BUP3 242 aa16.89■□□□□ 0.29
GARNL3-204ENST00000429629 SMARCAD1Q9H4L7 1026 aa16.89■□□□□ 0.29
GARNL3-204ENST00000429629 STARD7Q9NQZ5 370 aa16.89■□□□□ 0.29
GARNL3-204ENST00000429629 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.89■□□□□ 0.29
GARNL3-204ENST00000429629 PCDHA12Q9UN75 941 aa16.89■□□□□ 0.29
GARNL3-204ENST00000429629 MORC2Q9Y6X9 1032 aaPredicted RBP16.89■□□□□ 0.29
GARNL3-204ENST00000429629 A0A0U1RQG5 324 aaPredicted RBP16.88■□□□□ 0.29
GARNL3-204ENST00000429629 WDR64B1ANS9 1081 aa16.88■□□□□ 0.29
GARNL3-204ENST00000429629 ARVCFO00192 962 aa16.88■□□□□ 0.29
GARNL3-204ENST00000429629 CCNE2O96020 404 aa16.88■□□□□ 0.29
GARNL3-204ENST00000429629 MYCNP04198 464 aaPredicted RBP16.88■□□□□ 0.29
GARNL3-204ENST00000429629 MYL3P08590 195 aa16.88■□□□□ 0.29
GARNL3-204ENST00000429629 TCF7P36402 384 aaPredicted RBP16.88■□□□□ 0.29
GARNL3-204ENST00000429629 PRPHP41219 470 aa16.88■□□□□ 0.29
GARNL3-204ENST00000429629 RESTQ13127 1097 aa16.88■□□□□ 0.29
GARNL3-204ENST00000429629 CALCRLQ16602 461 aa16.88■□□□□ 0.29
GARNL3-204ENST00000429629 MIS18BP1Q6P0N0 1132 aa16.88■□□□□ 0.29
GARNL3-204ENST00000429629 ANKRD33Q7Z3H0 272 aa16.88■□□□□ 0.29
GARNL3-204ENST00000429629 KAT2BQ92831 832 aa16.88■□□□□ 0.29
GARNL3-204ENST00000429629 EMSYQ7Z589 1322 aa16.88■□□□□ 0.29
GARNL3-204ENST00000429629 H3BRB1 525 aa16.87■□□□□ 0.29
GARNL3-204ENST00000429629 WNT7AO00755 349 aa16.87■□□□□ 0.29
GARNL3-204ENST00000429629 MARCH6O60337 910 aa16.87■□□□□ 0.29
GARNL3-204ENST00000429629 LGALS2P05162 132 aa16.87■□□□□ 0.29
GARNL3-204ENST00000429629 PSAPP07602 524 aa16.87■□□□□ 0.29
GARNL3-204ENST00000429629 SUPT20HL2P0C7V6 817 aa16.87■□□□□ 0.29
GARNL3-204ENST00000429629 ZSCAN22P10073 491 aaPredicted RBP16.87■□□□□ 0.29
GARNL3-204ENST00000429629 MCM7P33993 719 aa16.87■□□□□ 0.29
GARNL3-204ENST00000429629 ITGA7Q13683 1181 aa16.87■□□□□ 0.29
GARNL3-204ENST00000429629 ZNF174Q15697 407 aa16.87■□□□□ 0.29
GARNL3-204ENST00000429629 ARL6IP4Q66PJ3 421 aaKnown RBP16.87■□□□□ 0.29
GARNL3-204ENST00000429629 ATL3Q6DD88 541 aa16.87■□□□□ 0.29
GARNL3-204ENST00000429629 POTEDQ86YR6 584 aa16.87■□□□□ 0.29
GARNL3-204ENST00000429629 TUT1Q9H6E5 874 aaKnown RBP16.87■□□□□ 0.29
GARNL3-204ENST00000429629 AZI2Q9H6S1 392 aa16.87■□□□□ 0.29
GARNL3-204ENST00000429629 DISC1Q9NRI5 854 aa16.87■□□□□ 0.29
GARNL3-204ENST00000429629 ERAP1Q9NZ08 941 aa16.87■□□□□ 0.29
GARNL3-204ENST00000429629 PKD2L1Q9P0L9 805 aa16.87■□□□□ 0.29
GARNL3-204ENST00000429629 VAV3Q9UKW4 847 aa16.87■□□□□ 0.29
GARNL3-204ENST00000429629 ZNF215Q9UL58 517 aaPredicted RBP16.87■□□□□ 0.29
GARNL3-204ENST00000429629 CEP131Q9UPN4 1083 aa16.87■□□□□ 0.29
GARNL3-204ENST00000429629 MCM3APO60318 1980 aa16.87■□□□□ 0.29
GARNL3-204ENST00000429629 MROH7Q68CQ1 1323 aa16.87■□□□□ 0.29
GARNL3-204ENST00000429629 BRD1O95696 1058 aa16.86■□□□□ 0.29
GARNL3-204ENST00000429629 OR52Z1P0C646 297 aa16.86■□□□□ 0.29
GARNL3-204ENST00000429629 ATP2B1P20020 1258 aa16.86■□□□□ 0.29
GARNL3-204ENST00000429629 STAT5BP51692 787 aa16.86■□□□□ 0.29
GARNL3-204ENST00000429629 PDIA5Q14554 519 aa16.86■□□□□ 0.29
GARNL3-204ENST00000429629 FAM160B1Q5W0V3 765 aa16.86■□□□□ 0.29
GARNL3-204ENST00000429629 FERMT2Q96AC1 680 aa16.86■□□□□ 0.29
GARNL3-204ENST00000429629 VTI1AQ96AJ9 217 aa16.86■□□□□ 0.29
GARNL3-204ENST00000429629 PCDHB6Q9Y5E3 794 aa16.86■□□□□ 0.29
GARNL3-204ENST00000429629 MAFBQ9Y5Q3 323 aaPredicted RBP16.86■□□□□ 0.29
GARNL3-204ENST00000429629 STK24Q9Y6E0 443 aa16.86■□□□□ 0.29
GARNL3-204ENST00000429629 GRIN2DO15399 1336 aa16.86■□□□□ 0.29
GARNL3-204ENST00000429629 DKC1O60832 514 aaKnown RBP eCLIP16.85■□□□□ 0.298e-6■□□□□ 10.8
GARNL3-204ENST00000429629 DDIT3P35638 169 aa16.85■□□□□ 0.29
GARNL3-204ENST00000429629 PSEN2P49810 448 aa16.85■□□□□ 0.29
GARNL3-204ENST00000429629 FXR2P51116 673 aaKnown RBP eCLIP16.85■□□□□ 0.29
GARNL3-204ENST00000429629 ATP2C1P98194 919 aaPredicted RBP16.85■□□□□ 0.29
GARNL3-204ENST00000429629 SPIRE1Q08AE8 756 aa16.85■□□□□ 0.29
GARNL3-204ENST00000429629 PTGDRQ13258 359 aa16.85■□□□□ 0.29
GARNL3-204ENST00000429629 MFSD10Q14728 455 aa16.85■□□□□ 0.29
GARNL3-204ENST00000429629 EPHA7Q15375 998 aa16.85■□□□□ 0.29
GARNL3-204ENST00000429629 NBPF20Q3BBV1 942 aa16.85■□□□□ 0.29
GARNL3-204ENST00000429629 FERMT3Q86UX7 667 aa16.85■□□□□ 0.29
GARNL3-204ENST00000429629 PCYT2Q99447 389 aa16.85■□□□□ 0.29
GARNL3-204ENST00000429629 TMEM60Q9H2L4 133 aa16.85■□□□□ 0.29
GARNL3-204ENST00000429629 UNC45AQ9H3U1 944 aa16.85■□□□□ 0.29
GARNL3-204ENST00000429629 TTC12Q9H892 705 aaPredicted RBP16.85■□□□□ 0.29
GARNL3-204ENST00000429629 KIAA1217Q5T5P2 1943 aa16.84■□□□□ 0.29
GARNL3-204ENST00000429629 HOXC8P31273 242 aa16.84■□□□□ 0.29
GARNL3-204ENST00000429629 TXKP42681 527 aa16.84■□□□□ 0.29
GARNL3-204ENST00000429629 NUCB2P80303 420 aa16.84■□□□□ 0.29
GARNL3-204ENST00000429629 KIAA0753Q2KHM9 967 aa16.84■□□□□ 0.29
GARNL3-204ENST00000429629 MIER3Q7Z3K6 550 aa16.84■□□□□ 0.29
GARNL3-204ENST00000429629 SPRYD3Q8NCJ5 442 aa16.84■□□□□ 0.29
GARNL3-204ENST00000429629 GLG1Q92896 1179 aa16.84■□□□□ 0.29
GARNL3-204ENST00000429629 DAXXQ9UER7 740 aaPredicted RBP16.84■□□□□ 0.29
GARNL3-204ENST00000429629 TELO2Q9Y4R8 837 aa16.84■□□□□ 0.29
GARNL3-204ENST00000429629 DDX39AO00148 427 aaKnown RBP16.83■□□□□ 0.28
GARNL3-204ENST00000429629 SORBS3O60504 671 aa16.83■□□□□ 0.28
GARNL3-204ENST00000429629 F13A1P00488 732 aa16.83■□□□□ 0.28
GARNL3-204ENST00000429629 P4HBP07237 508 aaKnown RBP16.83■□□□□ 0.28
GARNL3-204ENST00000429629 GNAT1P11488 350 aa16.83■□□□□ 0.28
GARNL3-204ENST00000429629 MUTP22033 750 aa16.83■□□□□ 0.28
GARNL3-204ENST00000429629 SP4Q02446 784 aa16.83■□□□□ 0.28
GARNL3-204ENST00000429629 LRRC26Q2I0M4 334 aa16.83■□□□□ 0.28
GARNL3-204ENST00000429629 SWSAP1Q6NVH7 229 aa16.83■□□□□ 0.28
GARNL3-204ENST00000429629 NEK9Q8TD19 979 aa16.83■□□□□ 0.28
GARNL3-204ENST00000429629 ZNF396Q96N95 335 aaPredicted RBP16.83■□□□□ 0.28
GARNL3-204ENST00000429629 HSD17B14Q9BPX1 270 aa16.83■□□□□ 0.28
GARNL3-204ENST00000429629 RAB34Q9BZG1 259 aa16.83■□□□□ 0.28
GARNL3-204ENST00000429629 ZNF302Q9NR11 478 aa16.83■□□□□ 0.28
GARNL3-204ENST00000429629 SAMM50Q9Y512 469 aa16.83■□□□□ 0.28
GARNL3-204ENST00000429629 ATP6V1DQ9Y5K8 247 aa16.83■□□□□ 0.28
GARNL3-204ENST00000429629 NRCAMQ92823 1304 aa16.82■□□□□ 0.28
GARNL3-204ENST00000429629 RRN3P2A6NIE6 340 aa16.82■□□□□ 0.28
GARNL3-204ENST00000429629 DCDC2CA8MYV0 355 aa16.82■□□□□ 0.28
GARNL3-204ENST00000429629 TMEM266Q2M3C6 531 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms