RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 GRIN2DO15399 1336 aa25.22■■□□□ 1.63
PTPN18-205ENST00000428843 A0A0U1RQG5 324 aaPredicted RBP25.22■■□□□ 1.63
PTPN18-205ENST00000428843 MARCH6O60337 910 aa25.22■■□□□ 1.63
PTPN18-205ENST00000428843 ATG7O95352 703 aa25.22■■□□□ 1.63
PTPN18-205ENST00000428843 ORC2Q13416 577 aaPredicted RBP25.22■■□□□ 1.63
PTPN18-205ENST00000428843 CALCRLQ16602 461 aa25.22■■□□□ 1.63
PTPN18-205ENST00000428843 RILPL1Q5EBL4 403 aa25.22■■□□□ 1.63
PTPN18-205ENST00000428843 HTATIP2Q9BUP3 242 aa25.22■■□□□ 1.63
PTPN18-205ENST00000428843 TMEM60Q9H2L4 133 aa25.22■■□□□ 1.63
PTPN18-205ENST00000428843 UNC45AQ9H3U1 944 aa25.22■■□□□ 1.63
PTPN18-205ENST00000428843 PCDHB6Q9Y5E3 794 aa25.22■■□□□ 1.63
PTPN18-205ENST00000428843 BAG4O95429 457 aaKnown RBP25.21■■□□□ 1.63
PTPN18-205ENST00000428843 F2P00734 622 aa25.21■■□□□ 1.63
PTPN18-205ENST00000428843 ITGA7Q13683 1181 aa25.21■■□□□ 1.63
PTPN18-205ENST00000428843 SNX17Q15036 470 aa25.21■■□□□ 1.63
PTPN18-205ENST00000428843 TRIM50Q86XT4 487 aa25.21■■□□□ 1.63
PTPN18-205ENST00000428843 SLFN12Q8IYM2 578 aa25.21■■□□□ 1.63
PTPN18-205ENST00000428843 MKI67P46013 3256 aaKnown RBP25.21■■□□□ 1.63
PTPN18-205ENST00000428843 PSEN2P49810 448 aa25.2■■□□□ 1.62
PTPN18-205ENST00000428843 CHMP4BP1P59074 171 aa25.2■■□□□ 1.62
PTPN18-205ENST00000428843 MFSD10Q14728 455 aa25.2■■□□□ 1.62
PTPN18-205ENST00000428843 NBPF20Q3BBV1 942 aa25.2■■□□□ 1.62
PTPN18-205ENST00000428843 C1orf53Q5VUE5 145 aa25.2■■□□□ 1.62
PTPN18-205ENST00000428843 ABHD15Q6UXT9 468 aa25.2■■□□□ 1.62
PTPN18-205ENST00000428843 PPP1R13LQ8WUF5 828 aa25.2■■□□□ 1.62
PTPN18-205ENST00000428843 MTMR9Q96QG7 549 aa25.2■■□□□ 1.62
PTPN18-205ENST00000428843 PCYT2Q99447 389 aa25.2■■□□□ 1.62
PTPN18-205ENST00000428843 KATNAL1Q9BW62 490 aa25.2■■□□□ 1.62
PTPN18-205ENST00000428843 WDR81Q562E7 1941 aa25.2■■□□□ 1.62
PTPN18-205ENST00000428843 H3BRB1 525 aa25.19■■□□□ 1.62
PTPN18-205ENST00000428843 ARVCFO00192 962 aa25.19■■□□□ 1.62
PTPN18-205ENST00000428843 HAS3O00219 553 aa25.19■■□□□ 1.62
PTPN18-205ENST00000428843 CHMP2AO43633 222 aa25.19■■□□□ 1.62
PTPN18-205ENST00000428843 LGR5O75473 907 aa25.19■■□□□ 1.62
PTPN18-205ENST00000428843 SUPT20HL2P0C7V6 817 aa25.19■■□□□ 1.62
PTPN18-205ENST00000428843 PDIA4P13667 645 aaKnown RBP25.19■■□□□ 1.62
PTPN18-205ENST00000428843 RTP1P59025 263 aa25.19■■□□□ 1.62
PTPN18-205ENST00000428843 TRIM60Q495X7 471 aa25.19■■□□□ 1.62
PTPN18-205ENST00000428843 MIS18BP1Q6P0N0 1132 aa25.19■■□□□ 1.62
PTPN18-205ENST00000428843 B3GNT9Q6UX72 402 aa25.19■■□□□ 1.62
PTPN18-205ENST00000428843 SMAP1Q8IYB5 467 aaPredicted RBP25.19■■□□□ 1.62
PTPN18-205ENST00000428843 SLC43A3Q8NBI5 491 aa25.19■■□□□ 1.62
PTPN18-205ENST00000428843 TUT1Q9H6E5 874 aaKnown RBP25.19■■□□□ 1.62
PTPN18-205ENST00000428843 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.19■■□□□ 1.62
PTPN18-205ENST00000428843 VAV3Q9UKW4 847 aa25.19■■□□□ 1.62
PTPN18-205ENST00000428843 EMSYQ7Z589 1322 aa25.18■■□□□ 1.62
PTPN18-205ENST00000428843 IGKV6D-21A0A0A0MT36 114 aa25.18■■□□□ 1.62
PTPN18-205ENST00000428843 WDR64B1ANS9 1081 aa25.18■■□□□ 1.62
PTPN18-205ENST00000428843 CDK7P50613 346 aa25.18■■□□□ 1.62
PTPN18-205ENST00000428843 KIAA0753Q2KHM9 967 aa25.18■■□□□ 1.62
PTPN18-205ENST00000428843 C4orf32Q8N8J7 132 aa25.18■■□□□ 1.62
PTPN18-205ENST00000428843 ZNF215Q9UL58 517 aaPredicted RBP25.18■■□□□ 1.62
PTPN18-205ENST00000428843 ATP11BQ9Y2G3 1177 aa25.18■■□□□ 1.62
PTPN18-205ENST00000428843 SAMM50Q9Y512 469 aa25.18■■□□□ 1.62
PTPN18-205ENST00000428843 PCDHA10Q9Y5I2 948 aa25.18■■□□□ 1.62
PTPN18-205ENST00000428843 ANP32AP39687 249 aaKnown RBP25.17■■□□□ 1.62
PTPN18-205ENST00000428843 TXKP42681 527 aa25.17■■□□□ 1.62
PTPN18-205ENST00000428843 JAK3P52333 1124 aa25.17■■□□□ 1.62
PTPN18-205ENST00000428843 PPP2R5CQ13362 524 aa25.17■■□□□ 1.62
PTPN18-205ENST00000428843 PKP1Q13835 747 aa25.17■■□□□ 1.62
PTPN18-205ENST00000428843 FOXD4L5Q5VV16 416 aaPredicted RBP25.17■■□□□ 1.62
PTPN18-205ENST00000428843 MIER3Q7Z3K6 550 aa25.17■■□□□ 1.62
PTPN18-205ENST00000428843 FOXD4L4Q8WXT5 416 aaPredicted RBP25.17■■□□□ 1.62
PTPN18-205ENST00000428843 GLG1Q92896 1179 aa25.17■■□□□ 1.62
PTPN18-205ENST00000428843 SMARCAD1Q9H4L7 1026 aa25.17■■□□□ 1.62
PTPN18-205ENST00000428843 ZSCAN16Q9H4T2 348 aaPredicted RBP25.17■■□□□ 1.62
PTPN18-205ENST00000428843 AZI2Q9H6S1 392 aa25.17■■□□□ 1.62
PTPN18-205ENST00000428843 DISC1Q9NRI5 854 aa25.17■■□□□ 1.62
PTPN18-205ENST00000428843 BACH1O14867 736 aa25.16■■□□□ 1.62
PTPN18-205ENST00000428843 PSAPP07602 524 aa25.16■■□□□ 1.62
PTPN18-205ENST00000428843 OR52Z1P0C646 297 aa25.16■■□□□ 1.62
PTPN18-205ENST00000428843 ZSCAN22P10073 491 aaPredicted RBP25.16■■□□□ 1.62
PTPN18-205ENST00000428843 SFNP31947 248 aa25.16■■□□□ 1.62
PTPN18-205ENST00000428843 PTGDRQ13258 359 aa25.16■■□□□ 1.62
PTPN18-205ENST00000428843 SWSAP1Q6NVH7 229 aa25.16■■□□□ 1.62
PTPN18-205ENST00000428843 FAM173BQ6P4H8 233 aa25.16■■□□□ 1.62
PTPN18-205ENST00000428843 NFRKBQ6P4R8 1299 aa25.16■■□□□ 1.62
PTPN18-205ENST00000428843 CCDC60Q8IWA6 550 aaPredicted RBP25.16■■□□□ 1.62
PTPN18-205ENST00000428843 RDM1Q8NG50 284 aa25.16■■□□□ 1.62
PTPN18-205ENST00000428843 DPF3Q92784 378 aa25.16■■□□□ 1.62
PTPN18-205ENST00000428843 SEZ6LQ9BYH1 1024 aa25.16■■□□□ 1.62
PTPN18-205ENST00000428843 TTC12Q9H892 705 aaPredicted RBP25.16■■□□□ 1.62
PTPN18-205ENST00000428843 PCDHA12Q9UN75 941 aa25.16■■□□□ 1.62
PTPN18-205ENST00000428843 MYH9P35579 1960 aaKnown RBP25.16■■□□□ 1.62
PTPN18-205ENST00000428843 MYH15Q9Y2K3 1946 aa25.16■■□□□ 1.62
PTPN18-205ENST00000428843 EML1O00423 815 aa25.15■■□□□ 1.62
PTPN18-205ENST00000428843 MARK3P27448 753 aa25.15■■□□□ 1.62
PTPN18-205ENST00000428843 STAT5BP51692 787 aa25.15■■□□□ 1.62
PTPN18-205ENST00000428843 SPIRE1Q08AE8 756 aa25.15■■□□□ 1.62
PTPN18-205ENST00000428843 FAM47CQ5HY64 1035 aa25.15■■□□□ 1.62
PTPN18-205ENST00000428843 FAM160B1Q5W0V3 765 aa25.15■■□□□ 1.62
PTPN18-205ENST00000428843 PLPPR4Q7Z2D5 763 aa25.15■■□□□ 1.62
PTPN18-205ENST00000428843 ZNF302Q9NR11 478 aa25.15■■□□□ 1.62
PTPN18-205ENST00000428843 ERAP1Q9NZ08 941 aa25.15■■□□□ 1.62
PTPN18-205ENST00000428843 MROH7Q68CQ1 1323 aa25.14■■□□□ 1.62
PTPN18-205ENST00000428843 PQBP1O60828 265 aaKnown RBP25.14■■□□□ 1.62
PTPN18-205ENST00000428843 MLLT1Q03111 559 aaPredicted RBP25.14■■□□□ 1.62
PTPN18-205ENST00000428843 TLE2Q04725 743 aa25.14■■□□□ 1.62
PTPN18-205ENST00000428843 NCAPH2Q6IBW4 605 aa25.14■■□□□ 1.62
PTPN18-205ENST00000428843 ANKRD33Q7Z3H0 272 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms