RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 DHX38Q92620 1227 aaKnown RBP9.67□□□□□ -0.86
CTNND1-208ENST00000428599 GJA10Q969M2 543 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 TMEM206Q9H813 350 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 DONSONQ9NYP3 566 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 BAIAP2L1Q9UHR4 511 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 FAM95CA0A1B0GW59 222 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 LAD1O00515 517 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 KCNQ2O43526 872 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 TTLL1O95922 423 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 PSAPP07602 524 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 TFAMQ00059 246 aaKnown RBP9.67□□□□□ -0.86
CTNND1-208ENST00000428599 CIAPIN1Q6FI81 312 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 CEP170P1Q96L14 293 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 SPZ1Q9BXG8 430 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 XAB2Q9HCS7 855 aaKnown RBP9.67□□□□□ -0.86
CTNND1-208ENST00000428599 ZNF212Q9UDV6 495 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 KCNA4P22459 653 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 ZNF589Q86UQ0 364 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-208ENST00000428599 ALKBH8Q96BT7 664 aaKnown RBP9.67□□□□□ -0.86
CTNND1-208ENST00000428599 MTRQ99707 1265 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 SLC7A5P2Q9GIP4 190 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 LSG1Q9H089 658 aaKnown RBP9.67□□□□□ -0.86
CTNND1-208ENST00000428599 SLC39A2Q9NP94 309 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 PIM2Q9P1W9 311 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 THEGQ9P2T0 379 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 KIAA1024Q9UPX6 916 aa9.67□□□□□ -0.86
CTNND1-208ENST00000428599 PRKAB2O43741 272 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 RPN1P04843 607 aaKnown RBP9.66□□□□□ -0.86
CTNND1-208ENST00000428599 EEF1GP26641 437 aaKnown RBP9.66□□□□□ -0.86
CTNND1-208ENST00000428599 MAPK4P31152 587 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 TBC1D9BQ66K14 1250 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 EIF2AQ9BY44 585 aaKnown RBP9.66□□□□□ -0.86
CTNND1-208ENST00000428599 KRT82Q9NSB4 513 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 SUFUQ9UMX1 484 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 ARHGDIAP52565 204 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 IL9RQ01113 521 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 KLC3Q6P597 504 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 TTC30BQ8N4P2 665 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 EFHD1Q9BUP0 239 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 COA1Q9GZY4 146 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 TRIM45Q9H8W5 580 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-208ENST00000428599 MID2Q9UJV3 735 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 ZBTB7AO95365 584 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 ESRRBO95718 433 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 CYP19A1P11511 503 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-208ENST00000428599 TCP1P17987 556 aaKnown RBP9.66□□□□□ -0.86
CTNND1-208ENST00000428599 OR6B2Q6IFH4 312 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 KCTD6Q8NC69 237 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 MAP4K1Q92918 833 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 SERPINB13Q9UIV8 391 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 KRT1P04264 644 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 NNMTP40261 264 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 MKRN3Q13064 507 aaKnown RBP9.66□□□□□ -0.86
CTNND1-208ENST00000428599 RASGRF1Q13972 1273 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 DARS2Q6PI48 645 aaKnown RBP9.66□□□□□ -0.86
CTNND1-208ENST00000428599 SEPT8Q92599 483 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 ARHGEF1Q92888 912 aaKnown RBP9.66□□□□□ -0.86
CTNND1-208ENST00000428599 PPWD1Q96BP3 646 aaKnown RBP9.66□□□□□ -0.86
CTNND1-208ENST00000428599 LAMC1P11047 1609 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 LMTK2Q8IWU2 1503 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 POC1B-GALNT4F8VUJ3 575 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 hCG_1984214I3L0E3 225 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 PRPSAP2O60256 369 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 HOXD10P28358 340 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 MECOMQ03112 1051 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 MESDQ14696 234 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 SLC27A3Q5K4L6 730 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 DNAJC24Q6P3W2 148 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 ADAT2Q7Z6V5 191 aaKnown RBP9.66□□□□□ -0.86
CTNND1-208ENST00000428599 ZNF713Q8N859 430 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-208ENST00000428599 GIPC2Q8TF65 315 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 ZC3H15Q8WU90 426 aaKnown RBP9.66□□□□□ -0.86
CTNND1-208ENST00000428599 TEX12Q9BXU0 123 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 PUS7LQ9H0K6 701 aaKnown RBP9.66□□□□□ -0.86
CTNND1-208ENST00000428599 NEUROG2Q9H2A3 272 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 CUEDC2Q9H467 287 aa9.66□□□□□ -0.86
CTNND1-208ENST00000428599 RPF1Q9H9Y2 349 aaKnown RBP9.66□□□□□ -0.86
CTNND1-208ENST00000428599 MRPL47Q9HD33 250 aaKnown RBP9.66□□□□□ -0.86
CTNND1-208ENST00000428599 GOLGA8SH3BPF8 625 aa9.65□□□□□ -0.86
CTNND1-208ENST00000428599 UBXN2AP68543 259 aa9.65□□□□□ -0.86
CTNND1-208ENST00000428599 SPOPLQ6IQ16 392 aa9.65□□□□□ -0.86
CTNND1-208ENST00000428599 TMTC3Q6ZXV5 915 aa9.65□□□□□ -0.86
CTNND1-208ENST00000428599 PPP1R9AQ9ULJ8 1098 aa9.65□□□□□ -0.86
CTNND1-208ENST00000428599 NEMP1O14524 444 aa9.65□□□□□ -0.86
CTNND1-208ENST00000428599 APOEP02649 317 aa9.65□□□□□ -0.86
CTNND1-208ENST00000428599 PFKFB1P16118 471 aa9.65□□□□□ -0.86
CTNND1-208ENST00000428599 ADRA2BP18089 450 aa9.65□□□□□ -0.86
CTNND1-208ENST00000428599 KCTD1Q719H9 257 aa9.65□□□□□ -0.86
CTNND1-208ENST00000428599 RBM46Q8TBY0 533 aaKnown RBP9.65□□□□□ -0.86
CTNND1-208ENST00000428599 CCHCR1Q8TD31 782 aa9.65□□□□□ -0.86
CTNND1-208ENST00000428599 ZNF653Q96CK0 615 aa9.65□□□□□ -0.86
CTNND1-208ENST00000428599 CCDC138Q96M89 665 aa9.65□□□□□ -0.86
CTNND1-208ENST00000428599 KANSL2Q9H9L4 492 aa9.65□□□□□ -0.86
CTNND1-208ENST00000428599 PIDD1Q9HB75 910 aa9.65□□□□□ -0.86
CTNND1-208ENST00000428599 MAGED2Q9UNF1 606 aaPredicted RBP9.65□□□□□ -0.86
CTNND1-208ENST00000428599 CARMIL3Q8ND23 1372 aa9.65□□□□□ -0.86
CTNND1-208ENST00000428599 SASH1O94885 1247 aa9.65□□□□□ -0.86
CTNND1-208ENST00000428599 PDIA3P30101 505 aaKnown RBP9.65□□□□□ -0.86
CTNND1-208ENST00000428599 MSH2P43246 934 aa9.65□□□□□ -0.86
CTNND1-208ENST00000428599 STAT2P52630 851 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms