RNA–Protein interactions for RNA: ENST00000428767.1

ALMS1P1-201, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

BASIC

Gene ALMS1P1, Length 921 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-201ENST00000428767 TUT1Q9H6E5 874 aaKnown RBP13.56□□□□□ -0.24
ALMS1P1-201ENST00000428767 SETD4Q9NVD3 440 aa13.56□□□□□ -0.24
ALMS1P1-201ENST00000428767 ANAPC4Q9UJX5 808 aa13.56□□□□□ -0.24
ALMS1P1-201ENST00000428767 DDX19BQ9UMR2 479 aa13.56□□□□□ -0.24
ALMS1P1-201ENST00000428767 FRYLO94915 3013 aa13.56□□□□□ -0.24
ALMS1P1-201ENST00000428767 ZNF292O60281 2723 aa13.55□□□□□ -0.24
ALMS1P1-201ENST00000428767 SNHG28P0DPA3 235 aa13.55□□□□□ -0.24
ALMS1P1-201ENST00000428767 SP2Q02086 613 aa13.55□□□□□ -0.24
ALMS1P1-201ENST00000428767 ADSSL1Q8N142 457 aa13.55□□□□□ -0.24
ALMS1P1-201ENST00000428767 TMEM105Q8N8V8 129 aa13.55□□□□□ -0.24
ALMS1P1-201ENST00000428767 KLHL23Q8NBE8 558 aa13.55□□□□□ -0.24
ALMS1P1-201ENST00000428767 SPPL3Q8TCT6 385 aa13.55□□□□□ -0.24
ALMS1P1-201ENST00000428767 POF1BQ8WVV4 589 aa13.55□□□□□ -0.24
ALMS1P1-201ENST00000428767 P2RX5Q93086 422 aa13.55□□□□□ -0.24
ALMS1P1-201ENST00000428767 NKD2Q969F2 451 aaPredicted RBP13.55□□□□□ -0.24
ALMS1P1-201ENST00000428767 ZNF689Q96CS4 500 aaPredicted RBP13.55□□□□□ -0.24
ALMS1P1-201ENST00000428767 RIPOR3Q96MK2 946 aa13.55□□□□□ -0.24
ALMS1P1-201ENST00000428767 BCAS3Q9H6U6 928 aa13.55□□□□□ -0.24
ALMS1P1-201ENST00000428767 FNDC1Q4ZHG4 1894 aaPredicted RBP13.55□□□□□ -0.24
ALMS1P1-201ENST00000428767 PER2O15055 1255 aa13.54□□□□□ -0.24
ALMS1P1-201ENST00000428767 DHX16O60231 1041 aaKnown RBP13.54□□□□□ -0.24
ALMS1P1-201ENST00000428767 PPFIA3O75145 1194 aa13.54□□□□□ -0.24
ALMS1P1-201ENST00000428767 IBSPP21815 317 aaPredicted RBP13.54□□□□□ -0.24
ALMS1P1-201ENST00000428767 ARHGAP4P98171 946 aa13.54□□□□□ -0.24
ALMS1P1-201ENST00000428767 QRICH1Q2TAL8 776 aa13.54□□□□□ -0.24
ALMS1P1-201ENST00000428767 GPATCH4Q5T3I0 446 aaKnown RBP13.54□□□□□ -0.24
ALMS1P1-201ENST00000428767 TRIM50Q86XT4 487 aa13.54□□□□□ -0.24
ALMS1P1-201ENST00000428767 VN1R2Q8NFZ6 395 aa13.54□□□□□ -0.24
ALMS1P1-201ENST00000428767 IL31RAQ8NI17 732 aa13.54□□□□□ -0.24
ALMS1P1-201ENST00000428767 APOL5Q9BWW9 433 aa13.54□□□□□ -0.24
ALMS1P1-201ENST00000428767 TLE6Q9H808 572 aa13.54□□□□□ -0.24
ALMS1P1-201ENST00000428767 MLXIPQ9HAP2 919 aa13.54□□□□□ -0.24
ALMS1P1-201ENST00000428767 MRPL11Q9Y3B7 192 aaKnown RBP13.54□□□□□ -0.24
ALMS1P1-201ENST00000428767 MED19A0JLT2 244 aaPredicted RBP13.53□□□□□ -0.24
ALMS1P1-201ENST00000428767 ENPP3O14638 875 aa13.53□□□□□ -0.24
ALMS1P1-201ENST00000428767 DGKIO75912 1065 aa13.53□□□□□ -0.24
ALMS1P1-201ENST00000428767 CHRNA1P02708 482 aa13.53□□□□□ -0.24
ALMS1P1-201ENST00000428767 HSPD1P10809 573 aaKnown RBP13.53□□□□□ -0.24
ALMS1P1-201ENST00000428767 GATMP50440 423 aa13.53□□□□□ -0.24
ALMS1P1-201ENST00000428767 HAND2P61296 217 aa13.53□□□□□ -0.24
ALMS1P1-201ENST00000428767 LPIN1Q14693 890 aa13.53□□□□□ -0.24
ALMS1P1-201ENST00000428767 FAM26DQ5JW98 314 aa13.53□□□□□ -0.24
ALMS1P1-201ENST00000428767 ADGRF4Q8IZF3 695 aa13.53□□□□□ -0.24
ALMS1P1-201ENST00000428767 KREMEN2Q8NCW0 462 aa13.53□□□□□ -0.24
ALMS1P1-201ENST00000428767 LMBR1Q8WVP7 490 aa13.53□□□□□ -0.24
ALMS1P1-201ENST00000428767 SUSD6Q92537 303 aa13.53□□□□□ -0.24
ALMS1P1-201ENST00000428767 PDCD2LQ9BRP1 358 aa13.53□□□□□ -0.24
ALMS1P1-201ENST00000428767 ZKSCAN3Q9BRR0 538 aa13.53□□□□□ -0.24
ALMS1P1-201ENST00000428767 TSHZ2Q9NRE2 1034 aa13.53□□□□□ -0.24
ALMS1P1-201ENST00000428767 TCP11L1Q9NUJ3 509 aa13.53□□□□□ -0.24
ALMS1P1-201ENST00000428767 EP300Q09472 2414 aaPredicted RBP13.52□□□□□ -0.24
ALMS1P1-201ENST00000428767 NOP56O00567 594 aaKnown RBP13.52□□□□□ -0.25
ALMS1P1-201ENST00000428767 FGRP09769 529 aa13.52□□□□□ -0.25
ALMS1P1-201ENST00000428767 GNAT1P11488 350 aa13.52□□□□□ -0.25
ALMS1P1-201ENST00000428767 MS4A1P11836 297 aa13.52□□□□□ -0.25
ALMS1P1-201ENST00000428767 ATF7P17544 494 aaPredicted RBP13.52□□□□□ -0.25
ALMS1P1-201ENST00000428767 NUBP1P53384 320 aa13.52□□□□□ -0.25
ALMS1P1-201ENST00000428767 UTP14CQ5TAP6 766 aaKnown RBP13.52□□□□□ -0.25
ALMS1P1-201ENST00000428767 RUFY4Q6ZNE9 571 aa13.52□□□□□ -0.25
ALMS1P1-201ENST00000428767 MICAL1Q8TDZ2 1067 aa13.52□□□□□ -0.25
ALMS1P1-201ENST00000428767 LINC01599Q8WXQ3 324 aa13.52□□□□□ -0.25
ALMS1P1-201ENST00000428767 SMOC2Q9H3U7 446 aa13.52□□□□□ -0.25
ALMS1P1-201ENST00000428767 VAT1LQ9HCJ6 419 aa13.52□□□□□ -0.25
ALMS1P1-201ENST00000428767 RCAN3Q9UKA8 241 aa13.52□□□□□ -0.25
ALMS1P1-201ENST00000428767 BAZ2BQ9UIF8 2168 aaKnown RBP13.51□□□□□ -0.25
ALMS1P1-201ENST00000428767 OPLAHO14841 1288 aa13.51□□□□□ -0.25
ALMS1P1-201ENST00000428767 KRT37O76014 449 aa13.51□□□□□ -0.25
ALMS1P1-201ENST00000428767 HOXA13P31271 388 aaPredicted RBP13.51□□□□□ -0.25
ALMS1P1-201ENST00000428767 PGM5Q15124 567 aa13.51□□□□□ -0.25
ALMS1P1-201ENST00000428767 NAALADL2Q58DX5 795 aa13.51□□□□□ -0.25
ALMS1P1-201ENST00000428767 KCNV1Q6PIU1 500 aa13.51□□□□□ -0.25
ALMS1P1-201ENST00000428767 CMTR2Q8IYT2 770 aaKnown RBP13.51□□□□□ -0.25
ALMS1P1-201ENST00000428767 MAF1Q9H063 256 aa13.51□□□□□ -0.25
ALMS1P1-201ENST00000428767 EHMT1Q9H9B1 1298 aa13.51□□□□□ -0.25
ALMS1P1-201ENST00000428767 CDH22Q9UJ99 828 aa13.51□□□□□ -0.25
ALMS1P1-201ENST00000428767 TELO2Q9Y4R8 837 aa13.51□□□□□ -0.25
ALMS1P1-201ENST00000428767 NCOR2Q9Y618 2525 aa13.51□□□□□ -0.25
ALMS1P1-201ENST00000428767 LAMA4Q16363 1823 aa13.5□□□□□ -0.25
ALMS1P1-201ENST00000428767 EPG5Q9HCE0 2579 aa13.5□□□□□ -0.25
ALMS1P1-201ENST00000428767 BRD1O95696 1058 aa13.5□□□□□ -0.25
ALMS1P1-201ENST00000428767 CCND2P30279 289 aa13.5□□□□□ -0.25
ALMS1P1-201ENST00000428767 HSD17B4P51659 736 aa13.5□□□□□ -0.25
ALMS1P1-201ENST00000428767 SP4Q02446 784 aa13.5□□□□□ -0.25
ALMS1P1-201ENST00000428767 MGAT3Q09327 533 aa13.5□□□□□ -0.25
ALMS1P1-201ENST00000428767 FBXO47Q5MNV8 452 aa13.5□□□□□ -0.25
ALMS1P1-201ENST00000428767 LLGL2Q6P1M3 1020 aa13.5□□□□□ -0.25
ALMS1P1-201ENST00000428767 PI4K2BQ8TCG2 481 aa13.5□□□□□ -0.25
ALMS1P1-201ENST00000428767 OTUD7AQ8TE49 926 aaPredicted RBP13.5□□□□□ -0.25
ALMS1P1-201ENST00000428767 NEK1Q96PY6 1258 aa13.5□□□□□ -0.25
ALMS1P1-201ENST00000428767 TPRP12270 2363 aaKnown RBP13.49□□□□□ -0.25
ALMS1P1-201ENST00000428767 FGAP02671 866 aa13.49□□□□□ -0.25
ALMS1P1-201ENST00000428767 CD52P31358 61 aa13.49□□□□□ -0.25
ALMS1P1-201ENST00000428767 TECP42680 631 aa13.49□□□□□ -0.25
ALMS1P1-201ENST00000428767 ADAM17P78536 824 aa13.49□□□□□ -0.25
ALMS1P1-201ENST00000428767 MTMR3Q13615 1198 aa13.49□□□□□ -0.25
ALMS1P1-201ENST00000428767 ALX1Q15699 326 aa13.49□□□□□ -0.25
ALMS1P1-201ENST00000428767 DUSP6Q16828 381 aa13.49□□□□□ -0.25
ALMS1P1-201ENST00000428767 SPOUT1Q5T280 376 aaKnown RBP13.49□□□□□ -0.25
ALMS1P1-201ENST00000428767 MCTP2Q6DN12 878 aa13.49□□□□□ -0.25
ALMS1P1-201ENST00000428767 CYFIP1Q7L576 1253 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms